Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            ---------->DOF2                    ---------->DOF2                   <---------AHL20(2)                   --------->AHL20(2)                             --------->LBD16                  <---------YAB1                                <---------LBD16      <---------ARR14(2)                <--------HAHB4                        --------->YAB1 <---------GLK1(1)                <---------ICU4                       <---------YAB1  --------->GLK1(1)               --------->ICU4                        <---------TOE2(3)--------->ARR11(3)               <---------YAB1                        <---------TOE1(3)<---------ARR11(3)   <---------ATHB12             --------->YAB1              <---------LBD16   --------->ICU4            --------->ARR14(2)   aagtgtttttcgatagcataattaaagagaaagagcaaactcactcggattagttatggtaatgagtccggagttcttgaaattgcagttccaatagttt  29543100                ---------->DOF2                --------->YAB1               --------->ICU4                                                                   <----          <------MYB83                                                                    --------->ANAC46          ----------->GT1                        ----------->GT1                          --------->ANAC58          <------MYB46(1)                  <---------MYB46(3)                             --------->ANAC58       <---------ANAC58                   <--------P                              ---------->DOF2----       <---------ANAC46                 --------->ATHB12                      --------->ANAC58 ------       <---------ANAC58              <---------AtLEC2        ----------->GT1  --------->ANAC46 ------   <---------MYB52(1) <-------TEIL  <-------TEIL<---------TOE2(3)             --------->ANAC58-------   cttccattggcttggtaataaagattcatggcgatagatgcatggttgatgaggttactaggggagtaacatggacatccactcaaaagaacacgacaat  29543200         --------->TOE1(2)                                       --------->ANAC46         --------->TOE2(2)                                       --------->ANAC58 -----ATHB12                                                     --------->ANAC58 ----->YAB1                                                    --------->ANAC58 --->ANAC58                                                    --------->ANAC58 --->ANAC58              --------->ARR11(3)               <-----------GT1               --------->MYB46(3) -->WOX13(1)        <---------TOE2(3)        ------>ZmHOX2a(2) <---------ALFIN1    --------->YAB1   caacatgagaacatgcgaagtttatgttatcttgaagtgctacttgatcggaagaaggtttagccacacaccaagtcttggtctataacaacaacttaga  29543300                                                                         <---------ANAC46                                                                        <---------TOE2(3)                                                                        <---------TOE1(3)                                                                       <---------DOF5.7(2)       ----                                                                      ----------->HVH21     ---------                                                     --------->ANAC58 --------->WRKY12      <--------                                                     --------->ANAC58 --------->WRKY38(1)   ---------                                               <------MYB83           ----------->TGA1 <---------ANAC58                                               <------MYB46(1)      <-------GAMYB      <---------ANAC58               ----------->GT1         <---------YAB1--------->ANAC46--------->DOF5.7(2) <---------MYB52(1)      --------->ATHB12--------->AHL20(2)   <---------MYB46(3)      <---------ANAC46<---------HSFC1(2)   acaaaaactcattgagtaagaaaaaaaaatcagatagcaatttgatagttggtctaagcaaatacctctgcgttgacgttgatgaagtttcgttctgtta  29543400                                               <---------AHL20(2)                                           --------->AHL20(1)                                           <---------AHL20(2)                                          <---------AHL20(2)                                       <---------AHL20(1)                                       --------->AHL20(1)                                       --------->AHL20(2)                                       <---------AHL20(2)                                      --------->AHL20(2)                                           --                                  <---------YAB1                                           --------->TOE2(2)                             --------->YAB1--------->AHL20(2)                              --------->TOE1(2)  ---------->DOF2       <---------MYB52(1)--------->AHL20(2)                              ----------- ------>DOF2          ----------->GT1 <---------AHL20(2)      --------->ATHB12      <---------AHL20(2) ------>AGL15         <---------ZAT6 <---------YAB1    <------ZmHOX2a(1)            --------->AHL20(2) -------AGL15   <---------YAB1  <------ZmHOX2a(1)  --------->TOE1(2)         ----------->GT1       -- -->GT1       <------ZmHOX2a(1)<---------YAB1  --------->AHL20(2)   <---------ZAT6 <---------AHL20(2)   aaaggaaagaacatgaggatgatactgttaattaggattattaaattaattaaactaggatggctgattagtggtaaactggtaatttatatacctgaga  29543500                               <-------TEIL                              <------ZmHOX2a(2)                             --------->ARR11(3)                             --------->AGP1                             <---------ARR14(2)                            <---------At4g35610                            --------->GLK1(1)                       --------->DAG2                     ---------->DOF2     >>>>>>>>>>>>>>>>>LFY          <---------At4g35610<---------ARR11(3)                                            <---------ANAC46       <------ZmHOX2a(1)    --------->At4g35610                                          <---------ANAC46       ==============================HOX2a_HOX2a                                      <----------DOF2 ------->ANAC58 <------ZmHOX2a(1)    <----------DOF2                             <---------ALFIN1 >RAV1(2) --------->At4g35610--------->ARR14(2)                <---------ANAC58 <---------ZAT14  ---- ------->ANAC58 =====================HOX2a_HOX2a               <---------ANAC58 --------->ZAT14  <---   caaggtagaggaagatgaggaaggaaaggcagatccatgctttagccattgtttgatttttgtttgagtgagagaactcttctacactctttggtgtata  29543600                                                                               --------->ARR11(3)                                                                               <---------ARR11(3)                                                                              --------->GLK1(1)                                                                              <---------GLK1(1)                                                                             --------->ARR11(3)                                                                    <---------------AGL15                                           ---------->DOF2          =================================                                        <---------AHL20(2)          --------------->AGL15          ----------->GT1      --------->AHL20(2)      --------->ARR11(3)    <---------ARR11(3)  --------->YAB1          --------->AHL20(2)   <----------ID1       <----------DOF2           <------ --------->ICU4       <---------AHL20(2)--------->AHL20(2)          <---------DAG2          <-------- ----->AHL20(2)      --------->AHL20(2)--------->AHL20(2)        <-----------GT1      --------->YAB1 ------AHL20(2) ------------>CBF  ------------>CBF     <---------ARR11(3)   <<<<<<<<<RAP2.2 ---------   taaatgatgagcaagtgaatcaattttataaaataaaacaatttaaaaagaaacaaagatttgtatttcactttttttagatatctaatgctaattaatg  29543700                                                <---------At5g28300                                               <-----------GT1                               <------MYB83                                           --------->DAG2                                    <------MYB46(1)                                          ---------->DOF2                           --------->ATHB12                                        <------ZmHOX2a(1)                     --------->ANAC55(1)                                     --------->HSFC1(1)                       --------->ANAC55(2)                                     ================================================================                                     <---------HSFB2a(2)                      --------->ANAC58                                     --------->HSFB2a(2)                      --------->YAB1---------                                     --------------->AGL15                    --------->ANAC58     --------->ARR11(3)           <----------DOF2                         <---------AHL20(2)<--------    <------ZmHOX2a(1)            <---------ANAC58                    <---------MYB52(1) <------MYB83  <---------TOE2(3)              <---------ANAC58            --------->DAG2   --------->ANAC46 ====================================================MADS_MADS     ----------->GT1 <---------YAB1 ---TOE2(3)       <---------KAN4(1)  <---------HSFC1(1)     ---------->DOF2  <---------TOE2(3) -AHL20(2)  ----------->GT1      <---------ANAC46<------------MYB.PH3(1)----------->TBP <------MYB46(1) >AHL20(2) <---------TOE2(3) <------------CBF  --------->MYB52(1)  <---------ANAC46--------->ICU4   tttttaggattttgaggtgaataatccagcaaattgcttctaggaaaagtaaccgttttagcaaaagtgtcgttatataaacgtaatgtttggtttggtt  29543800                                       ----------->GT1                                              -                                <---------------AGL15                                               -                            <---------WOX13(1)                                                      <                  --------->DAG2--------------->AGL15                                               <   --------->ANAC58        <------------CBF  <---------TOE2(3)                 --------->ANAC58------   --------->ANAC58  <--------P<---------ANAC58                                --------->ANAC58------ ===============================================MADS_MADS                      --------->ANAC46<----- >MYB59           <---------TOE2(3)   --------->DAG2                       <-----------GT1     <----- -AtMYB61       ---------->DOF2<---------ANAC58       <---------ZAT6 <------ZmHOX2a(2)    <---------ANAC55(2)   ttgctaagtaacaaaaaaaaaaggttgctaattgcttcaaaaggtttaatgtagtagtgagaacatttgggatcaaataacaagacatcaaaacgtgagc  29543900                          <------ZmHOX2a(2)        --------->YAB1                         <---------ARR14(2)        --------->TOE1(3)   --------->At5g28300   <---------ARR11(3)        --------->TOE2(3)  ----------->GT1        --------->ARR14(2)      --------->GLK1(2)                                --- -------->At4g35610      --------->AGP1          --------->ARR14(2)                               <-- -------->ZAT2           --------->ARR11(3)      <---------ARR14(2)                              ---- ---------At4g35610  ---------->DOF2             <---------ARR11(3)                         --------- ---------ZAT2      --------->AHL20(2)          <---------GLK1(2)                         --------->YAB1 --->ZAT2   ----------->GT1                 <---------TOE2(1)                        <---------ANAC58 --->At4g35610      <---------AHL20(2)<----------DOF2    ---------->DOF2             <---------ANAC58 ----At4g35610  --------->ICU4     <---------ALFIN1----------->GT1                   <---------ANAC46 ----ZAT2   <----------ID1--------->CCA1(2) <---------TOE1(1)                 <----------DOF2--------   tgagctgtaaattagggaaaaattaaagatccaatgcccactttgtacgagaatcttaaaaaagaatagttgatataaggcttttttgtgtgtaataatc  29544000  Previous    Next  AGI:  At1g78520.1    Description:  glycosyl hydrolase family protein 17. similar to glycosyl hydrolase family protein 17 [Arabidopsis thaliana] (TAIR:AT2G43670.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67524.1); contains InterPro domain X8 (InterPro:IPR012946) Range:  from: 29543022    to: 29543549    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g78530.1    Description:  protein kinase family protein. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G31420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39504.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 29543982    to: 29545602    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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