Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                              <------                                                                                      <----------DOF2                                                                                  ------>ZmHOX2a(2)                                                                                 --------->GLK1(1)                                                                                 <------ZmHOX2a(2)                                                                                 <---------GLK1(1)                                                                                --------->ARR14(3)                      <---------ANAC55(2)                                       --------->ARR11(3)             --------->ARR11(3)                                                 <---------ARR11(3)             <-----------ARR10                                                  <---------ARR14(2)             <---------ARR11(3)                                                 --------->ARR14(2)            --------->CCA1(1)               <----------DOF2                    --------->GLK1(1)            --------->RVE1(1)    --------->DAG2          --------->YAB1        <---------GLK1(1)<----        --------->AHL20(2)      ---------->DOF2        --------->GLK1(2)  ---------->DOF2     <------   aaaaactaaatcaaatatctaatcacataaaacaaaaagtttaagactttaagtgagaatcatacataccattgagcaaagagatctcctttgatttcgt  29541900                                                                                                    -                                                                                                 ----                                                                                            <--------                                                                                          --------->ATERF1(1)                          --------->RAP2.6(2)                                             --------->RAP2.6(3)                          --------->ANAC58                                              <---------TGA1a                   ------>NtERF2                                                        --------->ETT(2)                   ----------->RAV1(1)                                                  =============      <----------DOF2     --------->ANAC58                                              <---------ETT(2)   --------->DEAR3(1)--------->AtMYB61                                                --------->MYB52(1)  <------NtERF2   <---------ALFIN1                                                   ----------->TGA1  --------->DEAR4(2) --------->MYB46(3)                                              ----------->HVH21 ------>NtERF2    --------->ANAC46                                                  <---------MYB52(2) --GAMYB         --------->MYB46(3)                                                --------->At4g35610 ---ANAC58   <---------ALFIN1                                                      <---------At4g35610 -----MYB52(1)------->GAMYB                                                   <---------TOE2(3)------ ---ANAC58  <---------At4g35610                                            <---------ATHB12 ------>NtERF2   tggcaccgctttgcaactccccaccagaccgccatagcttctattgctgctagtaaacttacaaacagtcttcgctaatgaaggaaactgacgacggcca  29542000                                                  <---------ICU4                                                 <---------YAB1                                                 --------->ICU4                                              --------->TGA2(2)                                             <-----------TGA1                                            <---------ANAC55(2)                                            --------->O2             <---------YAB1                 --------->ANAC55(2)           <---------ICU4                   <---------O2          --------->ICU4                    --------->TGA2(1)     --------->ANAC58                       --------->bZIP60(1)     --------->ANAC46                       <---------bZIP60(1)     --------->ANAC58                       <---------TGA2(1)    ------->MYC2                            <<<<<<<<<<HY5    <-------MYC3                            >>>>>>>>>>HY5    ------->MYC3      --------->TOE2(3)    --------->RAP2.6(3)    <-------MYC2      <---------MYB59      ----------->STF1 ------->GAMYB      ------->TEIL           <-----------STF1              ------>ZmHOX2a(1) <---------ALFIN1--------->TOE1(1)        <---------TGA2(2)              <----------DOF2 -------->MYB46(3)<---------SPL7         ----------->TGA1            --------->GLK1(2) ----->MYB46(3)  --------->TOE2(1)       ----------->HVH21           --------->ARR14(2) -ATERF1(1)--------->YAB1              <---------O2                  <---------ARR14(2)         ----- ========MYC_MYB--------------->AtSPL8 --------->O2                 <---------GLK1(2)        <------- --->RAP2.6(2)<---------ICU4        <---------ETT(1)      --------->ANAC46                --------->ICU4   caaccacatgccatcatcatcgtacctaaatctatattccgacatgacgtcatcattctcacaaaacccagaatccttttgggcaactagggattatgaa  29542100                                                       --------->At4g35610          <---------ANAC58                                                     --------->DAG2                 <---------ANAC58                                     <----------DOF2---------->DOF2         --------->At5g28300                               <-------TEIL     --------->ANAC58           --------->LBD16      <----      ---------->DOF2      --------->ICU4     --------->MYB52(1)         <---------LBD16       ------ -->TEIL                 ---------->DOF2---------->DOF2<---------At4g35610--------->ANAC46 ---------- --YAB1    --------->MYB52(1) --------->CCA1(2) --------->ANAC58<----------DOF2     <---------ANAC46   gctctatagaaagtaactggaactatgtaaagattcaagctttaaagcaaacgaaaaagctgactccttttcttccacgggaaattgggtgtatggaaaa  29542200                                                                                    --------->ALFIN1                                                                                  <------MYB83                                                                                  <---------ANAC46                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                                                                 --------->MYB55(2)                                                                                 <---------MYB46(3)                                                                              =======================             <----------ID1                 --------->ANAC55(2)               <-------GAMYB            ----------->GT1                 <---------ANAC55(2)    <-----------GT1<------MYB46(1)           --------------->AtSPL8   <------MYB46(1)     <------ZmHOX2a(2)    --------->MYB55(2) <----------ID1<-------TEIL         ----------->GT1    --------->ARR14(2)    --------->MYB52(2)------ -----ICU4 --------->DAG2           <------MYB83   --------->At4g35610       <---------MYB46(3)------ --->ICU4  <---------------AtSPL8  <---------MYB46(3)  <---------ARR14(2)    --------->MYB111(2)   -- ->GT1   ---------->DOF2          --------->ALFIN1 <---------At4g35610       <-----------RAV1(1)   <-   attacaacaaaaaaaggtacaaaaatacaaaatcaagtgggtgattaagtatcagccgatcgagttttttttctatagtttgttgggtggacgagacaag  29542300          --------->KAN4(2)          *TSS        <------ZmHOX2a(2)       --------->ARR11(3)       <---------ARR11(3) <---------O2 --------->O2 --------->HSFB2a(2) ==================================bZIP_DOF --------->TGA1a        ---------->DOF2 <---------TGA1a      --------->ANAC46 ==========MYC_MYB    --------->ANAC58 --->ANAC58   <---------HSFB2a(2)                                          --------->ATHB12 --->ANAC58  <---------LBD16----------->HVH21                            <---------WOX13(1) --------->RAV1(1)    --------->ANAC58               --------->TOE1(2)  <------------CBF  <---------- --------ALFIN1    <------NtERF2              ------------>CBF         --------->ATHB12  <---------CCA1(2)   cccacatgagatcattcgggaggcacgaaagtgacgactgtgtttttgttcaataccaaggagaagagggaaacgattgattagtctacgcttatctaat  29542400                     <-----------HVH21                   ------->MYC3                   <-------MYC3                   <-------MYC4                   ------->MYC4                   ------->MYC2                   ------->PIF5                   <-------MYC2                   <-------PIF5                  <---------O2                  --------->O2                  <---------TGA1a                  --------->ANAC55(2)                                       --------->TOE2(3)                  <---------ANAC55(2)                                   --------->DOF5.7(2)                  --------->TGA1a                                       <---------MYB52(1)                <---------ALFIN1                                      <---------ANAC55(2)    <-------             <-----------GT1                                          --------->ANAC55(2)    --------          <---------GLK1(1)              >>>>>>>>>MYB98               --------->ANAC55(1)    --------         --------->ARR11(3)             <-----------GT1               --------->ANAC46      ---------         <---------ARR11(3)        ----------->GT1         <---------ARR14(2)<----------DOF2--------- -ARR10<---------TOE2(3)          <---------ATHB12 --------->TOE1(2) <-------TEIL         --------->AHL20(2)   cttgaggctaagatttcaccacgtgtcatttatccaatggtttaacatactaacattcgagtatatcgaaatacgttacctttataaaaaaaaaaaatct  29542500        <---------MYB52(1)      <---------ANAC58      <---------ANAC58  <---------GLK1(1)                             <---------ANAC58 --ARR11(3)            ---------->DOF2          <---------ANAC58 ->GLK1(2)           --------->ANAC58           <---------ANAC46               <---------ANAC46 ->ARR11(3)          --------->ANAC58           --------->ANAC55(2)            ----------->GT1 >CCA1(1)       ----------->HVH21  ---------->DOF2                            --------->ALFIN1    --- >RVE1(1) --------->MYB52(2)  ---------->DOF2<---------MYB52(1)          <-------TEIL         -------   ttagaaatgcgttagtttctgacaccaaagaaaaaagaaaagaaaacgttacgttgttctacatatttccaaatgttcatgtggtgaagaattcaatttt  29542600                                          --------->ICU4                                     --------->ANAC55(1)                                     --------->ANAC58                        <---------YAB1                                     --------->ANAC55(2)                   --------->YAB1            --------->At5g28300      --------->ANAC58                   --------->YAB1          <---------TOE2(3)          --------->ANAC46                   <---------ICU4         <---------At5g28300         ----------->GT1                    --------->ATHB51       ------  --------->TOE1(3)                  <---------ANAC55(2)                <--------ATHB1         <-----  --------->TOE2(3)             <---------------AtSPL3                 <---------ATHB51      -------- ------->DOF2<--------P       <-----------HVH21    <---------YAB1      --------->ICU4    --------->YAB1 -->YAB1<-----------GT1    <---------At5g28300     --------->ICU4  ----------->GT1      <---------YAB1   aaaagcttaattacggtaagttctatgtttacggtcagtacgtaataagggtcattactgaaaatgagatggaataattgtgatcaaattttgataagtg  29542700                                                    <---------ZAT18                                                --------->TOE1(2)                                              --------->GLK1(2)                                              --------->ARR11(3)                                              <---------ARR11(3)                                              --------->ARR14(2)                                 ----         <----------DOF2                      <---------ARR14(2)                                 ----     <----------DOF2 <---------TOE2(3)    --------->YAB1                 <---------YAB1     --------- --->ALFIN1      <----------DOF2       --------->WOX13(1)         --------->AHL20(2)        --------- ------RAV1(1)  <---------ANAC58     <---------WOX13(1) <----------DOF2--------->YAB1     ----------- ->ANAC55(2)    <---------ANAC58  <---------YAB1--------->TOE2(2) <---------AHL20(2)<---------ICU4   ttggatactttcttttttgcttttatgttatcaaatttgattaatcaaaatctgcgaactttggaaatttaaattataactcataaacattgcaacaaca  29542800  Previous    Next  AGI:  At1g78510.1    Description:  SPS1 (SOLANESYL DIPHOSPHATE SYNTHASE 1); dimethylallyltranstransferase/ trans-octaprenyltranstransferase. similar to SPS2 (SOLANESYL DIPHOSPHATE SYNTHASE 2), dimethylallyltranstransferase/ trans-octaprenyltranstransferase [Arabidopsis thaliana] (TAIR:AT1G17050.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39509.1); contains InterPro domain Polyprenyl synthetase; (InterPro:IPR000092); contains InterPro domain Terpenoid synthase (InterPro:IPR008949); contains InterPro domain Solanesyl diphosphate synthase (InterPro:IPR014120) Range:  from: 29540178    to: 29542310    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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