Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->LBD16                                                                          --------->ANAC58                                                                          --------------->AGL15                                                                          --------->ANAC58                                                                         <-----------------AGL3                                                                         ----------------->AGL3                                                                         <-----------------AG                                                                         <---------LBD16                                                                         ------>ZmHOX2a(2)                                                                         ----------------->AGL2                                                                         <-----------------AGL1                                                                        <------ZmHOX2a(2)                                                                       <---------ARR14(2)          --------->At4g35610 --------->ZAT14                          --------->ARR14(2)       <----         --------->ANAC58     <---------ZAT14                          <---------GLK1(2)        -----         --------->ANAC58--------->ZAT18                             --------->LBD16       --------->ANAC58 --ZmHOX2a(1)--------->MYB52(1)                 --------->MYB46(3) <---------LBD16         --------->ANAC46 --->ANAC46  -------->P  --------->ZAT14      <-----------GT1    <-----------GT1       --------->YAB1 --LBD16 --------->ANAC46<---------ZAT14   --------->YAB1   --------->ICU4--------->ANAC46 --------->ANAC58   aaactatccataagctaccagataaactacactatacagttctaattttaaccaatagagtgagtattaaccggatccgcaaatggcaatcgcaagcaaa  29252500                                                --------->GLK1(2)                                                ------------------------>ANAC81                                     ------>ZmHOX2a(2)                                    --------->CCA1(2)                                    <------ZmHOX2a(2)                                   --------->ARR11(3)                                   <---------AGP1                                   --------->AGP1                                   <---------ARR11(3)           <------ZmHOX2a(2)       <---------ARR14(2)                                  --------->MYB52(1)          <---------ARR14(2)       --------->ARR14(2)                               --------->ANAC46          --------->AGP1          <---------CCA1(2)                       --------->AtLEC2          --------->ARR14(2)    --------->HSFB2a(2)                    <-------TEIL --------->ANAC58  <---------ICU4                <---------HSFB2a(2)         <---------AHL20(2)      --------->ANAC58- -----ARR14(2)        --------->AtLEC2   --------->REM1(2) <---------AHL20(2)  --------->DAG2   <---- ---->ARR14(2)---------->DOF2  ----------------->AGL1      --------->AHL20(2) ---------->DOF2 <------   ttcacaattacagatccaaagacgatgcaaaattccagatctgtgaagaaattctggcaaattaaatccaaaattcatgcaaaagtaagcaacgatttta  29252600                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                              <<<<<<<                                                                                              <<<<<<<          --------->YAB1                                         --------->ANAC46             <------ZmHOX2a(2)         <---------ATHB12                                   <----------DOF2                   <<<<<<<     --------->ANAC58                                  ------>ZmHOX2a(2)          <-----------ARR10     --------->ANAC46                                 <------ZmHOX2a(2)           --------->GLK1(2)     --------->ANAC58                                --------->ARR11(3)          <---------GLK1(2) <-    --------->LBD16                                  <---------ARR11(3)   ------>MYB46(1)     <<<<<<< <------ZmHOX2a(2)                                   --------->ARR14(3)   ------>MYB83       -------- -------->ARR14(2)                                   <---------ARR14(3) --------->TOE2(3)    <------- -------GT1                     --------->ZAT6      --------->GLK1(1)   <---------MYB59      <------- ---AHL20(2)               --------->YAB1      ----------->RAV1(2)   --------->GLK1(1) <---------TOE2(3)   tcgatccacgaatcatacaattcaatgtttgataacacaaaaaacaatgacctgagatctcgcttaaacggaaacctaatcgagaatctaagatagatct  29252700   ----------->GT1  --------->ANAC58  --------->ANAC46  --------->ANAC58 <---------LBD16 -----------AGL15 ---------->AGL15                --------->GLK1(2) ------------AGL3                --------->ARR14(2) >ZmHOX2a(2)                     <---------ARR11(1) <<GATA-3                        ------->TEIL <<GATA-4                        <---------ARR14(2) <<GATA-2                <----------DOF2                       ------->TEIL --------REM1(2)      <---------ARR11(3)                 ----------->TGA1 <<GATA-1             --------->ARR11(3)                 ----------->HVH21 ->ARR11(3)          --------->GLK1(1)                 <---------At4g35610                   -------- --AGP1        --------->GLK1(2)<---------CCA1(2)      --------->At4g35610           <-----------GT1 --ARR11(3)   <---------GLK1(2) <---------ARR14(1)   <------ZmHOX2a(1)   <------ZmHOX2a(1) <---------LBD16   ctatacggaaacttaagaatcggagacctttagcgaatctcaaatttggagagaaggagatgacgaatttcaacaggataagagattaaacgatgcggaa  29252800                                            ------>NtERF2                                            --------->LBD16                                           <---------ANAC46                                          --------->ATERF1(1)                                          <------NtERF2                                          <---------LBD16                                         ------>NtERF2                                         <---------DEAR4(2)                                         <---------ERF1                                         <---------RAP2.3(1)                                         <---------ATERF1(1)                                        <---------DEAR3(1)                                        <---------RAP2.3(2)                                        --------->DEAR3(1)                                        --------->ATERF1(2)                                        <---------ATERF1(2)                                       --------->ATERF1(1)                                       <---------LBD16                                     ------>ZmHOX2a(2)              <---------TOE2(3)                                    <------ZmHOX2a(2)           <----------DOF2     --------->LBD16               --------->ARR14(2)         <---------ZAT2    --------->ANAC58               <---------ARR11(3)  <---------At4g35610                      <xxxx    <------NtERF2<---------ANAC46  --------->ARR11(3)  <---------ZAT2                           -----    --------->ANAC58               <---------ARR14(2)  <---------GLK1(1)                       ------   <---------LBD16        --------->At4g35610<------NtERF2    --------->ZAT2 <---------------AtSPL8   ------>NtERF2<---------LBD16 <------ZmHOX2a(1)      --------->GLK1(1) --------->YAB1    <---------  <---------ANAC46--------->LBD16 <---------GLK1(1)    --------->At4g35610 <---------YAB1 ----------- ->LBD16       --------->MYB52(1) --------->GLK1(1)    --------->ZAT2 <------ZmHOX2a(1)---------->DOF2   gaaggcgcggaaaacagtaccggagagaagcggaggagatcgccggcgggaagagagagctccgagcttgaaggatgatgatgtacagagaaagggaaaa  29252900                         --------->ANAC58                         --------->ANAC46                         --------->ANAC58                      <---------SPL7                     <---------ANAC46                     <---------ANAC58                     <---------ANAC58                    <---------TOE2(3)                                                               <                    <---------------AtSPL3                                             ------>ZmHOX2a(1)                    <---------------AtSPL8                                      <------MYB46(1)    --                <------------CBF  --------->ANAC58                              <------MYB83   <-----                *TSS--------------->AtSPL3                                    <--------P      <------       <---------ANAC58 --------->SPL7                                       <-------GAMYB    <------ xxxxxxxxxxxxsmallRNA(se3)  ---------->DOF2                                 <---------MYB46(3)------- ---->DAG2 <---------HSFB2a(2)    --------->ANAC58                         <---------ANAC58   ------- ---->DOF2 --------->HSFB2a(2)  ---------->DOF2                            <---------ANAC58   <------ -ID1  <---------ANAC58 <-------TEIL                <----------DOF2        <---------ANAC46   ------- >GT1  <---------ANAC46 ------->TEIL  ---------->DOF2    <----------DOF2  <---------LBD16    <-------   agtgagattgcttctacaaattgacgtacgcaaagaaagccaaagaagaagactcttttctttttgattttaaacttgcggttggattcctatatgtcgt  29253000        --------->MYB52(1)     --------->ANAC58     --------->ANAC46     --------->ANAC58 ---------ICU4 ------->ICU4                                                 --------->CCA1(2) <---------YAB1 ------TGA1                                                --------->ANAC46    <---------AHL20(1) ---TGA2(1)                                          <---------ANAC46          --------->AHL20(2) ---ETT(2)                                     <---------ARR11(3)              <---------AHL20(2) -->ETT(2)                               ----------->GT1<---------ARR14(2)   <---------YAB1 --------- -->TGA2(1)                --------->ARR14(2)  --------->ARR11(3)    <---------ZAT14       --------->SPL7 ---bZIP60(1)              <---------ARR14(2) --------->GLK1(1) ----------->HVH21         <---------MYB52(1) -->bZIP60(1)              <---------GLK1(2)  <---------GLK1(1) <---------YAB1--------->YAB1--------- ----STF1    <---------MYB52(1)   ------>ZmHOX2a(1) <---------LBD16  <---------At4g35610 <---------SPL7   cattttgacgcaaccgtttttctcatccaaattctcctatcgatggtgatatctcgcgcatacgatatgactgctgtttattataatgggccgtaagccc  29253100                      --------->ARR11(3)                      <---------GLK1(2)                                               --------->AHL20(2)                      <---------ARR14(2)                                         --------->AHL20(2)              --------->AHL20(1)                                                 <---------AHL20(2)              <---------AHL20(1)                                                 --------->AHL20(1)              --------->AHL20(2)                   <-----------GT1           --------->AHL20(2)     <---------MYB46(3)                      --------->ANAC58               <---------AHL20(2)    ---  ------------>MYB.PH3(2)                    --------->ANAC58               --------->AHL20(2)   ---- >ANAC58      <---------AHL20(2)           --------->CCA1(2)        ----------->GT1  --------->AHL20(2) >ANAC58     --------->AHL20(2)           <----------ID1  <-------TEIL    --------->YAB1         ----   atttagtttgttagaataaattcagattttgtagagactagagagagacgaaattacacattcgttttatatgtaaaaataaataaaataaaaaatggaa  29253200         --------->AHL20(2)                                    <-----------GT1   --------->YAB1      --------->YAB1          <---------ANAC46            <---------AHL20(2)     --------->AHL20(2) -------->RAV1(1)     <---------AHL20(1)              <---------AHL20(2)        <---------ATHB12 ----->ANAC58         <---------ARR11(3)              --------->YAB1          --------->WOX13(1) ----->ANAC58   <-----------GT1                       --------->AHL20(2)  <-----------GT1   cgacagaatgatataatataacaatatatgttctgtatatttgaattgaaacacatttatattttttactggataatcaccaattaaaaaaactaattgc  29253300                  --------->AHL20(2)              <---------AHL20(2)             --------->AHL20(2)         <---------ARR11(3)         --------->AHL20(2)         <---------AHL20(1)         --------->AHL20(1)         --------->ARR11(3)         <---------AHL20(2)           --------->GLK1(2)                                     <------ZmHOX2a(1)      --------->AHL20(2)        <---------AHL20(2)                                    ------>MYB46(1)     <---------AHL20(2)         --------->AHL20(2)                                  <---------MYB59 <     --------->AHL20(2)     --------->AHL20(2)                        <---------ATHB12------>MYB83<-- --------->AHL20(2)         <---------AHL20(2)                 <-----------GT1   <-----------GT1  <-- <---------AHL20(2)        --------->AHL20(2)  <---------YAB1<---------MYB52(2)<---------MYB52(2) <--   acattaattaatatattaaataaaacaaaattaataaaacaatctagttatgagcatagtccaaataacccaattagtccaaataacccaactaggacta  29253400  Previous    Next  AGI:  At1g77770.1    Description:  protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G08460.1); similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G08460.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61799.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Protein of unknown function DUF1644 (InterPro:IPR012866); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 29250968    to: 29252916    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g77780.1    Description:  glycosyl hydrolase family 17 protein. similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT1G77790.1); similar to Glycoside hydrolase, family 17 [Medicago truncatula] (GB:ABN05913.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 29253194    to: 29254422    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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