Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <------ZmHOX2a(2)              --------->ARR11(3)              <---------ARR14(2)              <---------ARR11(3)              --------->ARR14(2)    --------->ANAC58    --------->O2------>ZmHOX2a(2)    --------->ANAC55(2)    --------->ANAC46    --------->ANAC58    --------->ANAC55(1)                                                                ------>ZmHOX2a(1)    <---------ANAC55(2)                                                            <-----------GT1 --  <-----------GT1                                   --------->AHL20(2)    <---------ZAT14   --------- >GT1     ---------->DOF2                           <---------AHL20(2)    --------->ZAT14  --------->MYB46(3)   attttcacgtaacaaagatcccttctctgtgtgttttcgccaaaacatagcaatttatattagttactaagagcaatacagtgtttctccttatccacca  29598300                                                                           --------->WOX13(1)                                                                        --------->ANAC46                                                                      <------ZmHOX2a(1)                                                                  --------->ALFIN1                                                                <---------O2                                                                <---------TGA1a                                                                <---------ANAC58           <---------                                   <---------AHL20(2)           <---------ANAC58           <---------ARR11(3)                                   --------->AHL20(2)           <---------ANAC46           <---------ARR14(2)                                  <---------AHL20(2)     <---------ANAC55(2)               --------->ARR11(3)                              <---------YAB1             ----------->RAV1(2) <---------ATHB12     ---              --------->MYB46(3)  --------->AHL20(2)  =======================HOX2a_HOX2a   <---------ARR11(1) ------->ATHB12     --------->ALFIN1                  <------ZmHOX2a(2) --------->ANAC58   --------->ARR14(2) >ANAC46 <---------REM1(1)  --------->YAB1           <---------ARR11(3) --------->ANAC58  <---------CCA1(2)   ttgattgtaagttgtaaccaaggtgttgaactataatttaaaaaaacacagtatagatcacatgaggcgtgaggacgcaatcacttgttcccatatcttc  29598400                                                            <---------ICU4                                                            --------->YAB1                                                           --------->ICU4                                                           <---------ATHB12              ------>ZmHOX2a(1)    <------ZmHOX2a(2)     --------->WOX13(1)              ============================HOX2a_HOX2a --------->ANAC58      --------->TOE2(3)           <---------ARR11(3)  --------->ANAC58      --------->TOE1(3)           --------->ARR11(3) --------->DAG2                       -----------      <---------MYB59    <---------DAG2             ---------->DOF2                     --------->ARR11(3) --ARR10     --------->TOE2(3)---------->DOF2<---------TOE2(3)<---------YAB1           <------ZmHOX2a(1) --->ZmHOX2a(1)          <----------DOF2     <---------TOE1(3)--------->ICU4       ---------->DOF2   ctctaaaacctaaatcctaaaaaatcccttttcaaagatcaagttttaaggcaaaaaagcaatcatgattttggccagacacagcgaaaggaccttgtct  29598500                                       --------->YAB1                                      <---------YAB1                               --------->MYB46(3)                                    --------->YAB1                                --------->ANAC58                             --------->AHL20(2)                                   --------->ANAC58                             <---------AHL20(2)                                  ------->TEIL                            --------->AHL20(2)                                --------->ANAC58                            <---------AHL20(2)                                --------->ANAC58                           <---------YAB1                              --------->YAB1                  --------->YAB1    <---------ICU4                     <---------ICU4                  <---------ICU4--------->AHL20(2)                     <------------ATHB5              --------->AHL20(2)<---------AHL20(2)             ----------->HVH21<---------ALFIN1    <              <---------AHL20(2)--------->AHL20(1)    --------->YAB1  --------->ICU4           <-----             --------->AHL20(2) <---------AHL20(1)   <<<<<<<<<ARR2    <---------ATHB51         ------ ---------->WRI1 <---------ATHB12  <---------YAB1    <<<<<<<<<ARR1    <---------ATHB12    <----------   gtttcgaaaaactcatttaatcatgtgttattaatttattattatcaacaatacaatcgtactgggtgaccaataatgagacgcacccatcaaattgggc  29598600                                                                                            <--------                                                                                            ---------                                                                                          --------->REM1(2)                                                                                        ------->MYC4                                                                                        <-------PIF5                                                                                        <-------MYC3                                                                                        <-------MYC2            <---------ALFIN1                                                            <-------MYC4            --------->AtMYB61                                                           ------->MYC3       ------>NtERF2                                                                    ------->PIF5       <---------ATERF1(1)                                                              ------->MYC2    <---------ATERF1(1)                                                                <-------------   --------->ANAC58                                                                    --------->O2   --------->ANAC46         --------->ANAC46                                           <---------TGA1a   --------->ANAC58         --------->ANAC58                                <---------ARR11(3)  <---------LBD16           --------->ANAC58                        <-------TEIL       <---------ANAC46 <---------ALFIN1       --------->CCA1(2)                    --------->AHL20(2)        <---------ANAC55(2) ---------REM1(2)      <---------ARR14(2)                    <---------AHL20(2)        <---------O2-- ----ZAT18 --------->MYB46(3) ---------->DOF2              --------->YAB1   --------->GLK1(2)      <- --->PCF2<---------ALFIN1<-------TEIL                   <---------AHL20(2)  --------->ARR11(3)------- --CBF<---------TCP20  --------->ARR14(2)              --------->AHL20(2) *TSS         --------->TGA1a   cctccacggctccaccactgagagggatacacgaaagtcgttttacaaaaacacctattaaaaataaatgtgcataaaaatctattaccacgtgtacggt  29598700                                                                                             <-------                                                                                         <----------DOF2     <------MYB46(1)                                                                    ------>ZmHOX2a(2)     <------MYB83                                                                       =============    --------->MYB59                                                                     ============= -ZAT14                                                                               <---------ARR11(3) >SPL7<---------GLK1(2)                                                        ------>ZmHOX2a(1)    - -----SPL14                                                                    ====================== ------->ICU4                                                                  ====================== --------YAB1                                                        <-------TEIL     --------->ARR11(3) ---->GT1 --------->HSFB2a(2)      --------->ALFIN1             ---------->DOF2================HOX2a_HOX2a   gaagattaggttctcgattttgtataagaaggtcgaagtgtgaagaaatcaaaaacccaaaatcgtgaaagttcatttctcctccattgatctttcttta  29598800     <----------DOF2    =============HOX2a_HOX2a    ===================HOX2a_HOX2a    ------>ZmHOX2a(2)   ==============HOX2a_HOX2a   ====================HOX2a_HOX2a   <------ZmHOX2a(2)  --------->ARR14(2)                                --------->At4g35610  <-----------ARR10                                 <---------At4g35610  --------->ARR11(3)                            <------MYB46(1)  <---------ARR14(2)                           <---------AtMYB61  --------->AGP1<---------At4g35610           <---------MYB52(1)                 <---------ICU4  <---------AGP1------>ZmHOX2a(1)         <---------DOF5.7(2)                   <---------YAB1      <  <---------ARR11(3)                  <------MYB46(1)                         --------->YAB1        - <---------CCA1(2)                    <---------MYB46(3)                     <---------YAB1         < ---DOF2  ------>ZmHOX2a(1)           <------MYB83<--------P          <------ZmHOX2a(1)           --- ======================HOX2a_HOX2a <---------MYB52(1)               <---------TOE2(3)          ------ ================HOX2a_HOX2a    <-------TEIL <-------GAMYB      <----------DOF2 --------->ICU4------- ---------->ARR10            <---------At4g35610<---------MYB46(3)  <---------TOE1(3)         <------NtERF2 =========HOX2a_HOX2a        --------->At4g35610<------MYB83  <---------------AGL15          <------- ==========HOX2a_HOX2a   --------->ALFIN1 <---------At5g28300 --------------->AGL15         <--------   ctcagatctttcctcttcctctgagatgtggagctacgtttggttaccgttggtagctctatctctctttaaggatagcatcataatggccaaggctgcg  29598900                                                                   ------->TEIL                                                              <------ZmHOX2a(2)       ------>ZmHOX2a(1)                                     --------->ARR14(2) ---------GLK1(2)                                            <---------ARR14(2) -------->ARR14(2)                           <---------MYB52(1)------>ZmHOX2a(2) ---------ARR14(2)                 --------->HSFB2a(2)--------->ZAT2 <---------MYB59 -------->ARR10                    <---------LBD16    <---------At4g35610             <---------MYB46(3) ----->HVH21           <---------ARR14(2) <---------LBD16  --------->LBD16          <---------MYB52(1) -->ATERF1(1)          --------->ARR14(2) --------->ZAT18<---------LBD16        --------->MYB52(1) --ATERF1(1)         --------->LBD16    <---------SPL7--------->At4g35610  <-----------GT1 -DEAR3(1)         <---------LBD16 <---------HSFB2a(2)<---------ZAT2 --------->TOE2(3)--------->ATHB12   acgattctcctccctagtcaaaccggatttgatatttctcggagtccggtatgctctgctccggatccgaacctaaattacagaccggttattggtattc  29599000                                                                                                   --                                                                                                   <-                                                                                                   --                     <-----------RAV1(2)                                                           <-                    <---------MYB52(1)                                                             <-                   <-----------HVH21                                                               --                  <---------ANAC58                                                                 <-                  <---------ANAC58                                                                 --                 --------->SPL7                                                                   <--                 <-------TEIL                                                                     ---                --------->ALFIN1                                                                  ---              <---------DEAR3(2)                                     <---------TOE1(2)            <--             <---------DEAR3(1)                                   <---------ANAC46                <--            <------NtERF2                                    <---------RAP2.3(1)                  ===            --------->ATERF1(1)                             <---------RAP2.6(2)                   ---           ------>NtERF2                                    <---------ANAC46                     ----          <---------ETT(2)                                  <---------ANAC58               --------->ALFIN1          <---------DEAR3(1)                                <---------ANAC58             <---------ANAC46          ----------->HVH21                                 <---------RAP2.3(2)         <-----------RAV1(1)          --------->ETT(2)                                 <---------LBD16      --------->ZAT2  <----       ------>ZmHOX2a(1)                                   --------->RAP2.6(3)  <---------At4g35610<-     ----------->RAV1(2)                             ------>ZmHOX2a(1)          --------->At4g35610--   tgagccatcctggcgacggtgcgtcaggtcgtttgagcaatgctacagacgcgtcctccattgcggcttcgtatgtgaaattagctgagtctggtggagc  29599100      ------>ZmHOX2a(2) ----->PIF5 ------PIF5 ----->MYC4 ------MYC4 ------MYC2 ----->PIF4 ------PIF4 ----->MYC3 -------O2 ------>O2 ------>TGA1a -------TGA1a   --------->TOE2(3) -------ANAC55(2)                              --------->ARR14(2)     --------->GLK1(2) ==========================bZIP_DOF         <---------TOE2(3)        <---------GLK1(2) ------>ANAC55(2)       ------->TEIL        <---------TOE1(3)        --------->ARR14(2) -------->OsbHLH66 <---------DOF5.7(2)     <-----------RAV1(2)       <---------ARR14(2)            -- --------OsbHLH66--------->DOF5.7(2)    <----------DOF2          --------->At4g35610              <-- ------MYC3     <----------DOF2       <---------------AGL15      <---------At4g35610           ------ ----->MYC2<---------ATHB12        --------->GLK1(2)           <-----------RAV1(2)   >>>>>>>ZML2  <--   acgtgtgatcccactcatctttaacgagcctgaagaaattctctttcaggttactctcattttgctcagccgattctgtaatctgttctagcttaagaat  29599200  Previous    Next  AGI:  At1g78670.1    Description:  ATGGH3 (GAMMA-GLUTAMYL HYDROLASE 3); gamma-glutamyl hydrolase. similar to ATGGH1, gamma-glutamyl hydrolase [Arabidopsis thaliana] (TAIR:AT1G78660.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO39426.1); contains InterPro domain Glutamine amidotransferase superfamily; (InterPro:IPR011702); contains InterPro domain Peptidase C26, gamma-glutamyl hydrolase; (InterPro:IPR015527); contains InterPro domain Peptidase C26; (InterPro:IPR011697) Range:  from: 29595838    to: 29598392    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g78680.1    Description:  ATGGH2 (GAMMA-GLUTAMYL HYDROLASE 2); gamma-glutamyl hydrolase. Identical to Gamma-glutamyl hydrolase precursor (GGH) [Arabidopsis Thaliana] (GB:O65355;GB:Q8VYT0;GB:Q9ZV86); similar to ATGGH1, gamma-glutamyl hydrolase [Arabidopsis thaliana] (TAIR:AT1G78660.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO39426.1); contains InterPro domain Glutamine amidotransferase superfamily; (InterPro:IPR011702); contains InterPro domain Peptidase C26, gamma-glutamyl hydrolase; (InterPro:IPR015527); contains InterPro domain Peptidase C26; (InterPro:IPR011697) Range:  from: 29598674    to: 29601163    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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