Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <---------ANAC58                                    --------->GLK1(2)                                    <---------ARR11(3)                               --------->ANAC58                                    <-----------ARR10                     <------NtERF2          ----                                    --------->ARR14(2)                    <---------ZAT2    ------>MYB46(1)                                    --------->ARR11(3)                    --------->ZAT2 --------->MYB46(3) ------->ANAC58                     <---------ARR14(2)            --------------------->WRI1------>MYB83 ------->ANAC58                    <---------ARR14(1)<---------ZAT18      <---------At4g35610 <------ ----ID1                      <------ZmHOX2a(1)   <---------ANAC58<----------DOF2    --------->ANAC58 >MYB52(1)               <----------DOF2<---------YAB1 <----------DOF2    --------->At4g35610 -------   caagacaatcggctcgaggtttactagctttaggagagtatcttcatagacttcgtgctcttagttctctttgggcagctcgtccacaagaaccaactta  29305500                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ----                 <----------DOF2                                                                 <---          <---------YAB1   --------->ANAC58                                                     -----       --------->ICU4      --------->ANAC46                           ---------->DOF2        --------   <------ZmHOX2a(1)       --------->ANAC58---------->DOF2      --------->YAB1    =================== ------>DOF2<---------AHL20(2)           --------->YAB1         <---------ICU4    <------ZmHOX2a(1) < ---------AGL15  --------->TOE2(3)--------->At4g35610          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)-- -------->AGL15  --------->TOE1(3)<---------At4g35610     --------->YAB1          ===================   aaagaggaacttattaaaactttaaaaacaagaaacagcagaatcaaaagtcttgaagaagcatactcatcacaaagcttggaaggatgttttaaaaaag  29305600         <---------AHL20(2) ----ZmHOX2a(2) ------ARR11(3) ------ARR14(2) ----->ARR11(3) ----->ARR14(3) ----->ARR14(2)                                      --------------->AGL15 ------ARR14(3)                                      <---------------AGL15 ---->RVE1(1)                                        <----------DOF2 -->DOF2 --------->AHL20(2)  <---------YAB1<---------TOE2(3)   --------->ARR11(3) ====HOX2a_HOX2a       --------->GLK1(2)   <---------TOE1(3)   <-----------ARR10 ----------DOF2       <---------GLK1(2)<---------DAG2<---------DAG2             ----------->GT1 ---->ZmHOX2a(2)<---------ZAT6--------->ATHB12    <-----------GT1      --------->LBD16 =====HOX2a_HOX2a   ----------->ARR10  <----------DOF2         <---------ARR11(3)          <-------GAMYB   atctttgttaattaagtagagtgagattctcttgattagaactttatggtttttgctttatgaagtatctctccagagaagattgtaaatttgggttgaa  29305700                 <-------TEIL                --------->CCA1(2)        <---------AHL20(2)       --------->AHL20(2)                                                           <---------YAB1       --------->AHL20(1)                                                         <--------HAHB4       <---------AHL20(1)                                            ------->TEIL<---------YAB1       <---------AHL20(2)                                 <---------ZAT14   <---------TOE2(3)       --------->ARR11(3)                                 --------->ZAT14 <---------AHL20(2)       <---------ARR11(3)         <---------GLK1(1)       --------->ZAT18--------->AHL20(2)   actttgtaatatatttagatacaacaaataagtttgaaatctgagcaatttgataatatgtgtactgaatgtatatttaatgtattattaagggactaat  29305800                          --------->YAB1                          ----------->GT1                                       <---------HSFC1(2)                   --------->ZAT18                                              --------->HSFB2a(1)              ---------->DOF2                                                   --------->HSFC1(2)          --------->WOX13(1)                                                    <---------HSFB2a(1)         --------->AHL20(2)       <-----------GT1                         <---------MYB52(1)         <---------AHL20(2)      <-----------GT1 --------->ZAT14         <-------GAMYB <---------TOE2(3)        <---------ATHB12<------------CBF     <---------ANAC58           <---------ANAC58      *TSS    ------------>CBF  <---------YAB1         <---------ANAC58           <---------ANAC58 <------ZmHOX2a(1)   gtgaaactcaataaatcaaagggtactattgtaattttcccatcgttgcgcttcagtcgtccacaaaaaaacttccgttggaattttctgaggaaaatga  29305900                                             <------MYB46(1)                                             <------MYB83                     <---------ANAC58                                           <--------P                         <---------ANAC58                                           <---------MYB52(1)            <---------At4g35610                                          <-------GAMYB             <---------ANAC58                     ---------->DOF2     <---------MYB46(3)         <---------ANAC58                -                  ----------->GT1        <------MYB46(1)<------ZmHOX2a(1)--------->At4g35610 --------              ---------->DOF2            <------MYB83<---------LBD16<---------ANAC46<---------MYB46(3)   gaaaattcaattgaagaaaagagtaaagaagaagtctcttgttcggttggatttttcaggaatttcattttcgtgagcttacttgttcgttcatataaag  29306000                                                             <------MYB83                          <---------GLK1(1)     ------>ZmHOX2a(2)                       <---------YAB1 --------->ANAC58     <--------P            <---------AHL20(2)        --------->ANAC58    <---------ANAC46            --------->AHL20(2)        --------->ANAC55(2) <-------GAMYB    <---------YAB1 -------->ALFIN1   ------->TEIL       --------->ANAC46<---------LBD16    --------->CCA1(2)        --- -->DOF2  <---------WOX13(1) <---------LBD16 --------->ATHB12<------MYB46(1)                      <--   aggtggaatttgatttatatgaattttgatttctgggtttacgaaattgatcggtttctgggttggaacttgaagttatgagcaatcttcgagctatctg  29306100                               <---------REM1(1)              <---------TOE1(3)                             <-------GAMYB              --------------->AGL15        <----------DOF2                          <---------ANAC46              <---------DAG2              <---------DAG2            --------->ZAT14 <-----------RAV1(1)         <----------DOF2            <------NtERF2 ------>ETT(2)            <---------ANAC58          <------ZmHOX2a(2)   --------->AHL20(2) -------ETT(2)            <---------ANAC58  ---------->DOF2   <---------TOE2(3)   ------>NtERF2   tagaccatactctgtgttctcttcgattgtgtgttgtagtagacatcaaagtcgatcactttttagggtttcgattaaaaacgtcgcctttagaaaccag  29306200                                             <---------ANAC58                                             <---------ANAC46                                             <---------ANAC58                                    --------->ATHB12                                  <---------ARR14(2)                                  --------->ARR14(2)                                  ------->TEIL                                  <---------ARR11(1)                  --------->MYB59 --------->GLK1(2)    <---------ARR14(2)           <---------CCA1(2)         <------ZmHOX2a(1)                     ----    --------->ARR14(2)           <---------ARR14(1)     --------->At4g35610                      <---   agttcgaattcgtcttggtttaggtctaaaaattcgaatctttggtttcgtttgaatcagaggaagactctagttagagcatcgaattggagccaagaga  29306300                                                 --------->ANAC55(2)                                       <---------HSFB2a(2)                                       --------->HSFB2a(2)                                      <---------LBD16                                 <---------------AGL15                                 --------------->AGL15                        <-------GAMYB                                ----------------->AG------->TEIL             --------->MYB55(2)                                ----------------->AGL1                       <---------MYB46(3)                                <-----------------AGL1                       --------->MYB111(2)                                ----------------->AGL2                      <--------P         --------->ARR14(2)    <-----------------AGL1                      <-------GAMYB       <---------YAB1          <-----------------AG<---------CCA1(2)      <---------MYB46(3)    ------>ZmHOX2a(1) <---------HSFC1(2)      <---------AHL20(2)         <---------AtMYB61 ----->GLK1(1)        --------->HSFC1(2)--------->LBD16                  --------->ALFIN1      <----- ------GLK1(1)        <---------At4g35610    --------->AHL20(2)   <----------DOF2    <-----------GT1   aatctccttacgatactctcggtaagcttcttctaccaattcgggaattttatgtatcttacagtttcctttgatgtggttgttgattcacaagtttgtg  29306400  Previous    Next  AGI:  At1g77920.1    Description:  bZIP family transcription factor. Identical to Transcription factor TGA7 (TGA7) [Arabidopsis Thaliana] (GB:Q93ZE2;GB:Q9SH09); similar to TGA3 (TGA1a-related gene 3), DNA binding / calmodulin binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G22070.1); similar to bZIP transcription factor [Brassica juncea] (GB:ABU96774.1); contains InterPro domain bZIP transcription factor, bZIP-1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) Range:  from: 29303137    to: 29305757    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g77930.1    Description:  DNAJ heat shock N-terminal domain-containing protein. similar to DNAJ heat shock family protein [Arabidopsis thaliana] (TAIR:AT3G17830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61779.1); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609) Range:  from: 29305894    to: 29307533    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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