Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------TGA1a                                                                  --------->O2                                                                  <---------O2                    <--                                                                  --------->TGA1a        <------NtERF2                                                               <---------DEAR3(1)      <---------ANAC46        --------->At4g35610                                    --------->DEAR3(1)      <---------DEAR3(1)        <---------At4g35610                                 <---------ANAC46          <---------MYB52(1)  <---------AtLEC2                                     <---------ANAC58              <-----------HVH21 --------DOF2                                          <---------ANAC58     --------->ANAC58      --- --->ARR11(3)                 ----------->GT1      <---------ANAC58         --------->ANAC58--------- ----ARR11(3)    <---------MYB52(1)                <---------ANAC58         --------->ANAC46<--------   ctttgaatggagctaaacagttgtttattgtggagtcaataagcttgagcatgtcttgcttagcgtcgacgtctgtccaaggaagaccgtcggggatagt  29456900                                           --------->ATHB12                                         ------->PIF5                                         ------->MYC3          ====================================MYC_MYB                                         ------->MYC2         --------->MYB52(2)                                         <-------MYC2         <---------MYB46(3)                                         <-------MYC3         --------->MYB55(2)                                         <-------PIF5--------->CCA1(2)                          <----                                        --------->ANAC58     <---------AtMYB61                  -----                                        --------->O2 --------->ARR14(1)                         -----                                        <---------O2<---------ARR14(2)                   <---------ANAC55(1)                                        --------->ANAC58     --------->ALFIN1            <---------TGA1a                                        --------->bZIP60(2) <-------GAMYB                <---------ANAC58                                        --------->ANAC55(2) =======================================MYC_MYB                                        ============================MYC_MYB              <---------O2                                        --------->TGA1a     <------NtERF2                <---------bZIP60(2)                                        <---------ANAC55(2)<---------MYB46(3)            --------->TGA1a                                        <---------TGA1a   <---------DREB2C(2)            --------->O2                                        ============================MYC_MYB              <---------ANAC46                                      <-----------RAV1(2) --------->ALFIN1            ----------->HVH21                               --------->ALFIN1     --------->ARR11(1)  <------MYB46(1) ----------->STF1                              <-----------HVH21     --------->ARR14(2)  <------MYB83  ----------->TGA1                             <---------ANAC58      <------ZmHOX2a(1)   <---------DEAR3(1)<---------ANAC58 -------HSFB2a(2)            <---------ANAC58<---------WOX13(1)<-------GAMYB      =================bZIP_DOF ------>HSFB2a(2)     <---------MYB52(1)--------->ANAC46  <---------DEAR3(1)      ---------->DOF2 >ARR14(2)           <-------GAMYB    <---------ALFIN1--------->SPL7   <---------DREB2C(2)      <---- -ARR14(2)           =============================MYC_MYB<---------ABI4(1)--------->ALFIN1 --------->ALFIN1   ctcgaagcgaaacgaggggagaccgttgagagcgtgagggccacgtgattggaggatacggcggtggttgtagtcggtgttgacgaaagtgacgtggaag  29457000                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----             --------->ZAT2                                                                      ----            <-----------ARR10                                            <---------ANAC46        ----           <------ZmHOX2a(1)                                             <---------ANAC58        ----      --------->ALFIN1                                                   <---------ANAC55(2)    -----    <---------ANAC58                                                     <---------ANAC58       -----    <---------ANAC46                                               ------->TEIL               -------    <---------ANAC58                    <-----------RAV1(1)   --------->CCA1(2)          --------->At4g35610 -----HSFC1(2)<---------ANAC58          <---------bZIP60(2)<---------TOE2(3)             <---------At4g35610 ---->HSFC1(2)<---------ANAC58          <---------REM1(1)  <---------TOE1(3)           <---------ZAT18 ---->HSFB2a(1)                     <--------P             --------->DAG2--------->ANAC55(2)  <------ -----HSFB2a(1)                    <-------GAMYB     <---------ANAC46    <---------ANAC55(1)  <<<<<<<ZML2   cctctagcgtggaggagcttggctagtttcagcattgggttgatgtggccttgtgctggataaggtatgcacattgcgtgaggtttctgtgagctagaac  29457100                                                                                        --------->ATHB12                                                                                        <---------ICU4                                                                                        --------->ATHB51                                                 --------->ANAC55(2)                   <---------ATHB12                                       --------->ICU4                                  <---------ATHB51 ----->DEAR3(1)                        <---------YAB1                                  --------->ICU4 ----->ANAC46                       --------->ICU4                            <---------ARR14(2) ----->DREB2C(2)                    <---------YAB1--------->LBD16             --------->ARR14(2) ----->RAP2.6(2)                  --------->YAB1 --------->ANAC58        <---------ANAC58 ----->ANAC58                    <---------YAB1  --------->ANAC46        <---------ANAC58 --->GAMYB                     --------->YAB1    <---------ANAC55(2)     <---------ANAC46 <---------WOX13(1) ----->ANAC58                 --------->ICU4     --------->ANAC58    --------------------->WRI1 ---->MYB46(3)              <XXXXXXXXXXXXXXXXXXXXMIR414         --------->ANAC58       <---------YAB1 ---->DEAR3(2)          ----------->TGA1  <---------WOX13(1)    --------->ANAC58<---------ANAC58 -->ARR14(2)        <---------TOE2(3)--------->YAB1             --------->ANAC46<---------ANAC58 ---ARR14(2)   ------>ZmHOX2a(1) --------->ICU4 <---------LBD16--------->WOX13(1)   ------------>ATHB5   cgccatgttgttccatccttttgacgatgacgatgatgatgatgatggattccgcaacgttgagtcactcaacttgagtgtatcgtcccataattgatag  29457200                                                                                             --------                                                                                        <---------RAP2.6(3)                                                                                        ------>NtERF2                                                                                       --------->ANAC46                                                                                       >>>>>>>>>AtERF-3                                                                                       --------->DEAR3(1)                                                                                       --------->RAP2.3(3)                                                                                       >>>>>>>>>AtERF-1                                                                                       >>>>>>>>>AtERF-4                                                                                       >>>>>>>>>AtERF-2                                                                                       --------->RAP2.3(2)                                                                                 --------->YAB1                                                                           <---------YAB1<------NtERF2                                                                    <---------MYB52(1) --------->RAP2.6(2)                                                                  <---------MYB46(3)   >>>>>>>>>AtERF-5                                                                ---------->ID1  <---------YAB1                                                            <---------ANAC55(2) <---------AHL20(2)                                                            <---------ANAC58   --------->AHL20(2) <--                                                            <---------ANAC58--------->AHL20(2)-------                       --------->ARR14(2)           <------ZmHOX2a(1)   <---------YAB1--------->ERF1          ----------->GT1                        <------ZmHOX2a(1)<---------DEAR3(2)  --------->RAP2.3(1)   tggaagaagagagagtgatactttggaacctcttggtatagttttggatgaggaggaagaatacttgtcggtttgtgattatataatagccgccataagg  29457300                                           <------------CBF                                 ---------->DOF2                              <----------DOF2                              <---------DAG2                             <------NtERF2<---------ICU4                            <---------RAP2.6(3)        <---------ANAC55(2)                            ------>NtERF2 --------->ATHB12  <---------ANAC46                           --------->DEAR3(1)          <---------ANAC58                           --------->RAP2.6(2)         <---------ANAC46                          <---------RAP2.6(2)          <---------ANAC58--------->At4g35610--------->AHL20(2)                      <------------CBF    --------->ATHB51  <---------ANAC58     ---------->DOF2                    <---------AHL20(2)   <---------YAB1--------->O2    <---------At4g35610--------->ATHB51 -->DOF2            --------->AHL20(1)   <---------ATHB12   <---------ANAC58     --------->SPL7 -----TEIL          --------->AHL20(2)   <---------ATHB51  ---------->ID1      <---------SPL7 -->DAG2  *TSS     --------->AHL20(2)    --------->ICU4--------->ANAC55(2)    <---------ANAC46   ctcgtttcaaaaaaaaaaaaaaaaaattgccgccttaaggcccataattgaaagactacgtgtcgttttagttatctgcgtcgtaaggcccataatttag  29457400                                                                          <---------At4g35610                           --------->LBD16        ---------->ID1          --------->At4g35610                          --------->LBD16        <-----------GT1         --------->ANAC58                         --------->HSFB2a(2)    *TSS                     --------->ANAC58                      --------->ARR14(2)        <-----------GT1      <---------ANAC46                   <---------TOE2(3)        <----------DOF2          <---------ANAC55(2)          ---               <------------CBF       <---------ARR14(2)             <---------ANAC58            <---              --------->ATHB12     <---------ANAC46     --------->HSFB2a(2)                      <---              <---------AHL20(2)   <---------ANAC58  <----------DOF2 --------->ANAC55(2)      -------             <---------AHL20(2)    <---------ANAC58  ------>ZmHOX2a(1)  --------->SPL7  <-------TEIL    <------NtERF2  <---------TOE1(3)  --------->ARR14(2)<---------HSFB2a(2)     --------->ANAC46 ----  <---------DEAR3(1)  <---------ARR14(2)  ------>ZmHOX2a(1)          <---------ANAC58  <-----------ARR10   aacgtcgtcgttttatttattgaggttcccgagttttgcgtttcctctttttatccttttagaaacgatttgcgtaagctaaacgcgaggttcttatcag  29457500                                                                                   --------->ANAC58                                                                                   <---------bZIP60(1)                                                       --------->ANAC58            --------->ANAC58                    <---------MYB52(1)                 --------->ANAC58            --------->bZIP60(1)                   --------->At5g28300               --------->ALFIN1           ----------->HVH21                  --------->RAP2.6(2)               ------->MYC2         <---------ALFIN1                  ----------->GT1                   <-------MYC3        --------->ZAT18                 --------->RAP2.3(1)                ------->MYC3        <---------ZAT18             <                 <------NtERF2                      <-------MYC2       --------->ANAC58            -- ------>GLK1(2) ------>NtERF2                  --------->SPL7     --------->ARR14(2)           ------ ------GLK1(2) --------->ANAC46         <---------DOF5.7(2)       <---------ARR14(2)         <------- ------ARR14(2)<---------DEAR3(1)     --------->DOF5.7(2)  ---------->DOF2      ----------->TGA1   <- -->YAB1   --------->DEAR3(2)        --------->TOE1(3)--------->ZAT18  --------->ANAC58     <------ZmHOX2a(1) ----->ARR14(2)--------->DEAR3(1)    --------->TOE2(3)--------->SPL7   --------->ANAC46     =========   attctatcgttgaaacgacgccgtaacttaattcgatatcgttaacgcgtacaacgtgcgccaaagcatttacgcgcactcggtgacgaaacgaggactc  29457600                   ----------->GT1              --------->DEAR3(1)             <------NtERF2            ------>NtERF2            --------->ABI4(1)           --------->DEAR3(1)          --------->ATERF1(1)          <------NtERF2          ----------->HVH21          <---------ABI4(2)         ------>NtERF2         <---------ATERF1(1)         <-----------HVH21        --------->ANAC58        --------->ANAC46        --------->ANAC58      --------->ANAC58      --------->ANAC58      --------->ANAC55(2)      <---------ANAC55(2) --------->DAG2                               ------>ZmHOX2a(2)      --------->ANAC46   ---------->DOF2                         <---------ATHB12 --------->YAB1 <---------ANAC46                            --------->ANAC58 ------ZmHOX2a(2)  --------->REM1(2)                        --------->ANAC58 ------->ARR14(2)<-------MYC3                              --------->DAG2 ----------------->TaNAC69(2)                             ---------->DOF2 --ARR14(2)<---------ALFIN1                         ----------->GT1   <------ZmHOX2a(2) --------ARR14(2)------->MYC3                   --------->LBD16--------->WOX13(1)         --------->GLK1(1) ======HOX2a_HOX2a--------->ALFIN1             <-----------RAV1(2)--------->YAB1   --------->GLK1(1)   ggatcatcacgcgccaccgcgtggagaaaaagcttgagttttcaaaattccaggtagtaaaaaagcaatcagatcgcagagagagaaatcgaaattccat  29457700                                        --------->ORA47(1)                                        ------>NtERF2                         <------ZmHOX2a(1)    --------->ARR14(2)                         ==================HOX2a_HOX2a                         =================HOX2a_HOX2a                        <----------ID1 <---------ETT(1)                     <---------MYB52(1)--------->DEAR3(1)              --------->YAB1---------->DOF2   <---------GLK1(2)        -------->P                ----             <---------ATHB12          ----------->HVH21          <---------ZAT14                ----             ----------->HVH21      ------>ZmHOX2a(2)             --------->ZAT14      --------------             ----------->TGA1      <------ZmHOX2a(2)   <---------MYB52(1)  --------->At4g35610   <---   tgaagcttatagccaatgacgacgttaggacaaagagatcgccgaccagatgctctcggtagtctcagtgttctaccagatgagaccatctgtgttcttc  29457800  Previous    Next  AGI:  At1g78270.1    Description:  ATUGT85A4 (UDP-GLUCOSYL TRANSFERASE 85A4); UDP-glycosyltransferase/ glucuronosyltransferase/ transferase, transferring hexosyl groups. similar to ATUGT85A1/UGT85A1 (UDP-GLUCOSYL TRANSFERASE 85A1), UDP-glycosyltransferase/ glucuronosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT1G22400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61708.1); similar to glycosyltransferase [Nicotiana tabacum] (GB:BAD93690.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) Range:  from: 29455456    to: 29457310    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g78265.1    Description:  other RNA Range:  from: 29455665    to: 29457198    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g78280.1    Description:  transcription factor jumonji (jmjC) domain-containing protein. Identical to F-box protein At1g78280 [Arabidopsis Thaliana] (GB:Q9M9E8); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G06550.1); similar to hypothetical protein OsI_011531 [Oryza sativa (indica cultivar-group)] (GB:EAY90298.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61686.1); similar to hypothetical protein OsJ_010658 [Oryza sativa (japonica cultivar-group)] (GB:EAZ27175.1); contains InterPro domain Transcription factor jumonji (InterPro:IPR013129); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Protein k Range:  from: 29457448    to: 29462266    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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