Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->WOX13(1)                                                                 <---------AHL20(2)                                                                --------->AHL20(2)                                                             --------->AHL20(2)                                                          --------->TOE1(3)                                                          --------->TOE2(3)                                                       -------->P--------->AHL20(2)                                                      ------->GAMYB <---------ATHB12                                                     --------->MYB46(3)                   --------->ANAC58                  --------->AtMYB61                   --------->ANAC58                  <---------MYB55(2)               ------>MYB83      --------->GLK1(1)              <----------ID1  <---------MYB111(2)              ------>MYB46(1) -->GT1         --------->TOE1(2)--------->DAG2      <---------MYB111(1)            --------->AtMYB61 -AG  <---------GLK1(1)     --------->LBD16          <---------MYB52(2)     <---------KAN4(2) -------   actcgtggaaatcgaaatcgaacgaaaacccagaaaaattggacaaaaaaccccaacaacccttaaattaatcaagcgaataaacaccaaatcgaatcaa  29441000                                                      --------->ZAT14                                                      <---------ZAT14                                                      --------->ZAT2                                                      <---------ZAT2                                     --------------->AtSPL8                                     <---------------AtSPL8                                     --------------->AtSPL3         --------->AHL20(2)                                     <---------------AtSPL3         <---------AHL20(2)                             --------->ANAC58      <---------At4g35610           <---------YAB1                             --------->ANAC58     --------->ANAC46<---------AHL20(2)                        ---------->DOF2    <----------DOF2        --------->AHL20(2)            <----       ------------------------>ANAC81     <---------DAG2       --------->AHL20(2)  <---------YAB1 -->YAB1              <------ZmHOX2a(1)  <---------TOE1(2)      <---------AHL20(2)--------->YAB1-----   aatcaagaagatgaataagagtgaggaaaagaagcaaaaatcgtacttttctacgctgctctgtatatatatatatacaaacgattataaatctggagat  29441100          --------->DAG2         ---------->DOF2     --------->At4g35610     <---------At4g35610                  <---------GLK1(2)               --------->ZAT6 -----GLK1(1)                  <---------ARR14(2)                --------->LBD16                  --- ---->GLK1(1)         --------->KAN4(1)--------->YAB1            --------->HSFB2a(2)         <-------   ttccctcagcaaaaagttgatggaatattggagaatactaatcagattgtgtcttcttcaatttctccgagagctatcactctcactctctctctcttta  29441200                                                                         <---------GLK1(2)                                                                         --------->ARR14(2)                                                                         --------->ARR11(3)                                                                         <---------ARR14(2)                                                                         <---------ARR11(3)                                                                       ----------->ARR10                                                                  <---------ANAC46                                                                  <---------ANAC58                                                                  <---------ANAC58                                                                 --------->ALFIN1                   <                                                                 --------->ATERF1(1)                -                                                                 <------NtERF2                      <                                         --------->ALFIN1       <-----------HVH21     ------>ZmHOX2a(2)                               <---------ZAT2                 --------->ATERF1(1)   ------->TEIL<----                               --------->At4g35610           <---------ATERF1(1)    <---------ARR14(2)                               --------->ZAT2              <-----------RAV1(2) <---------AtLEC2<----- ------>ZAT6                   <---------At4g35610     XXXXXXXXXXXXXXXXXXXX>MIR164A/B<------ZmHOX2a(2) ---DOF2                   <---------REM1(1)        <---------ZAT14 --------->AtLEC2--------->ARR14(2)   tctctatctctctctgtatatcaagagagttgaagctggaacagtgggagagagtgaagaagcaggcgtcgtgcagattttgtatggatccaatctcgac  29441300                                                                      <---------AtMYB61                                                                    <----------DOF2                                                                   <---------ANAC58                                                               <---------MYB52(1) ---------ZAT2             --------->AtMYB61                 <---------ANAC58 -------->ZAT2    <---------AHL20(2)                         <---------ANAC58                -------- ---------At4g35610   <---------AHL20(2)               <---------ALFIN1      *TSS      ---------->DOF2 -----ALFIN1      --------->ATHB51                <---------TOE2(3)<---------ANAC58---------->DOF2 ----REM1(2)      --------->AHL20(2)        --------->AHL20(2)<-------GAMYB  <---------AHL20(2)   acagctcgtgagacactgaattatttaaaccaaaacaaacaaaaaatgaattaagaaacacttccgttggctttggtatataaacaaaagaaagagagta  29441400                                                          <-------TEIL                                             --------->HSFB2a(1)                                             --------->At4g35610                                             <---------HSFB2a(1)     <---------------AtSPL8       --------->At4g35610                   <---------HSFC1(2)      --------------->AtSPL8 ---------       <---------At4g35610                   --------->HSFC1(2)      <---------ICU4   <---------ICU4 --->GT1                                    <-----------ARR10       --------->ICU4<---------ZAT6    <   aattagttgagatgcctaagcgtatttaaggggggagaacgaagagaagcttcccatgggtacatgtctaattagtactatctactgctaattactagta  29441500                                                                                                 ----                                                                                                 <---                                                                                           --------->CCA1(2)          <-----------GT1                 <---------TOE2(3)                               --------->AHL20(1)    --------->YAB1                      <---------AHL20(2)                           --------->AHL20(2) --------->YAB1  --------->ANAC58   <---------DAG2        <----------DOF2<<<<<<<<<TBF1 --------->AHL20(2) ------>AtSPL8   --------->ANAC46   <----------DOF2      <------------------------ANAC81 --------->AHL20(2) ---------YAB1   --------->ANAC58<-----------GT1  <-----------GT1   <----------DOF2  <---------AHL20(2)   ctataatcgtattaacttcacgctctgttttctttctactttttaatgttttttacctctctttctgtctctttcttcttcccataaaaaaatatatgaa  29441600                                                                                                    <                                                                                                    -                                                                                                   --        <-------TEIL                                   <---------ETT(2)                     <--------      <------NtERF2                               <---------WOX13(1)                        >>>>>>>>>      --------->At5g28300                  <---------ZAT18                                  >>>>>>>>>     <---------MYB46(3)                    <---------ZAT14                                  >>>>>>>>>     <---------ORA47(2)               <---------AHL20(2)                                    >>>>>>>>>     <---------DEAR3(2)           --------->AHL20(2)   <---------WRKY38(1)                 --------->WRKY38(1)    <---------DREB2C(2)           <---------AHL20(2)   --------->ETT(2)                    --------->WRKY45    <---------DEAR3(1)         <----------DOF2  --------->ATHB12                           --------->WRKY12 ----->ARR11(3)          --------->AHL20(2)--------->ZAT18                              <---------MYB46(3) ------ARR11(3)          <---------AHL20(2)--------->ZAT14                   <----------DOF2>>>>>>>>>   atcttggcggtgcataaaaacaaacatttatttcttttaattaagttcactaattggtcgactgaaaaattagaagatgctttatagtagtagttgacca  29441700 ---------AHL20(1) -------->AHL20(1)                                                             --------->TOE1(2) ------->YAB1         --------->YAB1                                          --------->YAB1 -WRKY18(1)        --------->YAB1                                        --------->WRKY18(1)  ------- >WRKY38           <--------ATHB1                 ------->TEIL         <------MYB46(1)       <------- >WRKY6           <---------ATHB51            <---------TOE2(3)        <------MYB83        ---------- >WRKY11          <---------ATHB12          --------->AHL20(2)        --------->MYB59<---------GLK1(1) >WRKY43  --------->ARR11(3)                <---------AHL20(2)     <-----------HVH21 --------->GLK1(1) >WRKY26  <---------ARR11(3)    <---------------AGL15----------->GT1<---------MYB52(1)    ------>ZmHOX2a(1)   aaaatattagaagatgttcaataatagtattttgacatttatagaattaatgaaccggttgaaaaaatgtgttaggtcaaacatgagatttcctaaaggt  29441800                                                                   <----------DOF2                                                                  ------>ZmHOX2a(2)                                                                <---------ARR11(3)                                ------>NtERF2                   --------->ARR11(3)     --------->ETT(2)        --------->LBD16                   --------->YAB1       ------->TEIL     <---------ETT(2)       <---------ANAC46                 <---------TOE2(3)<-------TEIL<---------ANAC58 ---->GT1                  <---------LBD16              ----------->GT1      <--------P   <---------ANAC58 --TOE2(3)                <-----------GT1              --------->DAG2     <---------TOE1(3) >DOF2              <---------AHL20(2)                ---------->DOF2     <---------TOE2(3)   tattttgtcgatagtaaatgatttttttttacggggactgttttttttttatgtagaaaagttaatgatcttttttaaggtagatgtatcgagcttgttt  29441900  Previous    Next  AGI:  At1g78240.1    Description:  TSD2 (TUMOROUS SHOOT DEVELOPMENT 2); methyltransferase. similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G13860.1); similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G13860.4); similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G13860.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO61711.1); similar to dehydration-responsive protein-related [Brassica rapa] (GB:ABV89659.1); similar to hypothetical protein OsI_008807 [Oryza sativa (indica cultivar-group)] (GB:EAY87574.1); contains InterPro domain Protein of unknown function DUF248, met Range:  from: 29437722    to: 29441377    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version