Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->AHL20(2)               <---------AHL20(2)              <---------YAB1            --------->YAB1           <---------YAB1        --------->AHL20(2)        --------->AHL20(1)                                ----------->GT1        <---------AHL20(2)                      --------->YAB1    <---------AHL20(2)                        <---------TOE2(3)    --------->AHL20(2)                      <---------AHL20(2)   --------->AHL20(2)                      --------->AHL20(2)                        --------->TOE2(3) ------->GLK1(2)                           <---------AHL20(2)               <---------ICU4         <- ->DOF2 <---------AHL20(1)  ----------->GT1--------->AHL20(1)            --------->YAB1  <---------TOE2(3)   gaatatttaatttattataaattttgttagatgttaattttaaaatttaatgaaaataagtagaaaaatagacaaaaattatgtctagcttaatgttatg  29536100                                                  <---------AHL20(2)                                                <---------RVE1(1)                                                <---------CCA1(1)          <---------ICU4                                               <---------GLK1(2)           --------->YAB1                                               <---------ARR11(3)         --------->ICU4                                               --------->ARR11(3)       --------->TOE2(3)                                             <---------TOE1(3)          --------->YAB1                                             <---------TOE2(3)    <---------YAB1                                   <---------RVE1(1)            <---------ICU4           <---------YAB1          <---------CCA1(1)            --------->YAB1        <---------YAB1            --------->ARR11(3)           <---------ATHB12 ---------DOF2    ---------->DOF2 <---------ARR11(3)        <---------AHL20(2)           ---------->DOF2   cctttccgatatgatgaaaacaaagtatgtcccatagatatttgtttaagatttttttttttttaatcataataccataatgaaatctaatgaaagtttg  29536200                                                                 <---------AHL20(2)                                                                --------->AHL20(2)                                                        --------->AHL20(2)            <-----------HVH21                           <---------AHL20(2)           --------->ANAC46                             <---------AHL20(1)           --------->bZIP60(2)                     <---------AHL20(2)        <---------TOE1(3)          ------->MYC3                             <---------AHL20(1)      <---------AHL20(2)          ------->MYC2                             --------->AHL20(2)     --------->AHL20(2)          <-------MYC4                             --------->AHL20(1)   --------->ARR11(3)          <-------MYC2                            --------->AHL20(2)    <---------ARR11(3)          <-------MYC3                      <---------WOX13(1) <---------YAB1<---------TOE2(3)        <-------TEIL    --------->DAG2     <------------CBF  <---------AHL20(2)    --------->DAG2    ---------->DOF2    <---------AHL20(2) --------->AHL20(2)                 ------  ---------->DOF2---------->DOF2         --------->AHL20(2) <---------AHL20(2)         <----------DOF2   agagaaaaggcacatgtcacaaagaaaaggcacttctattagtttaattgaattttattttatttattatataagatttaatgttatctctttcaaaaaa  29536300                                                        --------->YAB1                                                       <---------AHL20(2)                                                      --------->AHL20(2)                                                    <---------AHL20(1)                                                    --------->AHL20(1)                                               <---------AHL20(2)                                               --------->AHL20(2)<---------AHL20(2)                                            <---------AHL20(2)  <---------AHL20(2)        --------->ANAC58                    --------->AHL20(2)  --------->AHL20(1)        --------->ANAC58                <---------RVE1(1)       --------->AHL20(2)  --------->ATHB12                      <---------CCA1(1)   <---------AHL20(2)       --------->ANAC58  --------->YAB1                       <---------ARR11(3)  <---------AHL20(2)        --------->ANAC58 <---------YAB1    ------->TEIL        --------->ARR11(3)  --------->AHL20(2)      ---------->DOF2 ---->DOF2        <---------CCA1(2)    <---------AHL20(1)  <---------AHL20(1)     <------ZmHOX2a(1)   agaatgatagaagcaaaaatgtatctccttgatagtttcaagatatttttttaatatataataaaatttaatagaagtttgagaggaaagacacatatta  29536400                                      <---------ANAC58                                      <---------ANAC58                       --------->ANAC55(2)                                  <---------ANAC58                           <---------ANAC58                                  <---------ANAC58                           <---------ANAC58     <--                                 --------->ZAT2  --------->TOE1(3)   --------->ATHB51            <---                                 <---------ZAT2  --------->TOE2(3)   --------->AHL20(2)<---------ATHB12                    <----------DOF2   <---------ANAC46              --------->ICU4 ------------>CBF--           <------MYB46(1)       --------->At4g35610        <---------YAB1 <-----------GT1      -----           <------MYB83          <---------At4g35610  ------------>CBF   <---------AHL20(2) <--------   gaagagggatgctaggtgtcatctttctcagtgtgagcttgcgttcagaaaccttacacaatatgatggcattatttatacgtgctccaatgttttacat  29536500                                                                  <------NtERF2                                                           ---------->CDC5                         --                                                    ------>ZmHOX2a(2)                              <-                                                   <------ZmHOX2a(2)                          -------                                                  <---------ARR11(3)                         ------>MYB83                                                  <---------ARR14(2)                         ------>MYB46(1) -------AtLEC2                                    --------->ARR14(2)<---------At4g35610     --------- ----TEIL          ---------->DOF2                --------->ARR11(3)--------->At4g35610    --------->AtMYB61 ----->TEIL      <---------HSFB2a(2)       --------->At4g35610  <---------ANAC46          --------->MYB46(3) ---->AtLEC2     --------->HSFB2a(2)     <---------RAP2.6(2)    <---------DEAR3(1)     --------->MYB46(3) ---GT1      <----------DOF2          --------->ALFIN1     --------->MYB52(1)        <-----------GT1<   gcatgttcttgttgactttctaaaaggtttgatacaaaatgtggaggctgaagatcggggctaagggcggagatgagactcacttattcaccaccaacaa  29536600      ==================bZIP_DOF      --------->SPL7      ---------->DOF2     <---------MYB52(1)    --------->LBD16  <---------LBD16                                 <---------ARR14(2) ------->ZAT14                               --------->LBD16                                        < --------ZAT14                              <---------HSFB2a(2)      ------->TEIL                   - -->MYB46(3)                       <---------ANAC58        <---------AtMYB61                     <--- -->RAV1(1)   <---------TGA1a      <---------ANAC58     <----------CDC5        <---------GLK1(2)<---- ---------ALFIN1                  <-------TEIL   <------ZmHOX2a(1) ---------->DOF2        ---------->DOF2   ctacaccggaaggcagacttgggagtttgatgccgatgcatgctctccagaggaactcgctgaggtcgatgaagctcgtcagaatttctccataaaccga  29536700                         <----------DOF2                     ------>ZmHOX2a(2)                    --------->GLK1(1)                    <---------GLK1(1)                   --------->ARR11(3)                   --------->ARR14(2)               <XXXXXXXXXXXXXXXXXXXXMIR399B/C                  --------->YAB1--------->HSFB2a(1)               <XXXXXXXXXXXXXXXXXXXXMIR399A                 --------->YAB1   <---------HSFC1(2)               <XXXXXXXXXXXXXXXXXXXXMIR399F                <-------TEIL      <---------HSFB2a(1)          <------ZmHOX2a(2)                               --------->AtLEC2 ---------->DOF2         --------->ARR11(3)                           <-----------GT1<---------ICU4         ------>ZmHOX2a(2)         <---------ARR11(3)                          <-----------GT1--------->ICU4--------->HSFB2a(2) ---------ANAC55(2)<---------ARR11(3)               <---------AHL20(2)  --------->YAB1    <---------ARR11(3) -------->ANAC55(2)<---------ARR14(2)          <---------AHL20(2) --------->YAB1  <---------HSFB2a(2) ---ZmHOX2a(2) <XXXXXXXXXXXXXXXXXXXXMIR399D  <----------DOF2<---------AtLEC2 --------->HSFC1(2) -------HVH21  <---------At4g35610      <--------P --------->YAB1<---------YAB1  <---------LBD16   tcacgtttcaagatcagtgctgatctcctttggcgaatgcaggtaagctttaattttaacatgcatgatgataatgagaaagttcgggacttgatctctt  29536800                             --------->At5g28300                            ----------->GT1                          <---------At4g35610                          --------->At4g35610                         ----------->RAV1(1)                    <-------GAMYB                   --------->MYB46(2)                   --------->MYB111(2)                   --------->MYB52(2)                   --------->MYB111(1)                 <---------MYB52(1)                                                     ------>ZmHOX2a(1)                ------------>MYB.PH3(2)                              <---------AtLEC2 ----------->RAV1(2)               --------->MYB46(2)            <-------GAMYB   <---------ANAC58 <---------YAB1               --------->MYB111(1)          <------MYB83     <---------ANAC46<---------AHL20(2)               --------->MYB52(2)           <------MYB46(1)  <---------ANAC58--------->AHL20(2)   gggagacactaccatgttagttagttgcagcagtaaaacttgcatttggttgaatataagtttgtgtgtttggatggattttaatagttcctgagggaga  29536900                                                                       <------NtERF2                                                                       --------->ZAT18                   --------->LBD16                                   --------->ANAC58               --------->GLK1(2)        ----------->GT1              --------->ANAC58              <---------GLK1(2)        <---------ANAC46              --------->ANAC46              --------->ARR14(2)      <---------LBD16           ---------->DOF2              <---------ARR14(2)      <-------TEIL           --------->ANAC58             <---------HSFB2a(1)   <---------GLK1(1)         --------->ANAC46             <---------HSFC1(2)    --------->At4g35610       --------->ANAC58                      --             --------->HSFC1(2)    --------->GLK1(1)  <-------TEIL  --------->RAP2.6(3)            --             --------->HSFB2a(1) <------ZmHOX2a(1)--------------->AtSPL3                           --     <---------HSFB2a(2)      --------->CCA1(2)   <---------------AtSPL8              --------->ARR14(2)     --------->HSFB2a(2)--------->ALFIN1--------->LBD16 ---------->DOF2<---------ZAT14<---------ARR14(2)   agaagttcgagcagaagattccgagagtggagataggagatgcggaaaatataacgtacaaagacgcaaagacggcactgagaagagggatactctattt  29537000  Previous    Next  AGI:  At1g78500.1    Description:  pentacyclic triterpene synthase, putative. similar to pentacyclic triterpene synthase, putative [Arabidopsis thaliana] (TAIR:AT5G48010.2); similar to BARS1 (BARUOL SYNTHASE 1), catalytic [Arabidopsis thaliana] (TAIR:AT4G15370.1); similar to ATPEN1 (Arabidopsis thaliana pentacyclic triterpene synthase 1), catalytic/ lyase [Arabidopsis thaliana] (TAIR:AT4G15340.1); similar to beta amyrin synthase [Bruguiera gymnorhiza] (GB:BAF80443.1); similar to beta-amyrin synthase [Betula platyphylla] (GB:BAB83088.1); similar to beta-Amyrin Synthase [Panax ginseng] (GB:BAA33722.1); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-al Range:  from: 29536539    to: 29540070    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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