Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <---------TOE2(3)                                                                        <---------AHL20(2)                                                                       --------->AHL20(2)           <                                    --------->LBD16                 <---------AHL20(2)              <                                   <---------ANAC46                 --------->AHL20(2)              <                               <----------DOF2                     --------->AHL20(2)               -                              <---------DAG2                    --------->YAB1------->TEIL          -                           <-----------GT1                      --------->TOE2(3)                 <--                      <---------AHL20(2)                 ---------->DOF2--------->AHL20(2)        --- ------GT1            --------->AHL20(2)   ---------->DOF2      --------->TOE1(3)          --------->KAN4(1)   ctaatattccaagtttttgtttgttttattaacctttccgtctataaaagaattaagagaaaagaaccataaaattaatgaatctacttagcaatattct  29343200                 --------->YAB1            --------->AHL20(2)            <---------AHL20(2)          <----------DOF2    --------->At4g35610 --------->ARR14(1) --------->CCA1(2) ---------GLK1(2)<---------ICU4                            <---------AHL20(2) ---------ARR11(3)                                     <---------AHL20(2) ---------ARR14(2)                            --------->TOE2(3) -------->ARR14(2)                          --------->GLK1(2) -------->ARR11(3)       ---------->DOF2   <---------GLK1(2)             >>>>>>>>>CBP60g -------TOE2(3) <---------AHL20(2)       ----------->ARR10 --------->AHL20(2)     <---------GLK1(2) -------->ARR10 <---------ATHB51   --------->AHL20(2)  --------->AHL20(2)>>>>>>>>>SARD1   aagatttgctgtctttaaataatgaaacaaagcttaagaaaataagattcttaatatttaaaaaaatactatgaaatttggacagaattgctgagttttc  29343300                                      <---------ANAC58                                      <---------ANAC58                                 --------->TOE2(3)                                <--------HAHB4                                                   ----                                --------->YAB1                                                   ----                                --------->ATHB12                                                 <---            --------->ANAC46   <---------YAB1------->TEIL                                        ----   <---------------AtSPL8     ------->TEIL--------->ANAC55(2)                          --------->ANAC58   --------------->AtSPL3  <---------ANAC55(2)                                   <---------YAB1 <----   --------------->AtSPL8  --------->ANAC55(2)    <-----------GT1<------ZmHOX2a(1)     --------->ANAC58   ttatttatgtacaaacaccactaagtaatatgtatcattagcttatgtatttttaccaagtttgagaggaccatacaactaatattatcacgaattctat  29343400                                                                      <---------ANAC55(2)                                                                      <---------ANAC46                                                                      <---------ANAC58                                                                      ===============================                                                                      <---------bZIP60(2)                                                                      --------->ANAC55(2)                                                                      --------->O2                                                                      <---------bZIP60(1)                                                                      --------->bZIP60(1)                                                                      --------->TGA1a                                                                      <---------TGA1a                                                                    <---------TGA2(2)                                                                   ----------->TGA1                                                                 --------->YAB1                                                               --------->GLK1(2) ----->ATHB12                                      <---------AHL20(2) <---------O2 ----------->TGA1 ---->ATHB1                               <----------DOF2     --------->YAB1     --------->YAB1 ------ICU4                  --------->AtLEC2      --------->AHL20(2) <---------ANAC58<---------YAB1 ----->ATHB51       --------->YAB1        ======================================bZIP_DOF -----YAB1---------->DOF2 <---------AHL20(2)   --------->AHL20(2)<---------ICU4  <---------ICU4   <--   tattgcatattgcaaagtacaaacagaattaatgcaaaaatgttctttttaaaataaatgtcaagaatcatgacgtggcataatcgtgacgataacataa  29343500                                                      <---------ARR11(3)               *TSS                         <------------CBF <---------TOE2(3)                           <---------ALFIN1            --------->ANAC46              <---------YAB1                       <---------ALFIN1 ========bZIP_DOF ------->GAMYB           <---------TOE1(3)                   ------>ZmHOX2a(1) --------DOF2  --------->MYB52(1) ------>ZmHOX2a(1)<----------DOF2        ------>ZmHOX2a(1)       <--   ctttgatcagaaatactcaacggtctagattgagtcctgagtttatggttcttctttatcttccatgtctcttctccttcctcactcccctcttccctct  29343600                             --------->At4g35610                             --------->GLK1(1)                         --------->HSFB2a(2)                 --------->ANAC46              --------->ARR14(1)                           --------->ANAC58                       <--              --------->CCA1(2)                            --------->ANAC58                     -----             --------->ARR11(3)                            --------->ANAC46             ---------->DOF2             --------->ARR11(1)                         <---------REM1(2)          <---------AtLEC2             --------->ARR14(2)                         --------->ZAT14            <---------ANAC58             <---------ARR11(3)                         <---------ZAT14            <---------ANAC46             <---------ARR14(2)     <<<<<<<<<CBP60g   --------->ANAC46             <---------ANAC58-- --------DOF2<---------GLK1(2)      <<<<<<<<<SARD1  --------->ZAT6            <-----------RAV1(1) ---   ctttatctctctcaagatttgctctgtccagagctccaaatttcaagaacataaacactacacacaaaacactgaatacgatgttgcttggaaagagaca  29343700                                                                                            ---------               <---------ARR14(2)                                                           <--------          ----------->RAV1(1)                                                              ------>MYB46(1)        <------ZmHOX2a(2)                                                                  ------>MYB83     --------->DEAR3(1)                                                                    -------->P  <---------ALFIN1                                                                        --------->MYB52(1)  --------->AtMYB61                                                                   --------->ANAC58 --------->MYB46(3)                                                                   --------->ANAC58 -------MYB52(2)                                               <-----------HVH21   ------->GAMYB  <-- ---->MYB52(1) --------->ARR14(2)                     ------>MYB46(1)           --------->MYB52(1)<-- ----->GAMYB ------->GAMYB           --------->DAG2   ------>MYB83              ----------->RAV1(1) ------>MYB46(3) --------->MYB46(3) ---------->DOF2 --------->AtMYB61         <---------ATHB12 <-----   acgaccaccgatcaacagaaccacaagtctatcggagataaagttcgatctaaaccttcccagcgagtcagagccatcaaatcaacagaagccaaccgtt  29343800           <---------ARR14(2)       --------->SPL7---------->DOF2       --------->SPL1(2)      --------->SPL1(1)      <---------SPL1(1)     <---------SPL7 --------->WRKY18(1)  --------->WRKY12     <---------SPL1(2)                   --------->WRKY38(1)   <---------------AtSPL3        <---------At4g35610   --------------->AtSPL3        --------->At4g35610  <------------------SPL14  ----------->HVH21 ------------------>SPL14  --------->At5g28300                       --------->MYB46(3) >MYB46(3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                     --------->MYB52(1) ----AtMYB77       <-----------HVH21    <---------MYB52(1)        <---------WRKY12               <XXX -------ANAC58    ------->GAMYB ------->GAMYB          <---------DEAR3(2)                       <XXXX -------ANAC58   --------->MYB46(3)   <---------MYB46(3)         <------ZmHOX2a(2)      <---------ALFIN1 ----MYB52(1)  --------->MYB52(1)--------->ZAT2      <---------MYB52(1)             <-----------HVH21   gcgagcccgtacggttccaacggtcaagctgtaacagcagccgttgatcaaaaccgtgggttcttagatcaacggctcttatccatggtcacaccgagag  29343900                                                        --------->ZAT18                                                        <---------ZAT18                                                       <---------ANAC58                                                       <---------ANAC58                    --------->REM1(1)                                                   ------>ZmHOX2a(2)                     ------>NtERF2                                                  <------ZmHOX2a(2)                      ----------->RAV1(1)                                                 <---------ARR14(2)                     ----------->HVH21                                                 --------->ARR14(2)                    ------>NtERF2                                                 --------->AGP1                        <------NtERF2                                                 <---------ARR14(3)                    --------->LBD16               <-----------RAV1(2)         <---------ANAC58                       ------>ZmHOX2a(1)       <------ZmHOX2a(1)     ------>NtERF2 <---------ANAC58 <----------DOF2      <---------ANAC58 ----------->RAV1(2)        --------->DEAR3(1)   <---------ARR11(3)              <---------ANAC58 XXXXXXXXXXXXXXXXXMIR398B/C ----------->HVH21    --------->ARR14(3) --------->ANAC58  --------->RAP2.6(2) XXXXXXXXXXXXXXXXMIR398A    --------->ANAC46     --------->ARR11(3) --------->ANAC58  <---------ATERF1(1)   gtaacctgaggagacactcaggcgatttctccgacgctggacatttcttgagatcttgcgcactttgtgaacgccttcttgttcctggccgcgacatcta  29344000                                                                                                  <--                                                        <---------MYB59                          ----                                                       --------->ANAC58                       -------                                                       <---------ANAC58                      <-------                                                       --------->ANAC58                      <-------                                                       --------->ANAC46                      --------                                                       <---------ANAC58                    --------->YAB1                                         --------->AHL20(2)                          <---------DAG2                                         <---------AHL20(2)            <---------YAB1<----------DOF2                                        <---------AHL20(2)      --------->YAB1    <---------ALFIN1---                                        --------->AHL20(2)   <----------DOF2     --------->MYB46(3)                <---------AHL20(2)----------->GT1      --------->ANAC55(1)      ------->TEIL<--------           <---------AHL20(2)  --------->YAB1          <---------ANAC55(2)--------->ICU4  <---------AHL20(2)          --------->AHL20(2)  <---------YAB1           --------->ANAC55(2)<---------YAB1 <---------AHL20(2)   tatgtataggtattatatataatcaagttttgatcatagtaaaaaaatttagaccttacgtaactttcatattttgatgatgaaccacttttttaatgat  29344100  Previous    Next  AGI:  At1g78020.1    Description:  senescence-associated protein-related. similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT1G22160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61750.1); contains InterPro domain Protein of unknown function DUF581 (InterPro:IPR007650) Range:  from: 29343587    to: 29344649    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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