Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->ANAC58                                                              --------->ANAC58                                   <-----------GT1        <---------HSFB2a(2)                           <---------YAB1                 <---------HSFC1(1)                        <---------AHL20(2)                --------->HSFB2a(2)                        <---------AHL20(1)               ------>ZmHOX2a(2)                        --------->AHL20(2)              --------->CCA1(2)                   --------->AHL20(2)                   <------ZmHOX2a(2)                   --------->AHL20(1)                  --------->ARR14(2)                   <---------AHL20(1)                  <---------ARR11(3)                  --------->AHL20(2)                   --------->ARR11(3)         <---------At4g35610  <---------YAB1           --------->AGP1         --------->At4g35610 --------->AHL20(2)        <---------ARR14(2)           <---------ICU4    <----------DOF2<---------AHL20(2)                  <---------AGP1      --------->At4g35610   <--- ------>ANAC46<---------YAB1 <---------AHL20(2)    ---------->DOF2    ---------->DOF2    <-----------GT1 ------>WOX13(1)  <---------AHL20(2)  <----------DOF2 --------->RVE1(1)    ----------->GT1  <--------   cagtcactttcagcttataattttattttatttttataaacttttctcttcttaaaagatctagaagcaaaaaaaagagctaaaaatcatttttcttttc  29571700                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               <-----                               <---------YAB1                  ------>ZmHOX2a(1)             <-------                   --------->ARR11(3)                        --------->At4g35610       <---------ARR11(3)         ------>MYB46(1) <---------YAB1                      ----------->RAV1(2)       <---------GLK1(2)         ------>MYB83------>ZmHOX2a(2)            ---------->DOF2    --------->YAB1    --------->ARR11(3) -------DOF2       <---------ARR11(3)           --------->At4g35610  <---------ICU4  <---------TOE2(3) --DOF2<---------MYB59<----------DOF2           <---------At4g35610 --------->ICU4-------------------   ttttggggacctaatatttgtgatcttttgattacaatacagcttgagacagcaaagacggtctcctgcaattaagacacttgtatttagatttttcacg  29571800   >>>>>>>>>>>>>>>>>LFY ---MYC2 -->MYC2 ---MYC3 -->MYC3 --->TGA1a ----TGA1a                                                                       <---------ALFIN1 --->ANAC55(2)                                 <----------DOF2                  --------->MYB46(3) ----ANAC55(2)                           --------->ARR11(3)                    ------>NtERF2 ----ANAC58                              <---------ARR11(3)                   <---------ALFIN1 ----ANAC58             --------->ZAT14 --------->RVE1(1)                     --------->ANAC46 <----- --->O2    --------->ZAT14              --------->CCA1(1)                  --------->ANAC46    ------ ----O2    --------->ZAT18          <---------AHL20(2)                    -------->P<----------DOF2 ----GT1   <---------ZAT18          --------->AHL20(2)                   <-----------GT1       <----- ---->TaNAC69(2)--------->YAB1    --------->YAB1   <-----------GT1    <-----------ARR10        ------   tgtctatccattgttcactcatatactatagtctaaaaataaatatctccttttaacgccttcatatttctaaatctaccccaccactttcaaatagtgc  29571900                              --------->HSFB2a(1)                              <---------HSFB2a(1)                             --------->ARR11(3)                     <---------YAB1   --------->MYB46(3)                             <---------ARR11(3)                     <---------AHL20(2)                            <---------GLK1(1)           <---------AHL20(2) <---------CCA1(1)                         --------->ANAC58          --------->AHL20(2)     <---------ARR11(3) ----ZAT18               --------->ANAC58 <-----------GT1<---------YAB1   --------->ARR11(3) --->ZAT14           --------->YAB1 ------>ZmHOX2a(1) <---------YAB1--------->AHL20(2) ----ZAT14          <---------YAB1 --------->TOE2(3)<---------AHL20(2)   --------->YAB1          <--- --->ZAT18 <----------DOF2  --------->GLK1(1)--------->ZAT6 <-----------GT1<---------RVE1(1)     ----   actgagaccctctcttttttttttgataagaaatcttcctaaaattaccactatttattattttactaatataaatgatattttccaacaacgacttatc  29572000                       <---------AHL20(1)        <-----------GT1                       <---------AHL20(2)        --------->YAB1          -------->HAHB4               --------->YAB1          --------->ATHB12             --------->AHL20(2)                   ---------->DOF2         <---------ATHB12             --------->ICU4       --------->At4g35610 --------->GLK1(1)     --------->AHL20(1)     --------->YAB1         --------->YAB1 <---------GLK1(1)     --------->AHL20(2)     <---------ICU4 ----------->HVH21 ------HSFB2a(2)      --------->AHL20(2)     <---------AHL20(2)     --------->AHL20(2)         <----- ----->HSFB2a(2)      <---------AHL20(2) <---------YAB1    <---------At4g35610  *TSS          -------   tagaaatccaaatgattcaactaattttatttagtcagaaattataaataatcacattttccgatgacaaataaaaatcaaagaagttgacaacaacaac  29572100                                                                     ---------->DOF2                                                                --------->TOE1(3)                                                                --------------->AGL15    --------->GLK1(2)                                         --------->TOE1(3)      <---------DAG2          <---------GLK1(2)                                         --------->TOE2(3)      --------->TOE2(3)       <---------ARR11(3)                                     ---------->DOF2          ------->TEIL              --------->ARR11(3)                           <---------ANAC58                   -------->P           --------->HSFB2a(2)                 --------->TOE1(2)--------->TOE2(3)          <-----------GT1       <---------HSFB2a(2)      ---------->DOF2      <---------ANAC58               <-----------GT1   <---------ANAC58      <-- ----------------WRI1      <---------ANAC46             <---------AHL20(2)  <---------ANAC58   ------ ---->RAV1(1)    --------->TOE2(2)--------->TOE1(3)    --------->AHL20(2)   <---------ANAC46  <------   aaaaaatccaaagagaaaacgtatgagttgcttaaaccataaacctcaagctcaaaattttatcaaccttataaagtttcgttttctcgagattttgaat  29572200                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                 ====                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                               ------                                                                                            <------NtERF2                                                                                            ---------                                                                                          <---------ANAC46                                                                                         <---------LBD16                                                                                         --------->RAP2.3(1)                                                                                         --------->ATERF1(1)                                                                                         <---------At4g35610                                                                                         <------NtERF2                                                                                         --------->At4g35610                                                                                        <---------RAP2.3(1)                                                                                        ------>NtERF2                                                                                        <---------ORA47(2)                                                                                        <---------ATERF1(1)                                                                                        <---------RRTF1(1)                                                                                        <---------DEAR4(2)                                                                                        <---------ERF1                                                                                        <---------RAP2.6(1)                                                                                       <---------DEAR3(1)                                                                                       <---------RRTF1(2)                                                                                       <---------RAP2.3(2)                               <----------DOF2                                         <---------DREB2C(2)                            <---------ANAC58                                           --------->ATERF1(2)                            <---------ANAC46                                           --------->ALFIN1                      <---------DAG2                                                   <---------RAP2.6(2)                      <----------DOF2                                                  <---------RAP2.3(3)               <------ZmHOX2a(2)   <---------HSFB2a(2)               <---------ANAC46  <---------RRTF1(3)    --------->At4g35610     <---------ANAC58                      --------->GLK1(2)    <---------ATERF1(2)    <---------At4g35610    ---------->ID1                        --------->ARR14(2)   --------->ATERF1(1) --------DOF2 <---------ARR11(3)   --------->HSFB2a(2)         <---------YAB1         <---------ABI4(1) ->TEIL   ---------->DOF2 <-----------GT1      <---------TOE2(3) <---------ARR14(2)  <---------ATERF1(1) ---CCA1(2)   --------->ARR11(3)  <---------LBD16 --------->CCA1(2)<-------TEIL      <---------bZIP60(2)   cttttcagctaaaaaagatcacagctttttgcgttttctggatgagtttgagataagagaagatgaagattcagtgtaacgtttgtgaggcggcggaagc  29572300                  ====================bZIP_DOF                ------>NtERF2               ----------->HVH21               --------->RAP2.3(2)               --------->At1g77200               --------->DEAR3(1)               --------->DREB2C(2)              --------->RAP2.3(1)              --------->ATERF1(1)              --------->ERF1              <------NtERF2              --------->ORA47(2)              --------->DEAR3(2)       <-----------RAV1(1) -------->HSFC1(2)--------->O2 -------->HSFB2a(1)      <---------At4g35610 ---------HSFC1(2)<---------O2 ---------MYB46(3)====================bZIP_DOF ---------DEAR3(2)--------->TGA1a                            ------>NtERF2 --------DEAR3(1) <---------TGA1a                            <---------At4g35610 ===========================MYC_MYB                         --------->RAP2.6(2) -------->AtMYB77<------NtERF2 <-----------RAV1(1)         --------->RAP2.3(1) ----->MYB52(1)--------->RAP2.3(3)    <---------ANAC58   --------->ANAC58    <------NtERF2 ------>HVH21<---------RAP2.3(1)      <---------ANAC58   --------->ANAC58   --------->LBD16 --->DEAR3(2)------>NtERF2 <----------DOF2               --------->ANAC46  --------->LBD16 >ATERF1(1) <---------ANAC46 <----------DOF2           <-----------GT1    <---------LBD16   gacggttctatgttgcgccgacgaggctgctctttgttgggcttgcgatgagaaaattcacgccgctaataaactcgccggaaaacatcagagagtccct  29572400                     --------->ANAC58    --------->At4g35610 <---------DAG2              <---------At4g35610         ------>NtERF2                   <---------At4g35610 <----------DOF2     <---------ARR11(3) <      --------->At4g35610               >>>>>>>GRF7<---------CCA1(2)             --------->ARR11(3)--      <---------At4g35610    ----------->HVH21   <---------ICU4                  --------->GLK1(2) <-   ------>NtERF2     --------->ANAC58<-----------HVH21 <----------DOF2     <-----------GT1------>ZmHOX2a(2)   ctctctgcctctgcctcttccatacccaaatgtgacatttgtcaggtctcatcatctctttgactttttctctcgatttacaaaatctttgatctgattt  29572500         <---------WRKY18(1)        --------->WRKY38(1)        --------->WRKY12                             <------ZmHOX2a(1)    <---------YAB1                            <----------DOF2                                  <----- ---------GLK1(2)                          ------->TEIL                                      <------- ------->At4g35610                        <---------CCA1(2)                              <---------GLK1(2) --------At4g35610                ---------->DOF2  <---------TOE2(3)---------->DOF2    <---------YAB1   cagattacccttgactgaaattctcaatatttagagaaaagtttgaatctttttaggattagagaggccataaaccagtttttttagttctgattctgtt  29572600  Previous    Next  AGI:  At1g78600.1    Description:  zinc finger (B-box type) family protein. Identical to Putative salt tolerance-like protein At1g78600 [Arabidopsis Thaliana] (GB:Q9SYM2;GB:Q8RWG4); similar to STO (SALT TOLERANCE), transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G06040.2); similar to STO (SALT TOLERANCE), transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G06040.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39479.1); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926) Range:  from: 29572080    to: 29573752    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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