Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <---------------AGL15              --------->ATHB12              --------->ATHB51              -------->ATHB1                                                                   ------              <---------ICU4                                                                   <-----             <---------YAB1                                                           --------->YAB1             --------->ICU4                                                        <---------AHL20(2)             <---------AHL20(2)                                                   <---------AHL20(2)-             --------->AHL20(1)       ------>MYB83                       <---------AHL20(2)  --------             --------->AHL20(2)       ------>MYB46(1)                   <---------AHL20(2)  ---------           <---------ICU4           <---------MYB59                     --------->AHL20(2)  ---------        <---------AHL20(2)          --------->TOE1(2)        --------->ANAC58     --------->AHL20(2)-       --------->AHL20(2)           <---------MYB111(1)      --------->ANAC58  --------->WOX13(1)  --   acaagtctattaaaaattattagctaatagaagtagaacctactaagctatattgtcgtcaacaagaaccatttttaaattcaattaaatataacattaa  29509000                                                                    <---------ARR11(3)                                                                   --------->YAB1                                                                ---------->DOF2 ------>NtERF2                                                --------->ANAC58 ---->DOF2                                                    --------->ANAC58                    <-- ----DOF5.7(2)                                       <---------ANAC55(2)                          --- -------->DEAR3(1)                                   ----------->GT1--------->ARR11(3)            <-- ->DOF5.7(2)                             --------->ANAC55(1)--------->ANAC58                      --- >TOE1(3)                                <---------ANAC55(2)--------->ANAC58                   ------ >TOE2(3)                                --------->ANAC46 <---------ALFIN1              <-----------GT1 -------->RAP2.3(3)        --------->AtMYB61         --------->ANAC55(2)             <---------AHL20(2) ------->ORA47(2)     --------->ARR11(3) --------->ANAC55(2)--------->ANAC46   <----------DOF2-------   cgccgactaatctagtttatgaaatatcaccaaaactttgaacacataatgagtctcgtaacacaccaaagatactaacttctttatttttttccattaa  29509100        --------->At5g28300                                                   ----------->GT1       ----------->GT1                                                        --------->TOE2(3) -------AHL20(2)                                                 <---------AHL20(2) ------>AHL20(1)                                                 --------->AHL20(2) -------AHL20(1)                               ----------->RAV1(1)---------->DOF2   ---------->DOF2 ------>AHL20(2)                   --------->ICU4          --------->CCA1(2) ----------->GT1     <--- --->YAB1                    <---------ZAT14  <----------ID1<-------TEIL <---------AHL20(2)<---------YAB1 -->AHL20(2)    <---------YAB1     <---------ATHB51   ---------->DOF2    --------->AHL20(2)--------->ICU4   taaatttgatggtaaattacgaatattggactatacaattatgcaaatgcgacaaacaaagatacaattaaagaataaaatgttaaaaaagacattattc  29509200                                                                                                    <                                                        <----------DOF2                             -                                                        ------>ZmHOX2a(1)                           <                         ------->GAMYB       <----------TaMYB80      ------->GAMYB             ------                         --------->RAP2.6(2)--------->ARR14(2)      <---------MYB52(2)      ---------                      --------->ARR14(2)    <---------ARR14(2)      --------->MYB46(3)      ---------                      <---------ARR14(2) <---------ANAC58        <---------WRKY45           ---------            <---------ANAC58             <---------ANAC58        <---------WRKY12           ---------            <---------ANAC58         --------->ARR11(3)<---------------AGL15                ---------       <---------DEAR3(1)--------->DEAR3(1)<---------CCA1(2)     <---------WRKY38(1)       <---------TOE2(3) ------>ZmHOX2a(2)    --------->MYB52(1) <---------ANAC46       --------->WRKY18(1)     <---------AHL20(2) ------YAB1<---------MYB46(3)        <---------ARR11(3)--------------->AGL15       --------->TOE2(3)-   tgatccaactcggtgcttaagacaaaaccgccttcacaagatttcgtatattctaatccttttttggtcaacaaacaaaaaaaaacataaataaacgtaa  29509300                                                  <---------ANAC46                                                --------->REM1(2)                                               --------->ALFIN1 ---------bZIP60(1)                           <-------MYC2 -------->bZIP60(1)                           ------->MYC2 ---------O2                                  <-------PIF5 --->MYB52(1)                                 ------->PIF5 >ANAC58                                      ------->MYC3                               <---------CCA1(2) >ANAC55(2)       ----------->GT1             <-------MYC3---------->DOF2   <---------GLK1(2) >ANAC46    --------->ANAC46        ---------->DOF2   <------ZmHOX2a(1)   ----------------------->TaNAC69(2) >ANAC58<-----------GT1      --------->ANAC46<---------ANAC58     ---------->DOF2    <---------ANAC58 >ANAC55(1) --------->ANAC58 --------->ANAC58<---------ANAC46  --------->ANAC58      <---------ANAC58 -------->O2--------->ANAC58 --------->ANAC58<---------ANAC58  --------->ANAC58 <----------DOF2   cgacgtcgttttacacgaaaatgaaaaacacacgcgaagaaagaagcgcgtggagaggaagaaagaagcaaagagttggattctttggctcgtctcttac  29509400                      <---------GLK1(2)                                                 --------->LBD16                     <---------At4g35610                                               <---------ANAC46                <----------DOF2                                                     <-----------GT1         ------>ZmHOX2a(1)                                                      <---------ARR11(3)       <---------ANAC58          <---------ICU4                                 --------->ARR11(3)       <---------ANAC58       --------->ANAC46                              --------------------->WRI1       <---------ANAC46     <---------ALFIN1                              --------->At4g35610     <---------ARR14(2)   *TSS--------->bZIP60(2)                         <---------At4g35610      <-   tccatcgtttcctgttcccttttagcttctccacatcatcaccatctctctctctctctctctctctctctctctcttctgagatttttccgtcgaaata  29509500                                                                                       --------->ZAT14                                                                                   --------->ANAC58                                                                          ---------->DOF2                                                                        --------->ANAC58          <--                                                                        --------->ANAC46         <---                     --------->ARR11(3)                       <---------AHL20(2)   --------->ANAC46               <---------ARR14(2)                          ------->TEIL --------->ANAC58         ----               --------->ARR14(2)                 ---------->ID1   <---------AHL20(2)  <---------ZAT14 ---------->DOF2--------->CCA1(2)                <-----------GT1  --------->AHL20(2) --------->ANAC46 --------AHL20(2)<-------TEIL              <---------MYB52(1)--------->AHL20(2)    --------->ANAC58 <   ttaaaaagaaatttgcagatacagaacttgttctaatctctctctgttttttttccctatgaattttatataatacgaaagagacacacaacactgtatt  29509600    <---------ANAC58    <---------ANAC58            --------->ZAT14                                               <------   <------------------------ANAC81                                                          --------- -------YAB1                    <---------ZAT14                  --------->WRKY12           ========= ------ARR11(3)              <---------------AGL15------>ZmHOX2a(2)                         --------- ----->ARR11(3)             --------->ZAT6    <---------YAB1    --------->DOF5.7(2)     ------>ZmHOX2a(2) ----------DOF2      <----------DOF2   ---------->DOF2<---------CCA1(2)               --------->ARR11(3)   atctttgcttctctcttctctctctttctatctctacagagtaaagttctgatcgtgtctcttatcgtttacccaaaaacccttgtttgatctctcgtct  29509700                                                                 <----------DOF2                                                            <---------ANAC58                                                            <---------ANAC58                                                            --------->ANAC55(2)                         <---------TOE1(3)                 --------------->AtSPL8          <---------ZAT18<---------TOE2(3)                 --------------->AtSPL3 ---CCA1(2)   <---------HSFB2a(2)                     <----------DOF2 >O2   <---------At4g35610                    <-----------GT1--------->LBD16--------->ARR11(3) ==========================================bZIP_DOF------>ZmHOX2a(1)     --------->YAB1 >TGA1a--------->At4g35610      <----------DOF2<-----------GT1   <---------DAG2      ----------->GT1   cttgttttcttctgccctcgaagttttcaggtttctttcttctccgatttatccttctttttccgtacttttttatcagaacttgtagggtttcttctgt  29509800                                      <---------ANAC55(1)                                      <---------ANAC55(2)                                      --------->ANAC55(1)                                      <---------ANAC46                                      ----------->GT1                                      --------->ANAC55(2)                                      --------->ANAC58                                      <---------ANAC58                                      <---------ANAC58                                      --------->ANAC58                             ----------->GT1                             --------->ANAC55(2)                             <---------ANAC55(2)            --------->ARR11(3)        --------->ANAC46                  ------>MYB46(1)            <---------AHL20(1)      <-----------GT1                     ------>MYB83            --------->AHL20(1)--------->TOE2(3)         <---------TOE2(3)   --------->LBD16     <---------LBD16         --------->ANAC55(1)    --------->YAB1      --------->ZAT2    <---------ANAC46         --------->ANAC58 <---------TOE1(3)      --------->MYB46(3)    <---------ANAC58         --------->ANAC58 <---------TOE2(3)    <-----------GT1                  <    <---------ANAC58        <-------TEIL   --------->ICU4       --------->ANAC55(2)                 <   ttcaattcgtggaatattttgcaacttcgatacgtaaattacgtaattagggtttgataatgttttatgtaaccagccccgaattgaattagttccaaag  29509900  Previous    Next  AGI:  At1g78420.1    Description:  protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G17145.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63579.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 29509426    to: 29512379    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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