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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------->
TEIL
--------->
ANAC58
<---------
ANAC55(2)
<---------
ANAC58
<---------
AtLEC2
<---------
ANAC58
---------
ANAC58
<---------
ANAC46
--
---------
ANAC58
--------->
At4g35610
<---------
ANAC58
<---
---------
ANAC46
<---------
At4g35610
<---------
ANAC58
--------->
AHL20(2)
----
ICU4
--------->
ANAC55(2)
--------->
MYB52(2)
<---------
AHL20(2)
>
YAB1
--------->
ANAC58
<---------
MYB52(1)
<---------
MYB52(1)
--------->
MYB59
----
tgccttgcatggcacgtatgt
ctgatcacagtttgtccaaaaaaaacaattagcaatacatcattcgttttttgcttatatagttagggaattatatagt
29472900
<---
----
----------->
HVH21
------>
ZmHOX2a(2)
--------->
At4g35610
<------
ZmHOX2a(2)
<---------
ARR11(3)
<---------
AGP1
---------->
DOF2
--------->
GLK1(2)
----------->
GT1
<---------
ANAC58
<---------
ARR14(2)
--------->
MYB52(1)
<---------
ANAC58
--------->
ARR11(3)
--------->
ARR11(3)
<---------
ARR11(3)
--------->
ARR14(2)
<---------
ARR11(3)
--------->
ARR11(3)
<------
ZmHOX2a(1)
-------->
DOF2
--------->
TOE2(3)
--------->
GLK1(2)
<--------
P
<----
------
ZAT14
<---------
ANAC55(2)
<---------
At4g35610
--------->
At4g35610
<-----
----->
ZAT18
<---------
TOE2(3)
<-----------
GT1
--------->
At4g35610
<---------
At4g35610
<-----
gcaaagaactcaataacgtaaaagaaaaaatgtaac
cttcttgtcgatgtaatctgcccaaaatctagcttgagctctctggtaaggatctgaaggaaga
29473000
--------->
HSFC1(2)
--------->
HSFB2a(1)
--------->
ANAC58
<---------
HSFB2a(1)
--------->
ANAC58
<---------
HSFC1(2)
>>>>>>>
GRF7
------>
ZmHOX2a(2)
--------->
GLK1(2)
<-----------
HVH21
<------
ZmHOX2a(2)
--------->
ARR14(2)
------
ARR14(2)
--------->
ARR14(2)
<---------
ARR14(2)
----->
GLK1(2)
<---------
ARR14(2)
<---------
LBD16
-----
ARR14(2)
<-----------
GT1
--------->
AHL20(2)
----
HSFC1(2)
<---------
ZAT14
<---------
GLK1(2)
--------->
TOE1(3)
<---------
GLK1(2)
----
HSFB2a(1)
---------->
DOF2
--------->
ANAC46
--------->
ARR14(2)
--------->
TOE2(3)
--------->
LBD16
atcgggtttgtgtcaggccaaagctcgtcgatatactgaacttggattatcgattcgcagatcggtttaccttcatgaattaaaaccggaatcttcttgt
29473100
<---------
ZAT14
--------->
ZAT14
<------
ZmHOX2a(2)
--------->
ARR14(2)
--------->
ARR14(3)
<---------
ARR11(3)
--------->
AGP1
--------->
ARR11(3)
<---------
GLK1(2)
--------
<-----------
ARR10
<---------
ANAC58
<----------
DOF2
------>
ZmHOX2a(2)
------>
ZmHOX2a(1)
--------->
At4g35610
<---------
ARR14(2)
<---------
DAG2
--------->
ANAC58
----------->
RAV1(2)
<---------
ARR14(3)
<----------
DOF2
--------->
ANAC58
--
<---------
At4g35610
<---------
CCA1(2)
<-----------
GT1
---------->
DOF2
-----
<-------
TEIL
---------->
DOF2
----------->
ARR10
--------->
YAB1
<-----------
GT1
<---------
ANAC58
gaatagggttcatctgaagaagtaaagggcttttgttactcagatcttcttctctatactcatatttcacttttttctcctccaaagcaatccttgtcct
29473200
<---------
DEAR3(2)
<---------
DREB2C(2)
<---------
DEAR3(1)
<---------
DEAR4(1)
<---------
At1g77200
<-----------
HVH21
<-------
TEIL
<-----------
RAV1(1)
--------->
LBD16
--------->
At4g35610
<---------
ANAC55(2)
--------------->
AGL15
<--------
--------------->
AtSPL3
========================================================
-->
ID1
--------->
YAB1
--------->
GLK1(2)
<---------
At4g35610
---------
---------------->
SPL14
<------
ZmHOX2a(1)
<-----------
GT1
*
TSS
----------->
GT1
<-
->
ZmHOX2a(1)
<---------
ATHB12
------>
ZmHOX2a(1)
---------->
DOF2
<---------
MYB111(1)
catcccgtacatactcgcccaataatccaataggataatctcttcctccat
ttttagctgtcggtgt
gaaagaagagagagtggtaactactcactatat
29473300
<-----------
GT1
<
---------->
DOF2
<---------
ARR11(1)
