Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------DAG2                                               --------------->AGL15                                               <----------DOF2                                   >>>>>>>>>>WRKY26                                   <---------WRKY18(1)                                   >>>>>>>>>>WRKY43              --------->AHL20(2)                                --------->ANAC55(2)   ----------->GT1                                <---------ANAC58      --------->ANAC55(2)          <---------AHL20(2)                                <---------ANAC58      <---------ANAC55(2)          --------->AHL20(2)                                <---------ANAC55(2)   <------MYB46(1)          <---------YAB1                               --------->MYB52(2)     <------MYB83            --------->AHL20(1)                             <---------MYB52(1)<---------------AGL15          <---------AHL20(1)                            <-------GAMYB     <-----------------AGL3          <---------AHL20(2)                           <---------MYB46(3) <-----------------AG<---------AHL20(2)     <---------AHL20(2)                           ----------->GT1    <-----------------AGL1         --------->YAB1                 <---------TOE2(3) >>>>>>>>>>WRKY38  --------->MYB59         --------->AHL20(2)     <----------DOF2   --------->MYB59      <-----------GT1--------->ZAT6   <---------YAB1 <---------   cttgatacttttgagttttaagttttaggtcgttacttgaccaaaatcactttattaggtaacaccatttaatctcttattatatttatattatatcgat  29392300                     --------->ATHB51                                ---------->DOF2                     <---------AHL20(2)                             <---------AHL20(2)                     --------->AHL20(2)                     ----------->GT1                     <---------ICU4                        --------->DAG2 --GT1 <---------MYB52(1)         --------->AHL20(2)      ---------->DOF2   <---------AtMYB61   tcactatcagttattagattgaattatttcaaacaaatatttatgttcacaaaattttcaaaaagtttatttaaagctatggtctgtgtccatccaattc  29392400                          <---------MYB52(1)                         <-----------HVH21                         <---------SPL7                     <-----------GT1                    <-----------GT1                 <--------HAHB4                 -------->ATHB1                 --------->AHL20(2)                            ---------->DOF2                      -                 <---------ICU4                                <---------DOF5.7(2)                ---                 <---------AHL20(2)                          --------->DOF5.7(2)                  <--                 --------->ATHB51                           --------->TOE1(3)                     <--                <---------ATHB51                     --------->AHL20(2)                          ----                <---------ATHB12                    --------->YAB1   <---------ZAT2             <----                --------->ICU4                 --------->AHL20(2)    --------->ZAT2             -----              --------->WOX13(1)            --------->ATHB12--------->TOE2(3)                 <------             --------->AHL20(2)            --------->ICU4  <---------ANAC55(2) <---------MYB52(1)<---            <---------ATHB12        ------->TEIL    --------->AHL20(2)        <-------GAMYB  <-------         --------->AHL20(2)   <---------MYB52(1)<---------AHL20(2)   --------->At4g35610<------ZmHOX2a(1)         <---------AHL20(2)--------->SPL7  <---------YAB1 <-------TEIL<---------ANAC46<---------TOE2(3)   attttttgtatttaatcaattatttcccgtccggtatggaccgtgatgatttaataaaaatacgttaaagcagcttggaccgttgattaaggacgatgtc  29392500  <---------ARR14(2)  --------->ARR14(2)                           <---------MYB55(2)                                   - -------->LBD16                                --------->MYB46(3)                                   - ------>ATERF1(1)                         <---------YAB1                                        ----- ----NtERF2                             --------->YAB1                                          <---- -------LBD16                           <---------ICU4                                         ------ -->NtERF2                             --------->ICU4                                      --------->AHL20(2) -----DEAR3(1)                       --------->YAB1                      <---------RAP2.6(3)<-------- ---->ETT(2)                         <---------ICU4                     --------->RAP2.6(2)<---------AHL20(2) -----HVH21                         --------->AHL20(2)                 --------------->AtSPL3 <------ ------RAP2.3(1)                    <---------AHL20(2)             ---------->DOF2    <----------DOF2 ----RAV1(1)                    ------>ZmHOX2a(1)  --------->AtMYB61--------->DAG2    ---------------   gccggatagagagcatcacaatcgttgatgtctccttattaattatcaaaccaccaatacaatattcgaaaaagccgtacttaatgttctttatttatta  29392600                <------NtERF2     <---------YAB1   --------->YAB1    <---------ICU4  <---------YAB1------------>CBF <---------ARR11(3)  --------->YAB1 --------->ARR11(3) <---------ATHB12                                                                < -------->CCA1(1)   <---------ATHB51      <---------YAB1                                            < -------->RVE1(1)   --------->ICU4    <---------MYB52(1)                                            - ---->AHL20(2) ------>NtERF2          <-------GAMYB                                               --- -----AHL20(2)--------->ATERF1(2)    --------->LBD16                           ----------->GT1  <---- --->YAB1     <---------ATERF1(2)    ----------->GT1                      ---------->DOF2       ----- -AHL20(2)   --------->RAP2.6(3)    <---------ANAC46                ------>ZmHOX2a(1)          <----- ---YAB1    --------->MYB52(1)    --------->MYB52(1)    <---------CCA1(2)<---------AHL20(2)    <----- >AGL15   --------->DEAR3(2) ------>ZmHOX2a(1) <---------GLK1(1)   --------->TOE2(3)    *TSS   ------   aaatatcattataccgacggcaattatggtcctacatgccggttattagaaatctctcgtttctcgtttccttatttaaagtcgcaaaaactctctctac  29392700      --------->MYB52(1) ---------At4g35610 ---------ZAT2                                                      ----------->GT1 -------->At4g35610                                               --------->DAG2 ------>ANAC46                                           <---------HSFB2a(1) -----ALFIN1                                             --------->HSFB2a(1) ---->ANAC46                                        --------->HSFB2a(2)                        ------ ----REM1(2)                                        <---------HSFB2a(2)     ----------->GT1    ------ ----ZAT14              ---------->DOF2        <---------ICU4   ---------->DOF2       ---------->DOF2 --->ZAT14 ---------->DOF2           --------->GLK1(1)--------->LBD16      --------->MYB59   --------   acagctcataacagaaagaagaaacacaaagtgagacagaactctctaattagtcccgaaggtttcaaaagggtattttggtaaaatcgaaagagaatca  29392800                                                                   --------->TOE1(3)                                                                   --------->TOE2(3)                                                          --------->TGA2(1)                                                          >>>>>>>>>>HY5                                                          <---------TGA2(1)                                                          <---------ANAC46                                                          <---------O2                                                          --------->O2                                                          <---------ANAC55(2)                               <---------WRKY38(1)        ----------->GT1                               <---------WRKY12           <---------bZIP60(2)                         ------>ZmHOX2a(1)                <---------TGA1a                       ------>ZmHOX2a(2)                  <---------bZIP60(1)                      <------ZmHOX2a(2)                   --------->TGA1a                      --------->GLK1(2)                   --------->bZIP60(1)                     <---------ARR11(3)                  ----------->STF1                     --------->ARR14(2)                 <---------TGA2(2)                     <---------GLK1(2)                 ----------->TGA1                     --------->ARR14(3)                ----------->HVH21                     --------->ARR11(3)               <-----------HVH21                     <---------ARR14(3)              ----------------------->TaNAC69(2)<---------MYB52(1)                     <---------ARR14(2)              <------MYB83 ----------->GT1    <---------ANAC58                  <---------HSFB2a(2)                <------MYB46(1)                 <---------ANAC46    <----------DOF2  --------->AGP1                  <---------DEAR3(2)              <---------ANAC58 --->ATHB12       --------->HSFB2a(2)               <---------MYB46(3)           <---------SPL7 --->YAB1      <---------ARR14(2)                   <---------DEAR3(1)          <---------ANAC58 ->GLK1(2)     --------->GLK1(2)                    <---------DREB2C(2)         <---------ANAC58   tggacgcttttgatgcgattccagatcctgtggtcatcgacattttgaacagagtcggtgacgtcaaaacgttaatacgatgtcgttccgtttctaaacg  29392900                                                                  --------->ARR14(2)                                                                  <---------ARR11(1)                                                                  --------->GLK1(2)                                                                  <---------ARR14(2)                                                              --------->ANAC58                                                              <------NtERF2                                                             --------->MYB52(1)                                                            --------->DEAR3(1)                                                           <---------ABI4(2)                                                           --------->MYB46(3)                                                           --------->ATERF1(1)                                                          ------>NtERF2                                                          <---------ATERF1(1)                                                         --------->PCF2                                                     ==================================HOX2a_HOX2a                                                     ------>ZmHOX2a(1)                                                     <---------LBD16                                                    --------->TOE1(2)                                                   ------>ZmHOX2a(2)                                                  <------ZmHOX2a(2)                                                 <---------ARR11(3)                                                 <---------ARR14(2)                                                 --------->AGP1   <-----------ARR10                                                 --------->ARR14(2)--------->At4g35610                                                 --------->ARR11(3)<---------At4g35610                                               ----------->ARR10 <---------ARR14(1)                                             <------ZmHOX2a(2)--------->ANAC58            ===========                                             ===============HOX2a_HOX2a                   ------>ZmHOX2a(1)                                            <-----------HVH21------>NtERF2                ===========                                   --------->HSFB2a(2)--------->TOE1(1)         <------ZmHOX2a(2)                                ====================HOX2a_HOX2a  <---------GLK1(2) <---------GLK1(2)                                =========================HOX2a_HOX2a        --------->LBD16               <---------ATHB12 ==========================HOX2a_HOX2a       --------->HSFB2a(2)    <-       <---------MYB52(1)       ------>ZmHOX2a(1)<---------GLK1(2)------->TEIL  =================HOX2a_HOX2a   attcaactcgttagccactcagtctgagtcgctccttctccaactcgatcagatcctcggagccaccgaatctgactccgagatcgattctcctatcgct  29393000                                                                                        ------>ZmHOX2a(2)                                                                                       <---------GLK1(1)                                                                          <---------GLK1(1)                                                                       --------->ANAC58<------ZmHOX2a(2)                                             --------->ARR14(2)     ----------->TGA1  --------->ARR14(2)          ==================================HOX2a_HOX2a             ----------->HVH21 <---------ARR14(2)          ------>ZmHOX2a(2)                 <---------CCA1(2)    --------->ZAT6  -------->P         ===================================HOX2a_HOX2a     <---------At4g35610===============HOX2a_HOX2a         <------ZmHOX2a(2)                  ------>ZmHOX2a(1)<---------MYB52(2)------>ZmHOX2a(1)   <- ===============HOX2a_HOX2a              ------>ZmHOX2a(1)  --------->At4g35610================HOX2a_HOX2a ================HOX2a_HOX2a         ------>ZmHOX2a(1)      --------->ZAT2--------->GLK1(1) --------- --------GLK1(2)            <---------At5g28300        --------->ANAC46--------->ANAC58--------->GLK1(1)   agcttcttccgatctctcttcaaatccattcacggtctccttcctcctatcttctccaaaccagctaactctgacgaaatcctaacccgatctccgaaaa  29393100                                                                                          <---------MYB52(1)                                                                                         <-------GAMYB                                                                                       <------NtERF2                                                                                       --------->RAP2.3(1)                                                                                      --------->ABI4(1)                                                                                      ------>NtERF2                                                                                     --------->RAP2.3(2)                                                                                     --------->RRTF1(2)                                                                                     --------->RAP2.3(3)                                                                                     --------->RRTF1(3)                                                                                     <---------DEAR3(1)                                                                                     --------->DEAR3(1)                                                                                    <---------ABI4(2)                                                                                    --------->ORA47(2)                                                                                    <------NtERF2                                                                                    --------->ATERF1(1)                                                                                    --------->DEAR3(2)                                                                                    --------->RAP2.6(1)                                                                                    --------->RRTF1(1)                                    <---------ARR14(2)                              --------->DEAR4(2)                                    --------->ARR14(2)                              --------->ERF1                                    --------->GLK1(2)                               --------->RAP2.3(1)                                   <---------GLK1(2)                               <---------ORA47(2)                                   <---------ARR14(2)                              <---------ERF1                                   --------->ARR14(2)                              <---------RRTF1(1)                                 --------->LBD16                                   ------>NtERF2                                --------->HSFB2a(2)                                <---------RAP2.6(1)                                <---------ANAC55(2)                                <---------DEAR4(2)                   --------->ARR14(2)        --------->ALFIN1                     <---------RAP2.3(3)         --------->GLK1(2)      --------->ANAC55(2)                               <---------RAP2.3(2)        --------->ARR14(2)     ------>ZmHOX2a(2)                <---------bZIP60(1)<---------ATERF1(1)        <---------GLK1(2)      <---------LBD16                  --------->bZIP60(1)<---------RAP2.3(1)      ----------->ARR10      --------->ARR14(2)           --------->ALFIN1        --------->DEAR3(1) ------>NtERF2     <---------ARR14(2)     <---------AtMYB61<---------MYB46(3)     <---------DEAR3(1) --------->LBD16 --------->LBD16<---------HSFB2a(2)       <---------DEAR3(1)     <---------ABI4(2) --------LBD16 <---------LBD16<------ZmHOX2a(2)           <---------AtMYB61    --------->DAG2 >LBD16 <---------ARR14(2)   <---------ARR14(2)    --------->YAB1            ---------->DOF2 <-------   ctccggctcagattctctccggatttgaacggatccggaatctggaggtggaattatacggtggtgatgtcaagcttgagaaaggcgccgccgttaagtg  29393200  Previous    Next  AGI:  At1g78100.1    Description:  F-box family protein. Identical to F-box protein At1g78100 [Arabidopsis Thaliana] (GB:Q9C9S2); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G22220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61736.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 29392688    to: 29394005    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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