Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------MYB59                                                        --------->TOE2(3)                                                  --------->TOE2(3)                                                  --------->TOE1(3)                                                --------->SPL7                                                <---------TOE1(2)                                                ------->TEIL                                       --------->YAB1   --------->TOE1(3)                         --------->ZAT14     --------->YAB1                                         -  <---------ALFIN1       <---------ZAT14    --------------->AtSPL8                                  - --------->MYB46(3)      --------->ZAT18    <<<<<<<<<ARR2                               --------->ANAC58 ------>ZmHOX2a(2)       <---------ZAT18    --------------->AtSPL3   --------->ANAC58   --------->ANAC58 --->YAB1----------->HVH21   <----------DOF2<<<<<<<<<ARR1            --------->ANAC58 ---------->DOF2   tgatccaccgcttgacattagaaatagtgcgctcttcttcatcacaatcgtaccttaacctaaaactttggaagcaagactctctgtctaaagccagaaa  29621400                                                                                  <-----------GT1                      <---------YAB1                 <-------TEIL              --------->GLK1(1)                  --------->ANAC58                 <-------MYC2           --------->LBD16              --------->ANAC46                     <-------MYC3     <---------ARR11(3)              --------->ANAC58                  <---------ALFIN1    <---------ARR14(2)              --------->ANAC58<---------HSFB2a(2)  ------->MYC2     --------->ARR11(3) <---------ATHB12 --------->ANAC58           --------->ANAC46       --------->ARR14(2)            --- ----->MYB46(1) ---------->DOF2       --------->ATHB12             <---------CCA1(2)     <----------DOF2 ----->MYB83--------->MYB52(1)--------->HSFB2a(2)  ------->MYC3 <-------TEIL   <---------GLK1(1)  ---   cctatcaacaaaactcacgaaagcattatagtctagaaattgattgtactccacgttcaaaccaggtacatatctccagagatttctccatcttttggat  29621500                                             ----------->HVH21                                           --------->At4g35610     --------->MYB52(2)                               --------->GLK1(1)                 <--------P                              <---------KAN4(2)                 <---------MYB52(1)                              <---------ARR11(3)              <---------HSFB2a(2)                              --------->ARR11(3)           --------->GLK1(2)                              --------->ARR14(2)          --------->ARR14(2)                       <---------ANAC46--------->TOE2(3)  <---------GLK1(2)             --------->MYB46(3)--------->KAN4(1)          <---------ARR14(2)           <-----------GT1    <---------ARR14(2)         <------ZmHOX2a(1)          ------>ZmHOX2a(1) ------>ANAC58       ------>ZmHOX2a(1)<---------ICU4   <---------TOE2(3)        <---------ARR14(2) ------>ANAC58------->GAMYB   ---------->TaMYB80       <---------TOE1(3)        --------->ARR14(2)   aagacactactcttaaccacatccttcgtggggatattcaacattatctgacatattaaggattctggtaagttgctcagcctatcctcttcgcttcttc  29621600           <---------At4g35610   <-------MYC3   <-------MYC2       ------->TEIL   ------->MYC2  ----------->RAV1(2)   ------->MYC3 ------>ZmHOX2a(1)              <-----------HVH21  --------->ANAC58    --------->ARR14(2)    --------->At4g35610  --------->ANAC58   <---------CCA1(2)      <---------At4g35610                                   --- <---------TOE1(2) ------>ZmHOX2a(1)  <-----------HVH21           --------->ANAC46             ------   ttgcacgtttctcatctcctcctgtatccatgttaatctgcatcacagatgtcaaatcagatagaaatactcaacatttgatagaaaaatttcgctagaa  29621700                                                                  --------->At4g35610                                        --------->AHL20(2)   --------->HSFB2a(2)                         --------->ANAC46                --------->bZIP60(1)        <---------ARR11(3)          <------ZmHOX2a(1)    <---------bZIP60(1)        --------->ARR11(3)<---------MYB52(2)      ----------->RAV1(2)       --------->CCA1(1) --------->ANAC58        ------->TEIL<---------HSFB2a(2)                 ----       --------->RVE1(1) --------->ANAC58<---------AHL20(2) <---------ANAC46                   ------ ------>YAB1   <---------AHL20(2) <---------TOE2(3)--------->TOE2(2)                           ------ --->YAB1   <------------CBF     --------->MYB52(1)--------->TOE1(2)             --------->AHL20(2)   tcatacaaaatatctattgaattacacaaggaacctaaggaaataaatctgtacctgcgatgtcgcgaagcagcatgaagaaatcaaatatgaaggctcc  29621800                                          --------->MYB46(3)                                          --------->DEAR3(1)                            --------->ZAT14                                         <---------At4g35610                            <---------ZAT14                             ------>ZmHOX2a(1)                                        --------->ANAC58            *TSS         --------->ARR14(2)              <---------ANAC58             --------->ANAC46       <---------YAB1    <---------ARR14(2)     --------->MYB52(1)                    --------->ANAC58 -->ZmHOX2a(1)           ------->TEIL   <---------At5g28300             <-----------GT1 <---------ZAT18 --->At4g35610      --------->CCA1(2)  <-----------GT1   --------->ANAC55(2)        <---------ALFIN1 ----->RAV1(2)     <----------ID1   <---------GLK1(1)    <---------ANAC58   <-----------GT1   tgaagaagtatgatatatagagagacgaatcctcgtggaattcaccggcccaagggttttcgtaacgcttgttttttctaactgttccactccactagtg  29621900                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                               <-----                                                                                          <---------TCP15(1)                                                                                          --------->PCF2                             --------->DEAR3(2)                                          --------->TCP20                           <-----------GT1                                               --------->TCP15(1)               <---------ZAT18                                                          <---------TCP23               --------->ZAT18                                                          <---------TCP15(2)              <---------ANAC58  ------>MYB46(1)                                       --------->ALFIN1              <---------ANAC58  ------>MYB83       ---------->DOF2                  <-----------RAV1(1)              <---------ANAC46------->GAMYB     ---------->DOF2                 ----------------->AGL1           --------->ALFIN1--------->MYB52(1)  <---------WRKY45         <-----------GT1<---------MYB46(3)   <-----------GT1       <---------KAN4(2)--------->ICU4               --------->AHL20(2)<---------PCF2   gctaataaccagagtggcgcacaatagaataaccgacttgtgtcattagtcaaagaagcgcataatagaacaattaactcgtgcctctgtgggtcccata  29622000                                                                                   <-----------GT1                                                                                <---------ICU4            <------NtERF2                                                      --------->ICU4           ------>NtERF2                                                   <------NtERF2           <---------ATERF1(1)                                            ------>NtERF2          <---------ANAC58                                                --------->RAP2.6(2)          <---------ANAC58                                                --------->LBD16    --------->ATHB12                                                    --------->ATERF1(1)    -------->HAHB4                                                      <------NtERF2    --------->YAB1                                                      <---------LBD16   <---------YAB1                                                       <---------At4g35610 -------->AHL20(2)                                                     <---------ATERF1(1) ---------YAB1             --------------->AtSPL8       <---------ALFIN1--------->At4g35610 ---------AHL20(2)     <---------DAG2                 --------->ANAC46 --------->ALFIN1 ------->AHL20(2)      <----------DOF2          ---------->DOF2        <---------RAP2.3(1)  --------- --------AHL20(2) <---------MYB52(1)        --------->At4g35610    <---------TOE2(3)<---------At5g28300 ----CCA1(2)--------->ATERF1(1)     <-----------HVH21--------->ZAT18  <---------DEAR3(1)<---------ANAC46   ttttaattataggcgcgtcccttaacttttttgtactatgtcaatgggctgaaagcccacaacttaatttaggctgcggcaattgttactgcgtaaaagg  29622100                                                         ------>NtERF2                                                         --------->LBD16                                                        --------->ANAC46                                                <-----------GT1                                             <---------ICU4                                             --------->YAB1--------->DEAR3(1)  ------>NtERF2                                            --------->AHL20(2)                 --------->LBD16                                            <---------AHL20(2)                --------->ANAC58                                            <---------ATHB51------>NtERF2     --------->ANAC58                                            --------->ICU4<----------CDC5     <---------ALFIN1                                           <---------AHL20(1)    ----------------------->TaNAC69(2)  --------->YAB1                        --------->AHL20(2)<------NtERF2       --------->ANAC46  --------->ANAC55(2)                ----------->GT1   <---------LBD16       <---------LBD16  --------->ANAC46                  ----------->GT1 --------->ANAC46      <-----------HVH21 ->DOF2                           --------->ALFIN1--------->ZAT6<-----------ARR10                 <--   ctatacataatgggcctaagcccatatgtatagaaggtgggataaaataattacactcccgccgaggctcttcccttgtcccgcctctctcgctcaaaca  29622200                                                                               <---------ANAC58                                                  <----------DOF2              <---------ANAC58                                               <---------ALFIN1       <---------ANAC58                                             --------->LBD16          <---------ANAC58                                            --------->HSFB2a(2)       <---------ANAC46                                      --------->GLK1(2)           <----------DOF2                                      <-----------ARR10          ------>ZmHOX2a(2)       <--------ATHB1                                 --------->LBD16  <---------DAG2<------ZmHOX2a(2)       --------->ICU4                                --------->HSFB2a(2)            <---------ARR11(3)  <---------HSFB2a(2)           <---------GLK1(1)    <---------HSFB2a(2)        <-----------GT1     <---------ANAC46 --------DOF2                  <---------LBD16<---------ALFIN1 --------->ARR11(3)  --------->HSFB2a(2)   cttttgactagagaaatcggaagaacaaaaatttcccgataatcttccccaactttttttgttacgatctttgcttagatttcgtctggaataattcgat  29622300  Previous    Next  AGI:  At1g78760.1    Description:  F-box family protein. Identical to Putative F-box/FBD/LRR-repeat protein At1g78760 [Arabidopsis Thaliana] (GB:Q9ZV94); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G69630.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 29620067    to: 29621631    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g78770.1    Description:  cell division cycle family protein. similar to SEC (SECRET AGENT), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G04240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39413.1); similar to TPR Domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94847.1); similar to hypothetical protein OsI_010411 [Oryza sativa (indica cultivar-group)] (GB:EAY89178.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide TPR2 (InterPro:IPR013105); Range:  from: 29621812    to: 29626340    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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