<----------
DOF2
<
-------
AGL15
--------->
GLK1(2)
--------->
ARR11(3)
----------
=======
MADS_MADS
<-----------
ARR10
<---------
ARR11(3)
<----------
DOF2
<
------>
AGL15
------->
TEIL
<---------
YAB1
<-----------
GT1
<---------
ZAT18
--------->
DAG2
---------
ID1
<---------
ARR14(1)
--------->
YAB1
--------->
ZAT18
---------->
DOF2
agagccaaaataaagaagagtttcgaatctaattctccattttcattatctttttttacaaaagattagaataagtggacatgctttggaaaaaggcaaa
29473400
-------->
ATHB1
--------->
ATHB51
<--------
ATHB1
<---------
ICU4
<------------
ATHB5
--------->
ATHB12
<---------
YAB1
--------->
AHL20(2)
---------->
DOF2
---------
ANAC46
<---------
ATHB51
<---------
WOX13(1)
---------
ANAC58
--------->
ICU4
--------->
ATHB12
->
GT1
----------->
RAV1(1)
<---------
TOE2(3)
---------
ANAC58
------------>
ATHB5
<---------
YAB1
<---------
YAB1
ttgcctatagccacaataaaacgaacaattattggacaaaaattttgatcaaatttaggcttatgattgaattgatataatgtgtttgggatttttgttt
29473500
<----------
DOF2
--------->
At4g35610
<---------
DAG2
----------->
RAV1(1)
<----------
DOF2
--------->
MYB46(3)
<---------
ANAC46
<-----------
GT1
<---------
YAB1
--------->
ANAC58
<---------
ANAC58
<---------
YAB1
<---------
YAB1
--------->
ANAC46
<---------
ANAC58
<-------
TEIL
<----------
DOF2
--------->
AHL20(2)
--------->
ANAC58
<---------
YAB1
gagaaatgcataatatgaatactttatacgtttggagacaatattatgactttttcagttttctaacaagcaccagactttttttaaaattgacttgtgc
29473600
--------->
ANAC58
<--
--------->
ANAC58
------
----------->
HVH21
<------
<---------
WOX13(1)
<------
MYB46(1)
-------
<---------
ANAC58
<------
MYB83
-------
<-------
TEIL
<---------
ANAC58
<---------
YAB1
----------->
GT1
--------->
CCA1(2)
<------
ZmHOX2a(1)
--------->
ANAC46
----------->
GT1
-------
------->
TEIL
---------->
DOF2
<---------
YAB1
<---------
AHL20(2)
---------
ctctatgagcctagatacaacattgtaagtcttaaagagagaggaacaatattcttgagtgacaagaaacaaatattatttggtgaaaatagaaaaaagg
29473700
--------->
ANAC58
--------->
ANAC58
==============================================
MYC_MYB
------->
GAMYB
--------->
MYB46(3)
<---------
AHL20(1)
<-
--------->
ANAC58
--------->
TOE1(2)
<---------
AHL20(2)
<---
--------->
ANAC46
<---------
O2
--------->
AHL20(1)
-----
--------->
ANAC58
--------->
O2
<---------
AHL20(2)
-----
-----
TEIL
<---------
ANAC55(2)
<---------
AHL20(2)
<----
----->
GT1
--------->
TGA1a
--------->
AHL20(2)
<----
---------
AtSPL8
<---------
AHL20(2)
<---------
AHL20(2)
-----
-------->
AtSPL8
<---------
AHL20(2)
----------->
GT1
<----
-->
DAG2
--------->
AHL20(2)
<---------
REM1(1)
--------->
AHL20(2)
------
-------->
AtSPL3
----------->
GT1
<---------
TGA1a
--------->
YAB1
--------
->
DOF2
<---------
ARR11(3)
------->
TEIL
--------->
At4g35610
<---------
AHL20(2)
--------->
AHL20(2)
tacaaccaagaaatttcatatcgaaataaatgaacatagaaacgtgagatgtagtaaattatattttttaaatccaaaatactattttttaaaaaaaata
29473800
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AGI:
At1g78320.1
Description:
ATGSTU23 (Arabidopsis thaliana Glutathione S-transferase (class tau) 23); glutathione transferase. similar to ATGSTU25 (Arabidopsis thaliana Glutathione S-transferase (class tau) 25), glutathione transferase [Arabidopsis thaliana] (TAIR:AT1G17180.1); similar to glutathione transferase [Carica papaya] (GB:CAA04391.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like (InterPro:IPR010987); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Glutathione S-transferase, N-terminal (InterPro:IPR004045); contains InterPro domai
Range:
from: 29472330
to: 29473267
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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