Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->MYB52(1)                            <---------MYB52(2)                           --------->ANAC55(1)                <---------WOX13(1)                           --------->ANAC58      --------->LBD16                           --------->ANAC46     <---------ANAC58                           <---------ANAC55(2)  <---------ANAC58                           --------->ANAC55(2)  <---------ANAC55(1)                           --------->ANAC58     <---------ANAC46                   <---------ZAT18              ----------->GT1                   --------->ZAT18              <---------HSFB2a(2)                  --------->ALFIN1              <---------ANAC55(2)                <---------ANAC46                --------->ANAC55(2)                                 <               <------ZmHOX2a(1)             <---------ARR14(2)                                     - ->GAMYB    --------->HSFB2a(2)         <-------TEIL        --------->ATHB12                     <--- -->ANAC46  <---------HSFB2a(2)        --------->CCA1(2)   <---------YAB1                       <---- >MYB52(1)<------NtERF2----------->RAV1(1)   --------->ARR14(2)                               <------   agcaaacagggcatcgaggagtgtgcaacaagtaacgagagatacaagttccgtaaaaaatatgattgcattttgttttatgaacaatctcgtcttcttt  29272200                                                                  --------->ALFIN1                                                                <---------MYB46(3)                                                               <---------AtMYB61                                                               <---------DEAR3(1)                                                              <---------MYB52(1)                                                             <-------GAMYB                          -                                                            <---------MYB46(3)                      <                                                          --------->LBD16                        <---      <---------DAG2                                      <-----------HVH21                   ------>ZmHOX2a(2)      <----------DOF2                                 ------>ZmHOX2a(2)                      <------ZmHOX2a(2) <---------GLK1(1)                                   <---------GLK1(1)                      --------- --------->GLK1(1)                    ----------->GT1<------ZmHOX2a(2)                      <-------- ---------ARR14(2)                 <----------DOF2   --------->GLK1(1)                   --------->SPL7 -------->ARR14(2)        <---------GLK1(2)         <---------ARR11(3)                 <---------SPL7 ------ANAC46             --------->ARR14(2)        --------->ARR11(3)                <---------DEAR3(2) -----LBD16>>>>>>>>>WRKY18<---------ARR14(2)   --------->TOE2(2)<------MYB46(1)      --------------->AtSPL8 ----DOF2 ----------->HVH21--------->GLK1(2)   --------->TOE1(2)<------MYB83         --------------->AtSPL3   cggataccctttttgacagagacaacaagattccgaactttggtaacaatctacgatctccgtcgttggtggagcaattggtacaggtctgtacgatctt  29272300                                                   --------->ANAC58                                                  <-------TEIL                                                  --------->SPL7                                               <------MYB83                                               <------MYB46(1)                                              --------------->AtSPL3                                              <---------------AtSPL3                                           --------->LBD16                                         <-------MYC3                                         <---------LBD16                                         ------->MYC3                                        <---------TGA1a                                        --------->ANAC58                                        --------->ANAC58                                        --------->ANAC46                                        --------->O2           ------>ZmHOX2a(2)                    -                                        --------->TGA1a      <---------GLK1(2)                     <-                                        <---------O2         <---------ARR14(2)                    --                                     <---------ARR14(2)      --------->ARR14(2)                   <--                                    ==================================HOX2a_HOX2a                 ---                                    =================================HOX2a_HOX2a                  <--  ------>MYB83                      <------ZmHOX2a(1)        <---------ARR11(3)                   <--  ------>MYB46(1)                  --------->ANAC58<---------TOE1(1)                              --- -------->AtMYB61                  --------->ANAC58--------->ANAC58        --------->DAG2         <-- ---------MYB59       ============================bZIP_DOF   <---------ARR14(3)                   --- ------WRKY18(1)      ---------->DOF2--------->ARR14(2)      --------->ARR14(3)                   --- >ARR11(3)      ---------->DOF2<------ZmHOX2a(1)<---------SPL7<------ZmHOX2a(2)                   <-- -ARR11(3)      ==================================bZIP_DOF   --------->ARR11(3)                 -----   gaccaaaccctctaatttgaaagtgaaagacgaggacaggacacgcgggaggtacgatatcaagatccttgaatgaaaaattggagacaatatagtcgaa  29272400                                                     --------->TOE1(2)                                                   <---------ARR14(2)                                                   <-----------ARR10                                                   --------->ARR14(2)                                                   <---------ARR11(1)                                                  ------>MYB83                                                --------->AtMYB61           <-----------RAV1(1)                  <---------MYB59       <---------ANAC58                       ------>MYB83       <---------ANAC55(2)                   --------->ORA47(1)       <---------ANAC58                     --------->DEAR3(1) <---------YAB1                             ------->GAMYB ----->ZmHOX2a(2)                          <---------MYB55(2) -----ZmHOX2a(2)                           --------->MYB46(3) ------->CCA1(2)                           --------->DEAR3(2) -------AGP1                              -------->P --------->TOE2(2) ------>ARR14(3)                          ------>MYB83 -------ARR11(3)                          ------>MYB46(1) -------ARR14(3)                          --------->MYB52(1) ------>ARR14(2)                         --------->MYB52(1)                                        -- -------ARR14(2)                         --------->MYB55(1)                                   ------- ------>GLK1(2)                         --------->AtMYB61                                     ------- ------>ARR11(3)                        --------->MYB46(3)                          ------->TEIL  <-- ---------ARR10                   ---------->DOF2 ------>MYB46(1)                  <-----------GT1<-- ------>ARR10                   <---------YAB1------>MYB46(1)  <----------DOF2<----------DOF2------>ZmHOX2a(1)   gatctgattacttatgttggactcgcgttgcatcatgaaagaccaaccgaccaaatctacgaatgctttggacaatccagcttttgaacctcttcctcgt  29272500                                             <---------ATHB12                                             --------->MYB46(3)                                            -------->P                                         ------                                            ------>MYB83                                       ------                                            ------>MYB46(1)                         --------->At4g35610                                     <---------ANAC58                               <---------At4g35610                                     <---------ANAC58                             --------->bZIP60(1)     ------>ZmHOX2a(1)               --------->ALFIN1                             <---------bZIP60(1)     <---------ANAC46               ------->MYC3                                ----------->RAV1(1) ---->ZmHOX2a(1)             <-----------HVH21   <---------ICU4                 <---------DDF1 ------ -->TOE2(1)          --------->YAB1<---------TGA1a                             --------->DEAR3(1) -->TOE1(1)       --------->WOX13(1)<-------MYC3<---------MYB52(1)             --------->At1g77200 -------ANAC58 <-----------HVH21   --------->TGA1a                             --------->DREB2C(2) -------ANAC58<---------ANAC46     ==================MYC_MYB                   --------->DEAR4(1)  <-   ccttgtcctgtgtatcgcgtcaatcgaaaccgttcacatgtgtgccaaccattagtacctccataacttactaatacaacaccgacatcagactcacaag  29272600                                              <-----------GT1                                           --------->ATHB51                                           <---------ICU4                                           <--------HAHB4 --->ANAC46                               --------->ICU4                                            < --->ANAC58                               <---------YAB1<------------CBF                          <-- --->ANAC58                             --------->YAB1<---------YAB1  <-----------GT1            <--- ------TEIL ---------->DOF2          --------->GLK1(1)------>ZmHOX2a(1)  <----------DOF2       <-----   gcacatcaaacttgtaaagcctgagattaccgagaagagatttcataattactctccttattgttttttttttttcttttgttcaaactatacaagtcta  29272700                                                                            --------->YAB1                                                                     <---------AHL20(2)                                                                     --------->YAB1                                                                     --------->AHL20(2)                                                                    <---------YAB1                                                                  <---------ICU4                                                                  -------->HAHB4                                                                  <--------HAHB4                         -------->HAHB4                           --------->YAB1           --------->YAB1                         --------->YAB1                     --------->YAB1 <---------YAB1  -------->ATHB1                         <---------ICU4                 ---------->DOF2    <---------AHL20(2)<-------                        <---------YAB1                 ------>ZmHOX2a(1)  --------->AHL20(2)<--------                      --------->YAB1              <----------DOF2 <--------ATHB1           --------->ATHB12            <---------ZAT18                      <---------ANAC58 --------->ATHB51         <---------ICU4     <----------DOF2 <---------YAB1            <---------AHL20(2)<---------ATHB51         <---------ATHB12 -----------GT1    --------->YAB1              <-----------GT1   <---------YAB1        --------->AHL20(2) -------WOX13(1) <-----------TBP           <---------AHL20(2)    --------->AHL20(2)    <---------AHL20(2) ---------CBF   <----------DOF2            --------->AHL20(2)  --------->YAB1       --------->YAB1 ----YAB1   --------->ZAT18      --------->AtLEC2<---------ANAC58--------->ICU4    <---------YAB1   attgactctttttgtgcccttttataataatagccatgcctaagtttaattactttcctaaagaataataattatatataatagtataataaatcattgt  29272800                                       <---------AHL20(2)                                      <---------YAB1                                   --------->AHL20(1)               ----------->GT1     --------->AHL20(2)              --------->DAG2       <---------AHL20(2)             ---------->DOF2       <---------AHL20(1)      --------->YAB1           --------->AHL20(2)     <---------YAB1            <---------AHL20(2)              --------->YAB1   <--------HAHB4              <---------AHL20(1)           --------->WOX13(1)   --------->YAB1              --------->AHL20(1)         ------------>CBF                 --------->DAG2  <---------YAB1         --------->ANAC58             --------->AHL20(2)       ----------->GT1  --------->ICU4         --------->ANAC46             <---------AHL20(2)      --------->DAG2 --YAB1 <---------YAB1   --------->ANAC58          <----------DOF2           ---------->DOF2  ------- ----CBF----------->TBP  --------->ANAC55(1)   <---------CCA1(2)        --------->YAB1    ---------->DOF2   agctattattataaataaagtatatacaagtaataaatttattatttgtttatcttttaattcaattagattaatcacaaaaagtaaaactaaaaagtgt  29272900                             --------->YAB1                           <---------WOX13(1)                             ------>MYB46(1)                     <---------ANAC46                                     ------>MYB83                  <---------CCA1(2)                     ----------->RAV1(1)      <----------ID1              <---------ANAC46                     <---------YAB1        --------->WOX13(1)--------->AHL20(2)              <---------ANAC58 <---------YAB1    --------->YAB1      <-----------GT1       <---------AHL20(2)              <---------ANAC58<---------TOE2(3)  <---------ICU4 <---------AHL20(2)        --------->AHL20(2) -->ALFIN1<------------CBF<------------CBF      --------->ICU4 --------->AHL20(2)----------->HVH21  -   tgatatagaatgaattgcttgtctcttggattgatgattctatcaactaaattatgaccagcatatataatataccaatctaagtgacaaaaattaattc  29273000                                                                         <---------AHL20(2)                                                                       <---------CCA1(1)                                   <---------AHL20(2)                  <---------RVE1(1)                            <-----------GT1                           --------->ARR11(3)                      <---------AHL20(2)                              <---------ARR11(3)                   --------->ARR11(3)                               <---------TOE2(3)                   <---------GLK1(2)<---------YAB1             --------->ALFIN1            <-----------HVH21    <---------YAB1             --------->DAG2     <-----------GT1<---------RVE1(1)                      ---------->DOF2 -------->ANAC55(2)<---------ARR11(3)  <-----------GT1  --------->AHL20(2)       <-----------GT1   ttatgtattacatttgtcacagatttttttatactattattttacatttgtcaacaaaataaaaagtgttgagattttttttttcacagtttttttttgt  29273100  Previous    Next  AGI:  At1g77830.1    Description:  zinc finger (C3HC4-type RING finger) family protein. contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 29272054    to: 29272646    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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