Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->GLK1(2)                    <---------ARR14(2)                   --------->GLK1(1)                   <---------GLK1(1)              --------->LBD16              <---------LBD16              <---------ANAC46                            <-----------HVH21             <---------LBD16                    <---------MYB46(3)                                 ==            ------>MYB46(1)                    <---------AtMYB61                                   <-            --------->MYB52(1)               <---------MYB46(3)                                    ==            ------>MYB83                     --------->MYB55(2)                     <---------ANAC46           --------->MYB55(1)               <---------DEAR3(1)          ----------->HVH21     =======           ----------->HVH21                <---------AtMYB61         <---------At4g35610     -------         ----------->RAV1(2)                --------->ALFIN1      --------->ALFIN1 --------->At4g35610       <-----------GT1                   <---------DEAR3(1)<------NtERF2--------->ALFIN1 <------ZmHOX2a(1) --------ANAC58 <------NtERF2         ----------->HVH21   <---------RAP2.6(3)      <---------At4g35610 --------ANAC46--------->LBD16       --------->ATERF1(1)--------->ATERF1(1)       --------->MYB52(1) --------ANAC58------>NtERF2      <------ZmHOX2a(1)--------->MYB52(2)<---------AtMYB61 --------->ALFIN1   ttcgtgtatatacctgccgggaaatctgaggggagaggagacgacggtggtggtagtggccgtcgagggtggaggtgatggagatagcggaggagcaaaa  29283000                               --------->ALFIN1                             ==========================bZIP_DOF                             <---------bZIP60(2)                             --------->TGA1a                             <---------ANAC46                             <---------ANAC55(2)                             <---------TGA1a                             <---------ANAC58                             --------->ANAC55(2)                             --------->O2                             --------->bZIP60(1)                             <---------bZIP60(1)                                          -----------                             <---------O2                                                 <----------                             <---------ANAC58                                            --------->DREB2C(2)                            ----------->STF1                                             --------->DEAR3(1)                            ----------->bZIP910(1)                                       --------->At1g77200                    --------->ARR14(2)=================bZIP_DOF                          ----------->HVH21                    <---------ARR14(2)--------->TGA1a                                   --------->DEAR3(2)                 <---------ANAC46     <---------O2                      <-----------HVH21--------->DEAR4(1)        <---------ANAC46   <---------TGA2(2)               <---------ANAC58         <-----------HVH21      <---------MYB46(3)  ----------->TGA1  ---------->DOF2<---------ANAC46      --------->O2     <---------AtMYB61    ----------->HVH21 ===============================================bZIP_DOF ======================================bZIP_DOF            <---------ANAC58      --------->TGA1a ---------DOF2  <---------At4g35610   <---------TGA1a  <---------HSFC1(2)        <---------O2     <-- ======================================bZIP_DOF        --------->HSFC1(2)   --------->ANAC58      --- ======================================bZIP_DOF        <---------HSFB2a(1)  --------->ANAC58      <-- --->DOF2      --------->MYB52(1)     --------->O2     --------->HSFB2a(1)  --------->ANAC46      <--   gctttcgatggtggagatagcggatttgatgacgtggcagacgtcccaaagcttggaagtttcgtccatgtagtcgtcaagccacttgtcaccgacaggg  29283100      --------->GLK1(2) >RAV1(1)--------->HSFB2a(2) -HVH21  <---------HSFB2a(2)                                                                     ---- -------MYB46(3)         --------->At4g35610                                                    ----- -------->GT1            <---------At4g35610                        <------ZmHOX2a(1)   --------->MYB111(2) ----MYB83           <-----------HVH21               --------->At4g35610                <---------MYB46(3) ----MYB46(1)       --------->ALFIN1     <-------TEIL<---------At4g35610      <------ZmHOX2a(1) <----   aggttaagtttctggacaagaagtgtgagatgagagtgagaggttcttagaagacagatgactctctgtaggaactgtaaggacatgaagttgttggaga  29283200             <---------ARR14(2)             --------->ARR11(3)             <---------ARR11(3)             --------->ARR14(3)             --------->AGP1                                                            --------->TOE2(3)             --------->ARR14(2)                                                        --------->TOE1(3)             <---------ARR14(3)                    <---------ZAT14             -------->ATHB1          <---------HSFB2a(2)                      --------->WRKY12            --------->ATHB12          --------->HSFB2a(2)                      --------->ZAT14             <---------ICU4      <----------DOF2                             --------->DOF5.7(2)          --------->ATHB51 <-----------GT1                                  <---------MYB52(1)          <---------YAB1   ------ ----->CCA1(2)            ------>ZmHOX2a(2)  --------->GLK1(2)                --------->ICU4   ------ ---->ARR11(3) ------>ZmHOX2a(2)             --------->ARR14(2)            ------>ZmHOX2a(2)   <----- -----ARR11(3)<------ZmHOX2a(2)              <---------ARR14(2)            ------------>ATHB5  <-----   tataaaccctttcgagatcttccattgatctgtttagaaacgagtagaatccgtttactgagtttgaacaagactgatccattattgacccttaaaaaat  29283300                      <---------WOX13(1)                      <--------P           <------MYB46(1)           <------MYB83           <---------MYB46(3)        <-------GAMYB<-------GAMYB       --------->MYB55(2)       --------->MYB111(2) --------->ATHB12       <---------MYB46(3)  <---------ICU4       --------->MYB52(2) <---------YAB1       <-----------RAV1(1)--------->ICU4                                   ----------->GT1 <------MYB83       <------MYB83                                          --------->DAG2 <------MYB46(1)    <---------MYB46(3)                                  ---------->DOF2 --->ARR11(3)       <------MYB46(1)                                    <---------AHL20(2) --->AHL20(1)      <---------AtMYB61                                  --------->AHL20(2) ----AHL20(1)      --------->MYB59                            <------ZmHOX2a(1)                    -- ----ARR11(3)  --------->MYB52(2)     <---------YAB1 --------->CCA1(2)<---------AHL20(2)--------->CCA1(2)   atttggtgtttgttggtttgtttggttgattattggtgagattatagggagagagatttgggaaggagagaattaaaaggttatatagagatttggatgt  29283400                                                                                                    <                                                                                                 ----                                                                                                 <---                                                                                   <---------WOX13(1)                                                                        <------ZmHOX2a(1)       <----                                                                       --------->ICU4           <----                                                                      <---------TOE2(3)         -----                                                                  <---------ANAC55(2) <---------ANAC46                                                                  <---------YAB1  <------------CBF <-                                        --------->YAB1            --------->ANAC55(2)--------->ATHB12            *TSS                     --------->YAB1            --------->GLK1(2) --------->ATHB12<--- ----->TEIL---------->DOF2  ---------->DOF2             --------->At4g35610 ---------->DOF2 ---------   gtatgtatagatgaaaaggagagtgagagagaaagagaataataagaagaagagaagaagcagagattatgtaaggatgaaagtgattgtttggagcaat  29283500         <---------------AGL15        ----------------->AG   <---------MYB46(3)  <--------P                 --------->ATHB12                                       <---------AHL20(2) <-------GAMYB               <---------ICU4                                         --------->AHL20(1) ---------MYB46(3)          <---------YAB1                                          --------->AHL20(2) ----->YAB1                <---------ARR11(3)                      <---------ARR11(3)            ---- ------ICU4               --------->YAB1                           --------->ARR11(3)          ------ -----ATHB51             --------->ICU4             --------->ARR11(3)             --------->AHL20(2) -----ATHB12        <------ZmHOX2a(1)               <---------ARR11(3)       --------->TOE2(3) ------ ---->ICU4------>ZmHOX2a(1)--------->ARR11(3)      <---------CCA1(2)  <----------DOF2        -------- --------YAB1     ----------->GT1   ---------->TaMYB80             <---------ARR11(1)  <---------YAB1 -----ATHB1      <------ZmHOX2a(1)  --------->ARR14(2)            <---------CCA1(2)<---------AHL20(2) --->CBF----------------->AGL1      <---------ARR14(2)--------->TOE2(3)    <-----------GT1<---------TOE2(3)   gatggttgtttcctatagaggaggaaaatgatcattggtatatgctaataccaatatctcaatttttcatatctttttaacttaattttattatggaaag  29283600   <---------YAB1 ----------->GT1 ----->ARR11(3)                                                <---------AHL20(2) --->ANAC58                                                  --------->AHL20(2)      <-------TEIL --->ANAC58    ---------->DOF2    --------->DAG2             <---------AHL20(2)  --------->HSFB2a(2) -->DOF2 ----------->GT1         ---------->DOF2<---------AtLEC2                 <---------HSFB2a(2)   aaattgttattcagaaaaaaagagttgagaattggaaaagtactggtttttcatggaatccatataaatttgtcatctattttctggtacatcggagaca  29283700                                                     <----------DOF2                                                  <---------ARR11(3)                                               --------->YAB1      <---------ANAC58                                            <---------CCA1(2) <-----------GT1          --------->GLK1(2)                               <---------HSFB2a(2)--------->ARR11(3)        --------->ATHB12                <-----------GT1<---------HSFC1(1)<---------CCA1(2) <---------ANAC58   <---------GLK1(2)             --------->YAB1    --------->HSFB2a(2)<---------ARR11(1)       --------->AHL20(2)       --------->YAB1<----------DOF2      --------->YAB1 <----------DOF2   --------->ICU4   taaatgaaattagaatattaactctttttttgtctagaagttactcatatcatatctttctttttttctgcttgggatttattagatagattctttgtcc  29283800                                               <----------DOF2                                            <---------YAB1                                        <---------ARR11(3)                                        --------->ARR11(3)                                       -------->HAHB4                    --------->ATHB12   --------->YAB1                    <---------ICU4     <---------ICU4                   <---------YAB1     <---------YAB1             <---------MYB46(3)       --------->ICU4                                          <------    <---------ARR11(3)              <---------ICU4           <---------AHL20(2)           --------->ANAC46    --------->ARR11(3)<---------YAB1--------->YAB1         --------->YAB1              --------->ARR14(2) --------->AHL20(2)--------->ICU4  --------->ICU4      <---------ANAC55(2)             <---------ARR14(2)   gaataaaatctctagtagttgatgattagtagagcgaataatgatcatgctttcaatacataaataatcgaatattactagtaatttagtatacgacttt  29283900  Previous    Next  AGI:  At1g77855.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G22030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61782.1) Range:  from: 29282060    to: 29283412    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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