Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->ANAC58                  --------->ANAC46                  --------->ANAC58                                            --------->ALFIN1                --------->MYB46(3)                                ---------->DOF2  ---------->DOF2         ------>MYB83                                 <-----------GT1         <---------ANAC46         ------>MYB46(1)                         --------->ANAC55(2)    <-------TEIL       --------->MYB46(3)                        <---------ANAC55(2)   --------->CCA1(2)        -----   catggtttaccaactgtaaccagcaagagagcattttcaaaaacagaagtcacgttttacgagaaacacaaagattcaaggtgtgtaaagagactaactt  29551000                                                         <---------ARR14(2)                                          --------->ANAC58                   --------->ANAC58    --------->ZAT2    --------->ARR14(2)                   --------->ANAC58    <---------At4g35610            <---------ICU4             <---------ZAT2   <------NtERF2        <---------------AGL15  <---------GLK1(2)       --------->LBD16       <-----------------AG   <---------ZAT2          <---------ANAC46    <-----------HVH21   --------->ARR14(2)   --------->GLK1(1) --------->ANAC58             ------->GAMYB --------->ATHB12 ------>GT1<---------ATHB12   <---------At4g35610    <---------LBD16--------->MYB52(1)     <---------GLK1(2)   gaaaaaatccccaatcttggcaagcgaaatccagcttcttgagctcggaatccatggcggaaacagaacacaaccgtgtcatgtcgatgactggaatctc  29551100                        ------>ZmHOX2a(2)                       <---------GLK1(1)                       <------ZmHOX2a(2)                      --------->ARR11(3)                                               --------->ZAT6                      <---------AGP1                          <------ZmHOX2a(1)     <----------DOF2<<                      <---------ARR11(3)                 --------->TOE1(1)  <---------ARR11(3)  <----              <--------HAHB4       <---------ANAC58     <---------LBD16     --------->ARR11(3)  <----              --------->ATHB12     <---------ANAC58--------->KAN4(2)        <-----------ARR10--------           --------->YAB1        <-----------GT1  --------->HSFB2a(1)       --------->ARR14(2)  -----     --------->ZAT6   <-----------ARR10    -------->P  --------->TOE1(2)    <---------ARR14(2)  -----   agaactaagactagaatcatttaagatctcagttttttcttgatcaacccgaacatacctcggaggaatagttgtgaagttcttctctttcactatctct  29551200     --------->DAG2                          ------>NtERF2                                          -   ---------->DOF2                <-----------GT1                                                   - <<<<<ZML2              <---------ALFIN1    --------->DEAR3(1)                                      - -----HSFB2a(2)        <---------ZAT14    <---------ATERF1(1)                                     <-- -----HSFC1(1)         --------->ZAT18    ------>NtERF2                 <---------------AtSPL8   ---- ->ZAT6      <---------YAB1     <-----------GT1--------->ATHB12        ---------->DOF2           ---- ---->HSFC1(1)         --------->ZAT14    --------->LBD16     ----------->RAV1(1)   <---------ANAC55(2) ---->HSFB2a(2)     --------->GLK1(1) ------>ZmHOX2a(1) <---------REM1(1) <----------ID1   <---------   agaacaaaaggtactatgagagaactccactgtttttctccttccgcctccattggacttgtagcaccagaacaaaagtacaaatctcgtaagctttgat  29551300        --------->MYB46(3)       --------->ANAC58       --------->ANAC58     <---------MYB55(2)     <---------MYB111(1)     <---------MYB111(2)     --------->MYB46(3)   ------>MYB46(1)   ------>MYB83 <---------MYB55(2) --------->MYB46(3) -------->ANAC46 -------->ANAC58 -------->ANAC58  --------->LBD16 -------ALFIN1   --------->HSFB2a(2)                           ----------->GT1 -->ZmHOX2a(2)   <---------HSFB2a(2)                          --------->DAG2 ----->MYB46(3) <---------LBD16       --------->DAG2        ---------->DOF2     *TSS -DOF2------->GAMYB         --------->MYB52(1)    <---------GLK1(1)---------->DOF2   ccacccaacaaccaattttccggaagaaaaaaacgaacaaaaattgaaattgaaatcagagagaaaggtgaaagaaaatcgatttggagaagacgactta  29551400                                                                                          <----------DOF2                                                                                         <---------DAG2                ----------->HVH21                                                     <-----------GT1            ------>ZmHOX2a(1)          <---------WOX13(1)                       <---------ANAC55(2)            ----------->RAV1(2)       <------------CBF     --------->ANAC46     --------->ANAC55(2)        <-----------GT1             ------>ZmHOX2a(1)   -------->P            <-----------GT1  <-----    <----------DOF2                <---------MYB59  <-----------ARR10         --------->AHL20(2)  ---   aaacgtcttttatcctctgcgaccaagactagctgttcctaattgaaaaccccaaaactaccctccacaaatgttagaaattacatattagccttttcaa  29551500     --------->ANAC55(2)     <---------ANAC55(2)                                  <----------DOF2    <---------GLK1(1) ------GT1                                      <-----------GT1              --------->GLK1(1)  <xxxx ------>TOE2(3)             <---------YAB1   --------->ARR14(2)  --------->YAB1          ----------->GT1   cctcatcacttgattcacgatgaacaaaatatgattttcatgtttcgaattcacaaaattctttgaagaataacaagagaaatctcagacatagaaaaaa  29551600                 <----------DOF2            ---------->DOF2     --------->ARR11(3)            <---------MYB52(1)     --------->GLK1(2)         <-----------------AGL1     <---------ARR11(3)        <-----------------AG    --------->RVE1(1)  --------->ANAC58                   --------->TOE2(3)     <---------ARR11(3)    --------->CCA1(1)  --------->ANAC46                ------->GAMYB            --------->ARR11(3)  --------->AHL20(2)   --------->ANAC58   <-------TEIL<---------MYB52(2)    ---------->DOF2 xxxxxxxxxxxxsmallRNA(i)       <-----------------AGL2 --------->MYB46(3)  ------>ZmHOX2a(1)   aaaaaaaaatcttccaaagctttacaagacataacccgttttggttcatttgttcaacaaacttaactaaatggtcctgaaagatgttgaaattgagtaa  29551700                                <----------DOF2                                                     <                           <---------ANAC58                    <---------ANAC58                     <                           <---------ANAC58                    <---------ANAC58      --------->ANAC46                  <----------DOF2                        <---------ZAT18             --------->ANAC58                ------->TEIL<----------DOF2              --------->ZAT18     --------->ANAC46  <-----      <------ZmHOX2a(1)<----------DOF2            ----------------------->TaNAC69(2) --------->ANAC58   cacagtgaggacttcatgaactttcctttgctttctttttagtcttcaagctgttttggggcactgcgtctccaaattccagccaagacgctaccgagga  29551800                                --------->ZAT18                                <---------ZAT14                             --------->SPL7                        --------->SPL7                      --------->ZAT14                      --------->ZAT18         --------->ANAC58--------->ANAC46                                             <---------ARR11(3)         --------->ANAC46--------->ANAC58                  <-----------HVH21  <---------MYB55(2)         --------->ANAC58--------->ANAC58   <---------GLK1(1)                 --------->MYB46(3)  ----------->HVH21   <---------ZAT14       --------->GLK1(1)                --------->ANAC58 <---------WOX13(1)   <---------SPL7       <---------ARR14(2)    --------->ANAC58     --------->ARR11(3) ---------ANAC58      <---------ZAT18--------->ATHB12     --------->ALFIN1   --------->ANAC46 ---------ANAC58    --------->At4g35610    --------->ARR14(2)    --------->ANAC58 --------->DEAR3(1) -ZmHOX2a(1)     ---------->DOF2--------->ZAT14    ---------->DOF2           --------->ANAC58   ttgagtgacagacgctagaaacagcgcacggtactgcagtgagtggattcccaaaatgctgtgtcgcaagaacaactccaagcaccgagttcttcaccaa  29551900  Previous    Next  AGI:  At1g78550.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to SRG1 (SENESCENCE-RELATED GENE 1), oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Arabidopsis thaliana] (TAIR:AT1G17020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70478.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283) Range:  from: 29549820    to: 29551380    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g78560.1    Description:  bile acid:sodium symporter family protein. similar to bile acid:sodium symporter family protein [Arabidopsis thaliana] (TAIR:AT2G26900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39489.1); contains InterPro domain Bile acid:sodium symporter; (InterPro:IPR002657) Range:  from: 29551498    to: 29553717    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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