Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        ------>MYB46(1)                                                                      --------->MYB52(1)             >>>>>>>>>TBF1                                            ------>MYB83    <---------ALFIN1           ----------->GT1                   <-----------GT1   --------->ZAT18            <---------TOE2(3)            ----------->GT1 ------>NtERF2                --------->DAG2      --------->AHL20(2)<---------MYB59                 < --------->PCF2       <---------ANAC46          --------->AHL20(2)  --------->AtMYB61              <-   cgaggcccactggaagaagaagtggattgtataaggtgaaacactcactaaaaaatatagatagtataaaccaaaccgaaattttggctacttcatttcg  29587400                                                      <---------SPL7                                                     <---------ANAC58                                                     <---------ANAC58                                                     <---------ANAC46                                                  <---------ARR14(2)     ------>MYB83                                            -------->HAHB4             <---------MYB111(2)                                            --------->YAB1             --------->AtMYB61      <---------ANAC46                     --------->ICU4              <---------MYB46(2)      <---------ANAC58                   --------->YAB1<---------MYB52(1)------>MYB46(1)      ----------->GT1                  --------->AHL20(1)              <---------MYB111(1)      <---------ANAC58                 --------->AHL20(2)              <---------MYB55(2)     <---------MYB46(3)          ----------->GT1  --------->ARR14(2)   --------->MYB46(3)           - --------->ATHB12             --------->ICU4<---------ICU4            --------->ANAC46             -- ---------AHL20(2)          ---------->DOF2<---------YAB1          --------->MYB46(3)        <------- ---------DOF2         ---------->DOF2--------->YAB1<-----------------------TaNAC69(2)       <-------   gttttattgggtgaaaccgatggccaaaaggaaagatgaaaaataataatcggttccgttcgattcgaaaccaccaaaccaatattgtattctaacttta  29587500                        <---------AHL20(2)                       <---------AHL20(2)                       --------->AHL20(2)                    ------>MYB83                    ------>MYB46(1)             --------->HSFB2a(1)             <-----------GT1             <---------HSFB2a(1)  <---------ICU4            <---------------AtSPL8--------->ATHB12            --------------->AtSPL8-------->ATHB1                                     <<<<<<<<<MYB2 -------->LBD16   <---------MYB59<---------ATHB12                                  <------MYB83 ------->ANAC46 ------->TEIL     --------->ICU4   <---------DAG2                   <------MYB46(1) --DAG2     <---------KAN4(2)    <---------YAB1   <----------DOF2          --------->DEAR3(2) ---DOF2  <------ZmHOX2a(1) --------->YAB1<---------ICU4<<<<<<<<<<GT-3b   ------->TEIL   tccgaaattataggaatgtaccaaatttaatcgaaatcattgaaaaattacactttatttttcttacaataaactgaaccgaagttggttttcagttcca  29587600                                                      --------->ZAT18                               <                                                      <---------ZAT18                              <-                                                   --------->ANAC58                             -----                   --------->HSFB2a(2)             --------->ANAC58                             <----                   <---------HSFB2a(2)      <---------------AtSPL8            --------->YAB1   ------        <---------GLK1(2)      <-----------GT1     --------->ANAC46  --------->YAB1          <-------   aatggaaaccgaatttcaattctagaccccaaaatactattcgaagaatgtacaagcccactaagaacaaataatagcaataagaagatggctctcgcgg  29587700                            --------->MYB52(2)                         ------->MYC3                         <-------MYC3                        <---------O2   ===============================MYC_MYB   ------->GAMYB        <---------TGA1a ------>MYB46(1)        --------->O2------->PIF5 -------->P             --------->ANAC55(2)                                                         - =================================MYC_MYB                                                           - ------>MYB83           <---------ANAC46                                                           -- >>>>>>>>>MYB98         <---------ANAC55(2)               --------->AtMYB61                        -- ---------ALFIN1        --------->TGA1a      ------------>CBF                                     --- --------ALFIN1  <-----------TGA1   <-------PIF5          ------->GAMYB----------->HVH21        ----- ->NtERF2        <-----------HVH21 --------->ANAC58       <---------ALFIN1                      <---- --NtERF2       --------->ANAC55(2)--------->ANAC58      --------->MYB46(3)                    ------ --->DEAR3(1)   <---------ANAC55(2)--------->ATERF1(1)--------->MYB46(3)                       <----- --LBD16--------->YAB1  ==========================================MYC_MYB              <----------DOF2   cccaacccaaacaaaatcgcgtcatcacgtgagtggcacgggcctacagcaattccacaaccacatcgaatcgatgacatttccatttgctttaagaaca  29587800     --------->LBD16   <------NtERF2   --------->LBD16   ------>NtERF2  --------->DEAR3(1) <---------DEAR3(1) --------->ATERF1(1) -------->LBD16 ----->NtERF2         *TSS   --------->MYB46(3) ------->ANAC46   <------NtERF2                          <---------ARR14(2) ----->GAMYB      ----------->GT1                        --------->GLK1(2)                        --- ------>MYB46(3) --------->LBD16                    ------>MYB83                    <---------ALFIN1 ---->ARR14(2)  <---------ANAC46                    ------>MYB46(1)     ---------->DOF2          <--- -----ARR14(2)  <---------ANAC58               <-----------GT1   <---------GLK1(1)<---------ALFIN1<-- --->HSFB2a(1)  <---------ANAC58     <---------HSFB2a(2) --------->ARR14(2)    --------->PCF2-------- ----HSFB2a(1) <---------LBD16       --------->HSFB2a(2)<---------CCA1(2) --------->ICU4     --------   tccgccgcgcgagaactggcgggaaaattcagccatcgcctcgaagaaaaaacctcccaaatctgagaaatcggaaaagatgacccacaccgaaacccta  29587900                                                                        --------->HSFB2a(2)                                                                        <---------HSFB2a(2)                                                                       <---------LBD16--------->AHL20(2)                                                        --------->GLK1(1)            <---------AHL20(2)                                                        <---------GLK1(1)       ------>ZmHOX2a(1)  --------->At4g35610                       ----------->GT1          <---------ARR14(2) ------>ARR14(2)                     <---------------AGL15       <-----------------AGL3 ------CCA1(2)                       ==============================================MADS_MADS -------ARR14(2)                   --------->At4g35610 --------->ARR14(2)      --------->TOE2(3) ->TOE2(3)          <----------DOF2<---------At4g35610 <---------ARR14(2)      --------->TOE1(3)<---- ->TOE1(3)  <<<<<<<<<<GATA-1    <------ZmHOX2a(2)<---------WOX13(1)  --------->ARR14(2)<-----------GT1   aatctgctcgatgaaatcgagtcttttgtctccgatcagcttcaagtggtaattgccgatttccttctccatttctggattccttaatttaactagttag  29588000               --------->ZAT14                         --------->At4g35610               <---------ZAT14                       --------->YAB1          <---------GLK1(1)       --------->GLK1(1)                            <---------YAB1 <---------AHL20(2)     <---------YAB1       <---------GLK1(1)                          --------->YAB1<---------ZAT6       --------->HSFC1(2) -----TOE1(3)--------->ANAC46                 --------->AHL20(2)----------->GT1      <---------HSFC1(2)   ggttcttcgatttccacttcagtgattctaaaatttgtcgaaactcgtttatttatcatcggaatagagttaattgttgaattctgaagcttctgattgt  29588100                                                                                              <------                                                                                              -------                                   ----------->GT1         <-----------GT1                   --------                  =============HOX2a_HOX2a           <------MYB83                         <---------TOE1(3)         <---------ZAT6    <---------DEAR3(1)        ----------->GT1                     <-----------RAV1(2)  <-------GAMYB   ------>ZmHOX2a(1)<---------ANAC55(2)    <---------YAB1            <------MYB83 --------->MYB52(2)     ------>ZmHOX2a(2)            <------MYB46(1)             <---------MYB52(1) <---------MYB46(3)    <------ZmHOX2a(2)        --------->ATHB12   <---------GLK1(2)<------MYB46(1)   agtttgttgttgtgttagtcctgagatcggaggtgttatgtaaaatcgagtcatttggttataactactgattcgctcaatccatttggtttcaggtatc  29588200                                                                                           ----------                             --------->YAB1                                                <---------                          <----------DOF2         <-------TEIL                            <----------                      ---------->ID1           ----------->GT1            --------->At4g35610                 <---------HSFC1(2)--------->ARR14(2)                     <---------At4g35610 ---ARR11(3)     <---------HSFB2a(1)          <---------------AtSPL8    <------ZmHOX2a(1)--------->At4g35610 -->ARR11(3)     --------->HSFB2a(1) --------->RAP2.6(3)        ===================================== ->GLK1(1)       --------->HSFC1(2)<---------ARR14(2)           <---------------AGL15    <---------At4g35610   ttacaaatggctgagtcgaaatttctcgctttcatcaaatacggccaagaggtacattgttccattctctattaggagctcattagagtttagctacaaa  29588300  Previous    Next  AGI:  At1g78650.1    Description:  POLD3. similar to unnamed protein product [Vitis vinifera] (GB:CAO39425.1); contains domain PTHR17598:SF3 (PTHR17598:SF3); contains domain PTHR17598 (PTHR17598) Range:  from: 29587822    to: 29590534    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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