Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        ------>ZmHOX2a(2)                                   <-----------HVH21                                 <------ZmHOX2a(2)                                  <---------ANAC55(2)                               --------->ARR11(3)                            <--------P                                              <---------ARR11(3)                          <------MYB83                                             --------->GLK1(1)                          <------MYB46(1) --------->GLK1(2)              <----------DOF2                   --------->REM1(2)<---------MYB52(1)              <-----------GT1<---------GLK1(1)                  --------->ALFIN1<---------ANAC46         ------>ZmHOX2a(1)  ---------->DOF2                 ------->MYC3  --------->ARR14(2)          =================================HOX2a_HOX2a                 <-------MYC3  <---------ARR14(2)          ==================================HOX2a_HOX2a   gtgtcttcttgatggtccatgtgtagggaggtagttccgtcaagactctggttcccttctcctctactattttctctttcgaaagagatctcatcttctt  29586500                                                                                                <----                                                                                                -----                                                                                              <------                                                                                            =========                                                                                            ------>ZmHOX2a(2)                                                                                           <------ZmHOX2a(2)                                                                                           ==========                                                                                          --------->ARR11(3)                                                                                    <---------ARR14(2)                                                                                 <---------------AGL15                                          <<<<<<<<<<<<<<<<<LFY                  ----------------->AGL2               ----------->GT1          <---------MYB52(2)       <---------MYB46(3) --------->ARR14(2)         --------->ARR14(2)            --------->ANAC46         <--------P---------->DOF2 <---------ARR14(2)         --------->ARR11(3)            --------->ANAC58        <-------GAMYB    ----------------->AGL3         <---------ARR11(3)      ------>ZmHOX2a(1)           <---------TOE2(3)  --------->LBD16<-----        --------->CCA1(1)      <---------ANAC58        <---------YAB1   ------>ZmHOX2a(1) --------->ARR14(2)        --------->RVE1(1)      <---------ANAC58      <---------AHL20(2) ===========================HOX2a_HOX2a      --------->YAB1           <---------ANAC46     --------->ICU4     --------->TOE2(3)  <---------ARR11(3)     <---------YAB1  <---------ARR11(3)--------->ANAC58<---------TOE2(3)==========================HOX2a_HOX2a <----------DOF2     --------->ARR11(3)--------->ANAC55(1)   <---------TOE1(3) <-----------------AGL1   aaactttataatatcttcagttaaatctttgtttcctgcacaagtaacattggaattaatattagggttgtttcctaaaatccccatatagggatctacg  29586600                               --------->ANAC58                     --------->LBD16                    <---------ANAC58                --------->ARR14(2)                <---------ARR14(2) --------->ANAC58   <---------ANAC58                                  <------ZmHOX2a(1)             - --------->ANAC58  <---------LBD16                                  <---------TOE2(3)              -- -----LBD16    <------ZmHOX2a(1)                                 --------->CCA1(2)                 <- ---->LBD16    --------->HSFB2a(1)        <-----------HVH21     --------->ARR11(3)                 -- ---LBD16    <---------TOE1(2) --------->ANAC58              <------NtERF2                     <----- =====================HOX2a_HOX2a   <---------ATHB12        --------->LBD16 <---------ETT(2)   ------ =====================HOX2a_HOX2a   --------->ICU4         --------->DEAR3(1)            <---------ALFIN1 ----ANAC46 --------->LBD16--------->MYB52(1)             <---------LBD16   --------->ETT(2)  <------   gggaagcctttctccgaggattccgcgtctaacgagcaatgagtcgtcaagtcttccttcgccggagatttaggaacgtcgacaataggcatcaccgttt  29586700        ---------->DOF2   --------->ARR14(2)   <---------ARR14(2) -------->TOE1(1)                                                                                   < ------->LBD16                                                                          --------->CCA1(2) --------LBD16                                                                         <---------ARR11(3) ---->ZmHOX2a(1)                                                                       --------->ARR11(3) ----ARR14(2)              --------->AHL20(2)    <-----------RAV1(2)                <------NtERF2   < --->ARR14(2)           --------->ANAC46      <------ZmHOX2a(1)                   <---------DEAR3(1)< ---MYB52(1)     <------ZmHOX2a(1)  ------------------>SPL14                    <-----------HVH21  <-   cctcggattccaaagaagaggactccacataaattgttcttccgaacaggaccaggtatacagttttttgttcttccttcttcgtcggagatatagaaac  29586800                                --------->ANAC58                                --------->ANAC58                            ------>ZmHOX2a(2)                           <------ZmHOX2a(2)                          --------->ARR14(2)                          <---------ARR14(2)                        --------->LBD16                      <---------At4g35610                      --------->LBD16                      <---------LBD16 ------MYB83         <---------ANAC46 ---------MYB46(3)  <---------LBD16 ------MYB46(1)   --------->ARR14(2)                  --------->GLK1(1) --------DEAR3(1) <---------ARR14(2)                  <---------GLK1(1)  ------>NtERF2           ----   gttggtgagaggtattgctgtttccgcggatcccaaggaaacgttgttctcatgagaaatctctcgctgttcttcggccataactcttcttcgactgaga  29586900                                      --------->YAB1                                      --------->AHL20(2)                                      -------->HAHB4                                     <---------YAB1                                   <---------ICU4                                   --------->YAB1                                  <---------AHL20(2)                                  <---------ATHB51     <-----------------AGL3       --------->AHL20(2)       <---------GLK1(2)               ----------    --------->At4g35610     --------->SPL7           --------->ANAC58           <---------WOX13(1)  <------ZmHOX2a(1)       <---------SPL7      ---------->DOF2                  <------------CBF<----- ----->CCA1(2)<------ZmHOX2a(1)   --------->ICU4     --------->ANAC58    ---------->DOF2 <---------ZAT14   tttaggagcttaattaggagagagttatcgtccgaaataattatagagaaaagactcgaaagattatttgtgagtaaaagggattgatgagagtagtata  29587000                                                                               ------------>CBF                                                                          --------->AHL20(2)                                                                          <---------AHL20(2)                                                                          <---------AHL20(1)                                                <------MYB83              --------->AHL20(1)                    <---------TOE2(3)           ----------->GT1        <---------ICU4                 --------->CCA1(2)         ------>MYB46(1)             --------->AHL20(2)                --------->ARR11(3)         ------>MYB83                <--------ATHB1             <---------TOE2(3)           <---------MYB59               <---------AHL20(2)           <---------WRKY12             <-----------------AGL1         --------->ATHB51           <---------WRKY38(1)          <-----------------AG          <---------ATHB51     --------->MYB52(1)                 ----------------->AGL1        --------->ICU4 ->GT1   <-----------HVH21     --------->ICU4   <------MYB46(1)       <---------ATHB12 ------TBP--------->WRKY18(1)  <---------YAB1  --------->MYB59      --------->YAB1   tatagaagaacggtcaaggatataggttttgtaatgaataagacctaatttggtcaaaactctatccccctaataatttattccaatagaaaatcgtatt  29587100                                                                                 <---------AHL20(2)                                                                                 --------->ICU4                                                      <---------TOE2(3)  --------->MYB52(1)                                          ------->GAMYB<-----------RAV1(1)       <---------YAB1                                         <---------MYB52(2)             <---------ATHB51          <---------GLK1(1)              --------->MYB46(3)             <---------AHL20(2)          --------->ARR14(2)   <---------YAB1      <---------AHL20(2)  --------->AHL20(1)          --          --------->GLK1(1)<---------AHL20(2)    <---------YAB1       --------->YAB1    --------->TOE1(2)   ttttgttcgcagaattctcttccacatatttttatgtttctcaacaaacttatttttatgttgatcaacaaaaaataatggatattattacatgggagaa  29587200                                  <---------MYB52(1)                               <---------TOE1(2)              <---------O2                         --------->At4g35610                  <---------TGA1a               --------->CCA1(2)  --------->DOF5.7(2)         --------->TGA1a              --------->ARR11(3) --------->TOE2(3)            <---------ANAC46              <---------ARR14(2) --------->TOE1(3)            --------->O2        <---------LBD16  --------->ZAT2                    --------->ANAC46         --------->ANAC46    --------->GLK1(2)  <------ZmHOX2a(1)                 --------->YAB1             --------->ANAC58 --------->GT1<---------ARR11(3)----------->GT1<-----------GT1----------->GT1       --------->ANAC58   atggaaattctctggagatattggaggagctcgaacgttaatctgcaattttcagtttatcacgacgtgaaatttgaaatagactcacacaactagtcta  29587300                                                                      ------>MYB83                                                                      --------->MYB52(1)             >>>>>>>>>TBF1                                            ------>MYB46(1)    <---------ALFIN1           ----------->GT1                   <-----------GT1   --------->ZAT18            <---------TOE2(3)            ----------->GT1 --------->PCF2               --------->DAG2      --------->AHL20(2)<---------MYB59                 < ------>NtERF2        <---------ANAC46          --------->AHL20(2)  --------->AtMYB61              <-   cgaggcccactggaagaagaagtggattgtataaggtgaaacactcactaaaaaatatagatagtataaaccaaaccgaaattttggctacttcatttcg  29587400  Previous    Next  AGI:  At1g78640.1    Description:  similar to transcription factor [Arabidopsis thaliana] (TAIR:AT2G33720.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65857.1) Range:  from: 29584608    to: 29586881    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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