Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------ANAC58                                 <---------ANAC58                      <---------CCA1(2)                      --------->TGA2(2)                           <---------DAG2                     <-----------TGA1                          --------->ANAC58                     <-----------HVH21                         --------->ANAC58                    --------->ANAC58                          ------->TEIL <----------DOF2 ---------ZAT18     --------->ANAC58                      <---------------AtSPL3 -------->ZAT14     --------->ANAC46                      <---------------AtSPL8 ---------ZAT14    ------->TEIL  <---------ANAC46         --------------->AtSPL8 -YAB1  <---------REM1(1)<---------At4g35610     <-----------GT1  <----------DOF2      --------->YAB1   tgtgaacttgttgtaactttgaacgtcagcctatggcttgtgtttgacattaaactagataatgtacgcttttctatctttagtctaattcataaaacaa  29601100                                       <---------YAB1                                      <---------At4g35610                                   <---------ARR11(3)                                 --------->ANAC55(2)                                   --------->ARR11(3)                     <---------AHL20(2)------>ZmHOX2a(2)                                 <---------TOE2(3)                       --------->AHL20(2)--------->At4g35610   --------->DAG2            --------->YAB1         ----------->GT1  ---------->ID1   <---------ANAC55(2)  ---------->DOF2          <---------YAB1 ------->TEIL   <---------ANAC55(2)    --------->AHL20(2)   aacaaaaagcttatatatgtttactcactattaataagataatgaatctatgttttgttacataaaactttgtcatttaatataaaatatgtgatctgtc  29601200                    <-------TEIL                                           <----------DOF2                   --------->CCA1(2)                                   <---------GLK1(2)                   --------->ARR14(1)                              <---------At5g28300                  --------->ARR11(1)                              <-----------GT1                  --------->ARR14(2)                       --------->HSFB2a(2)                    ---                  <---------ARR14(2)                       <---------HSFB2a(2)                 <-----           <---------AHL20(2)                              --------->HSFC1(1)             <---------MYB46(3)  --------->YAB1  <---------GLK1(2)                        <---------HSFC1(1)         <---------YAB1   tgtttcatgacattttataagattcgagttctgtttttcattcaattggtaacctgttcttctagaatttacagtttctttacatgttatagttgttaca  29601300                                                                 --------->ARR11(3)                                                                 <---------ARR11(3)                  <---------AHL20(2)                            <---------CCA1(2)                  --------->ARR11(3)                           --------->ARR11(3)      --------->YAB1                                           <---------AHL20(1)      <--------HAHB4                             --------->CCA1(2)      <---------ICU4                            <---------AHL20(1)     --------->ICU4              ----------->GT1<---------AHL20(2)     <---------YAB1<---------AHL20(2)           --------->ARR11(3)    --------->ARR11(3) <---------MYB46(3)   <---------AHL20(2) <---------ARR11(3)    <---------ARR11(3) <-----------RAV1(1) --------->AHL20(2)  --------->AHL20(1)   --------->YAB1 --------->AHL20(1)    --------->AHL20(2)     <---------AHL20(2)   --------->ANAC46  --------->ICU4  <---------AHL20(1)    <---------AHL20(2)  --------->AHL20(2) <---------TCP20    <-- ------>AHL20(2)  <---------ARR11(3)--------->AHL20(2)<---------PCF2           --------->PCF2     <-- ----ANAC55(2)    --------->AHL20(2)<---------AHL20(2)--------->PCF2    <-----------RAV1(1)       <--   taaaatgatcattacaagaatatatttgttgggcttagttaaatatttaatatatgggcccataatatatctatatgttgggctccacaaaatccctatg  29601400                                 ----------->RAV1(1)                                --------->At1g77200                                --------->DREB2C(2)                                ----------->HVH21                                ------->GAMYB                               --------->DEAR3(2)                               <---------MYB55(2)                                                   <                               --------->MYB46(3)                           --------->TOE1(3)       -                              ------>MYB83                      --------->LBD16                ------                              -------->P                       --------->LBD16 ---------->DOF2 ------                              ------>MYB46(1)           <-----------ARR10   --------->TOE2(3) ------- -------ANAC58        <---------ICU4               --------->ANAC58    <---------ICU4         ------- -------ANAC46        --------->ATHB12             --------->ANAC58   <---------YAB1      <---------- -------ANAC58       <---------YAB1       <---------GLK1(2)   <---------LBD16------>ZmHOX2a(1)-------   gcctgataacaaattgaatggtcttcattgccaaccgacagacagagtctgactagcaaaacttcccggtttattattccttaaaccgaaatataccagc  29601500                                                                <---------HSFC1(2)                                                                --------->HSFC1(2) ---------ARR14(2)                                             --------->ANAC58 -------->ARR14(2)                                             --------->ANAC58 >MYB46(1)                                                 --------->ANAC58                <---------ATHB12 >MYB83                                                    --------->ANAC46               ------>MYB46(1) -->ANAC58                                                 --------->ANAC58               ------>MYB83 -->ANAC58                                       --------->GLK1(1)                      --------->MYB46(3) -GT1                                            <---------GLK1(1)                      --------->AtMYB61 -->ANAC46             --------->ZAT18          *TSS  ------>ZmHOX2a(1)              --------->ZAT6   