Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <-----------GT1                             <-----------GT1                                --------->AHL20(2)                          --------->AHL20(1)                                <---------ARR11(3)                          <---------AHL20(2)                                <---------AHL20(2)                          --------->ARR11(3)                                <---------AHL20(1)                          --------->AHL20(2)                                --------->AHL20(1)                          <---------ARR11(3)                                --------->ARR11(3)                          <---------AHL20(1)    <--        <---------YAB1         --------->AHL20(2)                      --------->ICU4          ------  --------->AHL20(2)       --------->AHL20(2)                  --------->ARR14(2)    <---------MYB52(1) --------->YAB1          <<<<<<<<<MYB98                   <-----------GT1--------->AHL20(2)  -------- --------->AHL20(2)     ----------->GT1     <-----------GT1    <---------MYB52(1)    --------->ARR14(2)   taataaaaatatgaaaatagtctatatgttaaaatatattacagttataccattactatattacagttatgccattaatatattacagttatgccattaa  29318100                                                                                       <---------AHL20(1)                                                                                    <-----------GT1                                                                                 --------->YAB1                                                                             <---------AHL20(2) -------AHL20(1)                        <------ZmHOX2a(1)                    --------->AHL20(2)    -- --->AHL20(2)                         <---------TOE2(3) --------->YAB1      --------->AHL20(2)     <- ->ICU4  --------->YAB1    <----------DOF2----------->GT1                   <---------AHL20(2)    <--   tatacttattttcatatttgtttttcaaactttatattttgaggaagaaaaaaaacatttatagtttatacatattttttaaattataacatatttctaa  29318200                                                         <---------ICU4                                                       --------->ANAC55(2)                                                --------->AHL20(1)       <---------AHL20(2)                       --------->AHL20(2)      <---------AHL20(2)                        <---------AHL20(1)      --------->AHL20(2)                        <---------AHL20(2)     <---------AHL20(2)                        <---------AHL20(2)  <---------AHL20(1)    --------->AHL20(1)     --------->AHL20(2)  --------->AHL20(1)   --------->AHL20(2)  <---------AHL20(2) ------->AHL20(2)      --------->YAB1      --------->AHL20(2) --------AHL20(2)    --------->AHL20(2)   --------->AHL20(2)<-----------GT1 -------AHL20(2)  --------->AHL20(2)<-----------GT1  <---------AHL20(2)                   <-------TEIL   tttatatattaattttcagataaaataatattagtttttaactatttaattttatttaagtattacacatccaaaaatatgaaatagccaggctcatcaa  29318300                         --------->YAB1                         <---------ICU4                                               <--------------                        --------->ICU4                                               ----------------                      --------->YAB1                                                 <---------------            ----------->GT1 <---------ICU4                                           ================        <---------AHL20(2) <---------YAB1                                            ----------------      <<<<<<<<<MYB98--------->AHL20(2)               --------->ANAC46    --------->AHL20(2)     ----------->GT1--------->AHL20(1)             <-----------GT1      =============================    ----------->GT1 <---------AHL20(1)           <---------DAG2         <---------------AGL15       -   --------->AHL20(1)<---------AHL20(2)          <----------DOF2       --------->TOE2(3)     --------   acaaatatgttaaaatgaaaaatataatcatcatttaagacttaaactatactttacctcaccaaaaaaaaaaacttaaataggcagtccaaaaatggag  29318400     <-----------GT1  --------->YAB1 <---------AHL20(2) --------->AHL20(2) -AGL15 ->AGL1 --AGL2                                  <------MYB46(1)                      <---------ICU4 =======================MADS_MADS        <------MYB83                         --------->YAB1 ->AGL3                                 --------->MYB59                    --------->YAB1 ==MADS_MADS                            --------->MYB46(2)               --------->AHL20(2) -------->AHL20(2)                   --------->ATHB12       --------->TOE2(3)--------->ICU4      ---- --->GT1--------------->AGL15---------->DOF2    <-----------GT1  *TSS <----------DOF2     <---------ZAT6   aaattaataactaattttagtctttagacataaaagcattgtttggtatttcacaggtctaatctaaattttctttaaaataatgagatttagtgtgata  29318500                                <------------CBF                              <-------TEIL                           ----------->GT1                         <---------WOX13(1)                        <------------CBF                       -------->HAHB4                       <---------ICU4                       <--------ATHB1          --------->GLK1(2)<------MYB83              --------------->AGL15         <---------GLK1(1) <------MYB46(1)          ----------------->AGL1         --------->GLK1(1)<---------------AtSPL8    ----------------->AGL2      --------->ANAC58 --------->ATHB12       <---------GLK1(2)      --------->ANAC58<---------YAB1      <---------WOX13(1)    ---------->DOF2--------->ICU4        <------------CBF                                       -----   <------ZmHOX2a(1)  --------->ICU4    --------->ATHB12         <---------YAB1 <---------GLK1(1) <-- ----->CCA1(2)    --------->ARR11(3)   <---------YAB1<---------------AGL15----------->GT1 <----------   tatgaggaaagaaatctggagataatgattggtacattgttctgattggattctaccaaaataagtcatcactgaattgtgaaaatcccaaatgtcagag  29318600                                                                                      <---------AHL20(2)                                                                                     --------->AHL20(2)                                                                                  --------->YAB1                                                                         ------>ZmHOX2a(1)                   <---------ANAC46                                  <---------ARR14(2)      <----------DOF2                                                --------->ARR14(2)     ---------     <---------ANAC58                                               --------->GLK1(1)<---------AHL20(2)     <---------ANAC58                                               <---------CCA1(2)<---------AHL20(1) ---->GLK1(1)  --------->ARR11(3)          <----------DOF2        --------->YAB1--------->AHL20(2) --------DOF2  <---------ARR11(3)    ---------->DOF2       --------->ANAC46    --------->YAB1 -HVH21        <---------GLK1(2) --------->TOE2(3)         --------->REM1(1) --------->AHL20(2)   ctctattgctttctctagattttgtggatgtgtttcattaaaaggcttttgccaagtttctacatcactcatatcctcttaaaataataaaatttggaaa  29318700                                      <----------DOF2                                     <---------ANAC58                               --------->AHL20(1)                              --------->AHL20(2)               <------ZmHOX2a(1)     <---------ANAC58            <---------HSFB2a(2)<---------YAB1                                      <---------MYB52(1)      <---------DAG2          --------->YAB1--------->AtLEC2           <-----------GT1<---------TOE1(3)      <----------DOF2       --------->AHL20(2)             <---------MYB52(1)   ---------->ID1 -->GT1     --------->HSFB2a(2)<---------AHL20(2) --------->YAB1      ----------->HVH21            <-   taagaccactttttcgaggacaaatttgaaaataatattgctttcaatgcaaaaatcatccgtttcatcgttttgacggtttttcgttaagctataacag  29318800                                                                            <---------AHL20(1)                                              --------->ICU4                <---------AHL20(2)                              --------->ARR11(3)                            --------->AHL20(2)                              <---------ARR11(3)      --------->YAB1       --------->AHL20(2) ------TEIL                   --------->GLK1(2)  <---------YAB1      --------->ANAC46   attcaaattcaaactaccttcttcaagagcaaaatctattttgtagtcattgtgaataatacatttgatacacactattaaatttctgtgaatttgttta  29318900                                                                       --------->TGA2(2)        -----                                                                      <-----------HVH21        ------                                                                      <-----------TGA1         <-----                                                                     --------->ANAC55(2)   <---------ANAC55(2)                                        <----------DOF2              <---------ANAC55(2)   --------->ANAC58                                 -------->P                          --------->bZIP60(1)   --------->ANAC46                                <-----------GT1                      --------->ANAC46      --------->ANAC55(2)                              <---------MYB52(2)                   <-----------GT1         --------->ANAC58                            <-----------GT1               <------ZmHOX2a(1)    --------->bZIP60(2)   acacatacaactcaaattctacatactaagttactaacctttctttttttcatatatagaggacagtttttacgtcataccacttcatcgtctacgtaag  29319000  Previous    Next  AGI:  At1g77960.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G28630.4) Range:  from: 29314951    to: 29318465    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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