Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->WOX13(1)                       --------->AHL20(2)                       <---------AHL20(2)                      --------->AHL20(2)                   --------->AHL20(2)                   --------->AHL20(1)                   <---------AHL20(2)                   <---------AHL20(1)                                                       ---------                  --------->AHL20(2)                                                   --------->MYB46(3)                  <---------AHL20(2)                                                 --------->ARR14(2)               <---------AHL20(2)                                     ------->TEIL--------->ANAC46              <---------AHL20(2)                                   <---------MYB52(2)<---------ARR14(2)              --------->AHL20(2)                                 --------->MYB52(1)--------->LBD16         <---------GLK1(2)               --------->MYB52(1) ---------->DOF2       <---------ANAC55(2) --->HVH21   <---------YAB1      --------->ANAC46       ---------->DOF2          <---------LBD16 <---   agtttaagacagattattaaataaattaatcaaacacgagaaaaaacagagtgagagtgaaagaaagaaacgaacttgagcaatgcggaaccattcatag  29357400                                                                                    <------NtERF2                                                                                    --------->ATERF1(1)                                                                            <---------WRKY18(1)                                                                      --------->GLK1(1)                                                                     --------->ARR14(2)                                                                     <---------GLK1(2)         ------                                                            <---------MYB52(1)     <---------SPL7                                                           <-------GAMYB----------->RAV1(2) ------>NtERF2                                                           --------->LBD16------>ZmHOX2a(1)--------->ANAC58                                             --------->At4g35610     <---------ARR14(2)    --------->ANAC58                         <---------ANAC58 --------->At4g35610      --------->LBD16<---------ANAC58                         <---------ANAC58 <---------At4g35610  <-----------GT1    <---------ANAC46                   --------->ICU4       <--------P        ----------->GT1 --------->HSFB2a(2) <------                --------->WRKY18(1)<---------At4g35610    <---------ANAC46--------->LBD16  --------->ANAC46            <---------At4g35610    <---------ZAT2      <---------MYB52(1)<---------LBD16  --------->SPL7            --------->At4g35610 ---------->DOF2    <---------At5g28300<---------GLK1(1)  <---------ATERF1(1) >YAB1   <---------At4g35610   <------ZmHOX2a(1)  <-----------GT1<---------LBD16  <---------ANAC58 -- ---ZmHOX2a(1) <--------ZAP1 <---------TOE2(3) <----------DOF2---------->DOF2 --------->DEAR3(2) ----   gagtcgaatgaagcagcggtcaagatgacttgaggaaagctggtagcagctttaaccgttccgttaaaccggattcctggaccggcgtaggctacgccgt  29357500                                                                           <------ZmHOX2a(2)                                                                          --------->ARR14(3)                             <---------GLK1(1)                            <---------ARR14(2)                             --------->GLK1(1)                            --------->ARR14(2)                            <---------ARR14(2)                            <---------ARR11(3)                           <------NtERF2                                  --------->ARR11(3)                          --------->LBD16                                 --------->AGP1                      --------->ANAC58                            ----------->RAV1(2)                      --------->ANAC58                            <---------ZAT2                      --------->ANAC46               --------->At4g35610  <-----------ARR10       ----------->HVH21 --------->RAP2.6(2)    <---------LBD16   <---------At4g35610     --------->At4g35610<---------LBD16     --------->ARR14(2)    --------->At4g35610 --->LBD16           --------->SPL7         <---------ARR14(2)  --------->MYB46(3)     <---------TOE1(3) ---ANAC46--------->MYB46(3)--------->ARR14(2) ----------->RAV1(2)--------->ZAT2       <---------TOE2(3) -------->DOF2     <---------SPL7      <---------LBD16       <-----------GT1------>ZmHOX2a(2)     --- ----->REM1(2)--------->AtMYB61    --------->ANAC46  <---------At4g35610  <---------ARR14(3)      <--   gtaaagcttctgaccaccattcgtacgccggaactccaagacgcggtatccctggagctgtattcaccagctgcgagatcttctcgtctatggttagcct  29357600                                                                                                    -                                                                                                    <                                                                                                  <--                                                                                                -----                                                                                               ------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                            <--------                                                                                            ------>NtERF2                                                                                            <------NtERF2                                                                                            ---------                                                                                            <--------                                                                                           <---------RAP2.3(1)                                                                                           <---------ANAC46                                              --------->ARR14(2)                           <---------ATERF1(1)                                          <------NtERF2                                   <---------RRTF1(3)          --------->ANAC58               ----------->RAV1(1)                              <---------RAP2.6(2)          --------->ANAC58              <---------RAP2.6(2)        <------MYB46(1)        <---------RRTF1(2)          <---------ANAC55(2)          --------->ZAT14             <------MYB83           <---------DEAR3(1)          --------->ANAC55(2)          <---------ZAT18           <--------P               <---------RAP2.3(2)       <------ZmHOX2a(2)               --------->SPL7          --------->MYB55(2)        <---------ZAT14      <-----------HVH21          <-----------HVH21          <---------ANAC58             --------->ZAT18      --------->ARR11(3)        <------MYB83  <---------ARR14(2)<-------GAMYB           --------->ALFIN1      <---------ARR11(3)        <------MYB46(1)     <--------P <---------MYB46(3)    <------ZmHOX2a(1) ------>HSFB2a(2) <---------ANAC58     --------->RAP2.6(3)  <---------ANAC46      <-----------RAV1(2) -------HSFB2a(2) <---------ANAC58    --------->ALFIN1      <---------ANAC58  <-----------HVH21<-----   cgagacgagatcacgcgctcgcttgccaattgggaggtcagtgcggcagaactggtagagtttcgtggttggatttgaagggtcacaggagtgcggcgga  29357700 -------->At4g35610 ---------At4g35610 ----ZmHOX2a(1) ---->ALFIN1      <---------------------WRI1 --->ATERF1(1)  --------->WRKY12                                           ---------->DOF2 --ANAC46      --------->ALFIN1                                         --------->LBD16 --DEAR3(1)   --------->LBD16                                         <---------LBD16          <----- ->ALFIN1    --------->DEAR3(1)                                 ----------------->AGL1       -------- -LBD16   --------->ANAC46                                   <---------ANAC58                <------- >ATERF1(1)  <---------ANAC46                  <---------MYB52(1)  ---------->DOF2     --------->DAG2 -At4g35610------->GAMYB              >>>>>>>>>TBF1          <---------ANAC58         ---------->DOF2 -NtERF2  --------->DEAR3(1)    <------ZmHOX2a(1)            <---------ANAC46   --------->CCA1(2)<---   ggagctgattcaacgccgtggacgatgaagagaaggagaagaagaagcagttgtttagccatggcttcgaaatgcggaaaagagatgagaaagtgatgag  29357800                                                       --------->AHL20(2)                                                    --------->YAB1                                             <---------YAB1                                           <---------ICU4                                           --------->YAB1<------------CBF                                          <---------ATHB51           <-----------GT1 ----ANAC46                           --------->LBD16  <---------AHL20(1) ->ICU4           *TSS                ------------>CBF <---------AHL20(2)                     ------- --YAB1----------->HVH21   <---------YAB1 <---------ATHB12      --------->AHL20(2)            <------ ------ZAT6  <---------GLK1(2) --------------->AtSPL8  --------->AHL20(1)                     -------   tgtaagagagtgacagagtctctgttcttcttattcgttccccaattatgtctgtaataaattgacttaaataaccttcttgattcaacagggtaaccta  29357900       <---------AHL20(2)       <---------AHL20(1)       --------->AHL20(1)                                    <---------AHL20(2)      --------->AHL20(2)                                     --------->AHL20(1)      --------->YAB1                                <---------ARR11(3)     <---------YAB1                                 --------->ARR11(3)  --------->AHL20(1)                        --------->AHL20(2)  <---------AHL20(2)                        <---------AHL20(2)  --------->AHL20(2)                       --------->ICU4<---------AHL20(2)  <---------AHL20(1)                       <---------ATHB12  --------->AHL20(2) -->TOE2(3)                              <---------------AGL15                                 ------ ---MYB59<------------CBF     <----------DOF2--------->MYB52(1)                        --------->YAB1 -->TOE1(3)             <---------ATHB12 --------------->AGL15  <---------AHL20(2)  --------->YAB1 <-   aaaatttattatattgttgtttttcaataactctttttttttgcaattaatggacatcttaaattttttattcaatagttgaataagtataatgaagttg  29358000                                                       <---------AHL20(2)                                                     <---------YAB1                                                   <--------HAHB4                            --------                                                   <---------ICU4             ====================HOX2a_HOX2a                                                  <---------YAB1              ------>ZmHOX2a(1)                                                  --------->ICU4     <-----------GT1       <------ZmHOX2a(2)                                               <---------YAB1   <---------RVE1(1)         --------->ARR11(3) ----->GT1 <---------ANAC46       <---------YAB1--------->YAB1 <---------GLK1(2)<---------CCA1(2) --------AHL20(2)           <----------DOF2   <-----------GT1  --------->ARR11(3)<---------ARR11(3)   ttaaattttggtgttgtgaagtttttgtgtctttttctgatttgctattttcattattattttcagatttttatctaatcctatatccttgagatcaatt  29358100                                                                            <---------AHL20(2)                                                                    <------MYB46(1)                                                                    <------MYB83   --------->HSFB2a(2)                  <---------ICU4 --------->AHL20(2)   --------->AHL20(2)   <---------HSFB2a(2)----------->GT1  <---------YAB1  <---------AHL20(2) <----------DOF2 ->WOX13(1)        ------------>MYB.PH3(1)      <-----------GT1  --------->CCA1(2)   agtttatagaaaatgttttaaaaacagttatatcaaaactcatcattttttaactatataaatagagatttggttcctttaatttggacacatagaaaat  29358200                                                                                 --------->AHL20(2) -                                                                     <---------AHL20(2)             <                                    --------->DAG2                   --------->AHL20(2)             <                            --------->AHL20(2)                      <---------AHL20(2)        -------                        <---------AHL20(2)                      --------->AHL20(2)       --------->AHL20(2)                        --------->AHL20(1)          <<<<<<<<<GATA-1 <---------AHL20(1)   <---------AHL20(2)                        --------->AHL20(2) <---------AHL20(2)   <---------AHL20(2)<-----------GT1  <-                 --------->TOE2(3) ---------->DOF2 <-----------GT1  --------->AHL20(2)  --------->AHL20(2)   cgtattagattgcatattatctcaaataaaataaacaaaaagtatttgatttttatctatttctgtttaatttaatttgctaataaactatttaattctt  29358300  Previous    Next  AGI:  At1g78060.1    Description:  glycosyl hydrolase family 3 protein. similar to BXL1 (BETA-XYLOSIDASE 1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G49360.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT5G10560.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT3G19620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61741.1); similar to beta-D-xylosidase [Hordeum vulgare] (GB:AAK38482.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61742.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (InterPro:IPR002772); contains InterPro Range:  from: 29354573    to: 29357818    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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