caaattcgactgttcttcatcgatttgcactgtgttgtttctctctcgatgaattcctcccaagcaagcttcttcgacttccctctaacaccaatcgtct  29601600                                                                   <---------ANAC46                                                            ------>ZmHOX2a(2)                                                           <------ZmHOX2a(2)                                                          <---------ARR14(3)                                                          <---------ARR11(3)                                                          --------->ARR14(3)              --------->YAB1                                                          <---------AGP1                 ----------->GT1                                                          --------->ARR11(3)            <---------WOX13(1)                                                          --------->ARR14(2)     ---------->DOF2                                                          <---------ARR14(2) --------->ANAC58            --------->YAB1    <---------HSFB2a(2)        <---------CCA1(2)   --------->ANAC58    ----        <---------YAB1        --------->HSFB2a(2)       ----------->ARR10    <---------ANAC55(2) ----   ggtctcgtttctaattgtaagtcttcttccttctctaagttttgtttcagtgtcaatgtagatcttcttaggtggaatcaagtaaaagagattgataaac  29601700                                              --------->MYB59                                            <--------P                 --------->TOE1(3)         <-------GAMYB                                            <          <---------MYB52(1)             <------NtERF2                                            ---        <---------ANAC58       <---------TOE2(2)                                                 <---        <---------ANAC58      ------>ZmHOX2a(1)                                         <---------YAB1 ----->TOE1(3)   --------->TOE2(3)     <---------LBD16                      <---------AtLEC2   ------ ----->TOE2(3)  ----------->GT1<---------TOE1(2)<------ZmHOX2a(1)        <---------MYB52(1)   -------   cctaattgttccgttctatcgttaaaactttcctagattagtcggggttaggaaacgaagtctagctatgaaaccgttgcatcgaattttgtcatagata  29601800                                                           <---------YAB1         <---------MYB52(1)                              --------->YAB1        --------->LBD16                               ----------->GT1      <---------LBD16                              --------->GLK1(2)    <-----------GT1                                <---------ARR14(2) <---------ICU4                                    --------->ARR14(2) ---------YAB1                                  <---------TOE1(3)                         --------->MYB52(1) ------>YAB1             --------->DEAR3(1)     <---------TOE2(3)                      <---------At4g35610 ------YAB1             --------->DEAR3(2)  <---------ANAC46                     <----------DOF2    < --->CCA1(2)          --------->ARR14(2)    <---------ANAC58                  --------->ARR11(3)    - -->ARR11(1)          <---------ARR14(2)    <---------ANAC58                  <---------ARR11(3)  ---   tgataatttccggttcgcacatcagaaccggccctgtatgcaagtagcttgaggttctgttataatttgttgaagggagagaactttgaagctaatgggg  29601900                           --------->ATHB12                          <---------YAB1                      ------>ZmHOX2a(2)                      ======================HOX2a_HOX2a                     <------ZmHOX2a(2)                     --------->CCA1(2)                     =======================HOX2a_HOX2a                    --------->ARR14(2)                    <---------ARR14(2)                    <---------AGP1                                                            -------                    --------->AGP1                         <---------ICU4                     <------                    <-----------ARR10                     --------->ICU4                      -------                    --------->ARR11(3)               ----------->GT1                          <------                    <---------ARR14(3)       --------->ANAC58      <---------MYB52(1)         <------               <------NtERF2                 --------->ANAC46     <-------GAMYB               <------  --------->MYB52(1)<---------ARR11(3)       --------->ANAC58    <---------MYB46(3)           ------- ---------ARR11(3)  --------->ARR14(3) <---------GLK1(1)  <---------YAB1         ---------->DOF2<---- -------->ARR11(3)----------->ARR10    --------->GLK1(1)--------->YAB1  --------->ZAT18      <------- -------->ARR10--------->At4g35610   <------ZmHOX2a(1) <---------YAB1   <---------ZAT18      <-------   aagataatggaatgggcagcaagatctgatcatttgggaggaattccaaggaatactgtgataatggctgttagtgcatttgcaaaagcagtagcaaatc  29602000  Previous    Next  AGI:  At1g78680.1    Description:  ATGGH2 (GAMMA-GLUTAMYL HYDROLASE 2); gamma-glutamyl hydrolase. Identical to Gamma-glutamyl hydrolase precursor (GGH) [Arabidopsis Thaliana] (GB:O65355;GB:Q8VYT0;GB:Q9ZV86); similar to ATGGH1, gamma-glutamyl hydrolase [Arabidopsis thaliana] (TAIR:AT1G78660.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO39426.1); contains InterPro domain Glutamine amidotransferase superfamily; (InterPro:IPR011702); contains InterPro domain Peptidase C26, gamma-glutamyl hydrolase; (InterPro:IPR015527); contains InterPro domain Peptidase C26; (InterPro:IPR011697) Range:  from: 29598674    to: 29601163    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g78690.1    Description:  phospholipid/glycerol acyltransferase family protein. similar to phospholipid/glycerol acyltransferase family protein [Arabidopsis thaliana] (TAIR:AT3G05510.1); similar to phospholipid/glycerol acyltransferase family protein [Arabidopsis thaliana] (TAIR:AT3G05510.2); similar to B0811B10.1 [Oryza sativa (indica cultivar-group)] (GB:CAH68301.1); similar to OSJNBa0087O24.21 [Oryza sativa (japonica cultivar-group)] (GB:CAE03598.1); contains InterPro domain Phospholipid/glycerol acyltransferase; (InterPro:IPR002123); contains InterPro domain Tafazzin (InterPro:IPR000872) Range:  from: 29601548    to: 29603522    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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