Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->At4g35610                                                                                           <---------At4g35610                                                                                         <-----------RAV1(2)                                                                                         ============                                   <---------ARR14(2)             --------->ANAC58    <---------ARR14(2)                                   --------->GLK1(2)              --------->ANAC58  --------->LBD16                            --------->ANAC55(2)                 --------->MYB52(1) --------->ANAC55(2)                            <---------ANAC55(2)                ----------->TGA1<---------ANAC58        <---------YAB1   <---------MYB52(1)                    ----------->HVH21   <---------ANAC46 ----MYB46(3)           <-------GAMYB                        ----------->RAV1(2)  <---------LBD16 ---AtMYB61       ---------->DOF2 <---------GLK1(2)         ------->TEIL       <---------ANAC58   tttcacgatgatgtttcccataacgccgttaagtgagaatctcttgctctctgttcttgatgagcctgacgaaatcgattttcttgcggaatcagatgat  29400600              <---------ATHB12            <---------At4g35610                               <---------ANAC46       <---------GLK1(2)                                      <---------LBD16       <---------ARR14(2)                                   <---------ARR14(2)       --------->ARR14(2)                          <---------MYB46(3)      <------NtERF2                 ----------->RAV1(2)    --------->GLK1(1)    <---------ANAC58                ===========================RAV               <---------MYB46(3)    <---------ANAC46                <---------At4g35610    <---------GLK1(1)  <----------DOF2    <---------ANAC58    --------->LBD16            <-----------RAV1(1)    --------->GLK1(1)   <---------LBD16      <---------MYB46(3)      <----------DOF2           <---------GLK1(1)  <------- <-----------RAV1(1)   <---------ANAC46        <---------ANAC58--------->HSFB2a(2)           -------- ============RAV      <---------LBD16          <---------ANAC58<---------HSFB2a(2)<-------GAMYB------   tttctggcggattccgatgattttcgcgggtgattctcatctggttttggcttttgttggggtttctgggagtcagatttctttggttgagaagaagtat  29400700                                                                                         ---------->DOF2                                              <---------ANAC46                        --------->LBD16                                      <-------GAMYB                                  --------->HSFB2a(2)                 --------->ARR14(2)  --------->MYB55(2)                              <---------HSFB2a(2)        <---------ANAC58       <-----------GT1<---------ANAC58                      <---------LBD16        <---------ANAC58       --------->MYB52(1)   <----------ARF1             <----------DOF2   <---------ARR14(2)  <---------TOE2(3)      <---------bZIP60(2)             ----------------->AGL1   --------->ARR14(2)  <---------TOE1(3)      <---------ANAC58                ------>ZmHOX2a(2) --HSFC1(2)      <---------ARR11(3)  --------->MYB111(2)        <----------DOF2 ------>ZmHOX2a(1) ->HSFC1(2)      <---------ARR14(2)  --------->MYB52(2)  --------->ANAC58   --------->ARR11(3) --->MYB52(1)   <------ZmHOX2a(1)    <---------MYB46(3)  --------->ANAC58   <---------ARR11(3)   cggtggattttcttgggaggattttagggtttgtaacggttgttgatgacttggaagacaagttatcttttgcccgatgatccttttccggtaaagaggg  29400800                      --------->HSFB2a(2)                  <---------ZAT2                  <---------At4g35610                  --------->ZAT2  --------->MYB46(3)                <---------ALFIN1 --------->ANAC58               <---------ANAC46               <-----------------AGL1                        ----------->HVH21           <---------ATERF1(1)   --------->ANAC46      ------>MYB46(1)         --------->ATERF1(1)     --------->ANAC58      ------>MYB83       <---------ANAC46         ------->TEIL         ------->GAMYB      <------NtERF2  <---------LBD16               --------->ANAC58                                 -     ------>NtERF2--------->At4g35610              --------->ANAC58                      ------------    <---------DEAR3(1)<---------HSFB2a(2)        --------->MYB46(3)                    <-----------GT1   ttttcgacggcgagggctccagctctggaaaatgcacccaaggagactctcacaaccaaatatttgacctgtagaaattttcttcgattttgccattgca  29400900       ---------->DOF2 <----------ID1 ----------->GT1                                                               *TSS ----------------------->ANAC81                                        ---------->DOF2 ----->AGL1           <----------DOF2      --------->ICU4           <------ZmHOX2a(1)              --   agaaggaaaaaaagaaatttgaagctttgaagaaaataagaagcactgatgaagagtttgatgaaacagaggagaaagagagttttttcttagttgaaga  29401000                                                            --------->ANAC46                                                            --------->ANAC58                                                            --------->ANAC58                                                --------------->AtSPL8                                                <---------------AtSPL8                                               <---------ZAT18             --------->ATHB12                                               --------->ZAT14        <---------DAG2                   <---------AHL20(2)          <---------ZAT14      ------>MYB83                   --------->AHL20(2)         --------->ALFIN1      ------>MYB46(1)               ---          --------->ANAC55(2)             <---------At5g28300    --------->MYB46(3)    <----------DOF2 -------->DOF2     <-----------TBP---------->DOF2     <----------DOF2 <----------DOF2 <---------DAG2   tgaaagttgtttatgtattatttatataagtctaagaaaagagttacagtggagtactttccaagaaaccaactttttgatttgtctgccttttgctata  29401100                                                    --------->AHL20(2)                                         ------>ZmHOX2a(2)          --------->TOE2(3)                                        <------ZmHOX2a(2)          ----------->GT1                                       <---------AGP1             <-------TEIL             ----------     --------->ARR11(3)                --------->ARR11(3)       <---------ARR14(2)       <---------At4g35610     <---------ARR11(3)                <---------ARR11(3)      <---------DEAR3(2)        --------->At4g35610     --------->GLK1(2)                 --------->AGP1<---------AHL20(2)              --------->MYB52(2)     <-----------ARR10                <---------CCA1(2)       ----------->ARR10    <---------MYB52(1) ------>ZAT6<----------DOF2          ----------->ARR10     <---------ANAC46      ------>ZmHOX2a(1)   acacaaaaatcttacttttgttttctaaaatccaaaaattagatcttaatttgatttaatggggtcgattcgttaaaacattcctgttatttgctgaccc  29401200                                                                                                -----                                                                                                -----                                      --------->AHL20(1)                                       ------                                      --------->ARR11(3)                                     <-------                   <---------YAB1     <---------AHL20(1)                                     <-------      <---------WOX13(1)        --------->ANAC58  <---------YAB1                 <-----------RAV1(1)     <---------ANAC58           --------->ANAC58 <---------ARR11(3)             <---------YAB1 <-----     <---------ANAC58        <----------ID1      --------->AHL20(1)          <---------YAB1  --------    --------->ATHB12       ---------->DOF2       <---------AHL20(1)        --------->ZAT6   <--------  <---------MYB52(1)  <---------WOX13(1)         --------->ARR11(3)  ----------->GT1        --------- ->HVH21           --------->ICU4     <---------ARR11(3)        <---------ZAT6 <XXXXXXXXXXXXXXXXXXXXMIR834   tatcgttgattgtttattgtcttaattgataaagacgaaatatttttcaaatatttttggagcctagtgaaagattaatactattgttgttgttatcatt  29401300                      <---------AHL20(2)                      <---------ICU4                      --------->AHL20(2)                     --------->ICU4   --------->ETT(2)  <---------YAB1 <-----------GT1   <---------ICU4 ---->AHL20(2)    <---------ATHB51 ---->ATHB51      --------->ICU4 --->ICU4         --------->AHL20(2)                                                                - --ICU4           <---------AHL20(2)                                <---------ZAT18                 < -HAHB4      --------->LBD16                                        --------->ZAT18                <- ----YAB1   --------->ANAC46                            <------ZmHOX2a(1)                          -- ->YAB1     --------->ANAC55(2)                     <-------TEIL ---------->DOF2       <---------MYB52(1) -YAB1      <---------ANAC55(2)                 >>>>>>>>>MYB98--------->YAB1          <----------DOF2 >ICU4     <---------LBD16  ---------->DOF2   <-----------GT1<---------YAB1          --------->TOE2(3)   atttatcgacatttacggaaataattaatacaaagatagcgaaactttttaacatacaggactatcatagagcacaaaaactcaaaacctttagttagac  29401400                                                                             <---------AHL20(2)            --------->ZAT18                                                  --------->AHL20(2)         <---------ANAC58                                                 <--------HAHB4         <---------ANAC46                          <---------YAB1         --------->YAB1         <---------ANAC58                  --------->ANAC58        --------->ZAT14           <-------       --------->CCA1(2)        <---------------AGL15              <---------ZAT18          <--------P  <---------YAB1                --------------->AGL15     --------->MYB111(1)--------->YAB1<-------GAMYB -------->YAB1                 --------->YAB1   --------->GLK1(2)  --------->ZAT18   <----------DOF2 ---------ICU4      --------->ANAC58  <---------TOE2(3)   <---------MYB46(3)<---------YAB1<---------MYB46(3) --------ATHB51     --------->ANAC58 ---------->DOF2 <---------MYB52(1)  <---------YAB1  <---------TOE2(3) ------->ICU4--------->ZAT6   <-------TEIL --------->ANAC58        <---------ZAT14<-----------GT1   <   aattatgagttacgagcactactagcaattgattcatattaaagtaagcaattctgttagtagttgctgtgcactataattatataactttgtggttgtt  29401500  Previous    Next  AGI:  At1g78120.1    Description:  tetratricopeptide repeat (TPR)-containing protein. similar to tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] (TAIR:AT5G65160.1); similar to unknown [Populus trichocarpa] (GB:ABK95822.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide TPR2 (InterPro:IPR013105); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 29398832    to: 29400979    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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