Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->LBD16         <---------ANAC58         <---------ANAC58         <---------ANAC46        <---------LBD16        <---------At4g35610        --------->At4g35610      <--------P     <-------GAMYB    <---------MYB46(3)   --------->ALFIN1    --------->ALFIN1 <---------ANAC46    <---------ANAC46 --------->DEAR3(1)  <---------ANAC58                                        <-------GAMYB ------ZAT14         <---------ANAC58   ------->TEIL                        <---------DEAR3(1) ----->ZAT18 --------->ANAC58 <---------ZAT14                               <---------ANAC46 ----->ZAT14 --------->ANAC55(2)<---------ANAC46                         <---------DEAR3(1)     <---- ------ABI4(2)  --------->MYB52(1)   <---------YAB1                  <-------TEIL              ------ -->At4g35610--------->ANAC58 --------->ZAT14                       --------->ALFIN1         <------- --ARR14(2) --------->SPL7--------->ARR14(2)                     --------->ALFIN1     ------->TEIL ->ARR14(2)------>NtERF2  <---------ARR14(2)     <-------TEIL<------ZmHOX2a(1)   <---------AtLEC2  --   gcaccgtggttgcggacgtaatggagtggaactggagtgatgaatccatggtgcataagacgaggaagaggtgcttcggcgttgaatggatgttttccgg  29243900                                                                       --------->HSFB2a(1)                                                                       <---------MYB46(3)                                                                       <---------HSFC1(2)                                                          --------->ARR14(2)                                                          <---------AGP1                                                         <---------CCA1(2)                                                  <---------CCA1(2)    --------->HSFC1(2)                                  <-----------HVH21   <---------LBD16  <---------DEAR3(2) -------HVH21                   --------->MYB46(3)<---------At4g35610 <---------DEAR3(1) --->LBD16          <---------ANAC46           <-------TEIL<------ZmHOX2a(2) --LBD16            <---------ANAC58      <---------MYB52(1)------>ZmHOX2a(2) --------->HVH21    <---------ANAC58    <---------MYB46(3)<---------ARR14(2)                     <---   tgagacggagcatggatgagttacgttgaatccaactatcagccgttgattcatctctcggatctaaaatcgacggttctaaatcgctgtttgatttttt  29244000                            <---------ARR14(2)                  <------NtERF2      --------->ALFIN1                            <---------MYB52(1)               --------->ATERF1(1)   <---------AtMYB61                            --------->ARR14(2)            <------ZmHOX2a(1)        <---------DEAR3(1)                           <-------GAMYB             <----------DOF2            <---------DEAR3(1)                         <---------ANAC46           <---------ANAC58         ----------->HVH21                    --------->ANAC58                <---------ANAC46         --------->ANAC46      <----------DOF2  --------->MYB52(1)           <---------ANAC58      <---------ETT(2)    <---------------AGL15<---------TOE2(3)       <------NtERF2  <---------------------WRI1    --------------->AGL15<---------TOE1(3)      <-----------HVH21      ------->GAMYB<---------MYB46(3) --------GT1        --------->ANAC58           <---------DEAR3(1)     <------------AtMYB77        <--   aaccagctctttgtagtaagggacgttacggttatggctctcgtcttcgtcgtcgcttgaggagtcgtcgtaactgtctacgacggtggtgatgacttcg  29244100                                                              <-------GAMYB                                                             <---------MYB46(3)                                                            <---------ANAC58                                                            <---------ANAC46                                                            <---------RAP2.6(2)                                                            <---------DREB2C(2)                               <---------ANAC46             <---------ANAC58                               <---------bZIP60(1)         <------NtERF2                               --------->bZIP60(1)         --------->ATERF1(1)                               <---------O2           <---------DREB2C(2)                               <---------bZIP60(2)    <---------ANAC46                               --------->O2<------MYB46(1)------>NtERF2                              ----------->STF1        <---------DEAR3(1)                             <---------TGA2(2)     ----------->TGA1      <---------TOE2(3)     ----------->TGA1       ----------->HVH21    ----------->HVH21       ----------->HVH21   <---------AtMYB61  <----------DOF2         <------ZmHOX2a(1)<------MYB83  <---------DEAR3(1)                <------ZmHOX2a(1) -------MYB52(1)   <---------ANAC46       --------->MYB59--------->ALFIN1   <------ZmHOX2a(1)   gtttctttgacgattttagtttcggtgaggatgacgtcgagagtttggttttggtgacggtggcggtcgaatgagcgaggagaaggaacgagaggaggtt  29244200                  <-------TEIL                 <---------MYB52(1)              <------NtERF2             ------>NtERF2                          <---------ETT(2)            <---------DEAR3(1)                  <---------AtMYB61            ------------------>SPL14      --------->ETT(2)            --------->DEAR3(1)        <---------ARR14(2)           --------->ATERF1(1)       <-------GAMYB  --------->ETT(2)          <---------ATERF1(1)       <---------MYB46(3)         ----------->HVH21         <---------ANAC46 --------->RAP2.6(2)                             <    <-----------HVH21              <---------RAP2.6(2)                                       --------   <---------ANAC46                <---------DEAR3(1)                      ----------->GT1   --------   <---------ANAC58              ------------>AtMYB77 <------NtERF2 <---------WOX13(1)     --------->CCA1(2)   <---------ANAC58           <---------ICU4<---------LBD16       --------->ATHB12       --------->CCA1(2)   tgaaggcgtgagcgacgccgttcatggtgggataatggcggttatcgacggaggtcgccatggtttagtgattgaaccggtgataagagagagataagct  29244300                                                                                                   <-                                                                                                  <--                                                                           <-------GAMYB          <--                                                                           <----------DOF2        ---                            <---------AHL20(2)                            <---------ANAC58        ---                <------MYB46(1)                                           <---------ANAC58       <---                <------MYB83--------->AHL20(2)                           <------NtERF2        -------               <---------AtMYB61                                       <---------RAP2.3(3)    <------ ---------AHL20(2)  ----------->GT1    <---------YAB1                  <---------DEAR3(1)     ------- ->ANAC58      --------->MYB59         *TSS                      <---------AHL20(2)    ----------->GT1 ->ANAC58 <---------AtMYB61 --------->AHL20(1)                 <-----------TBP     --------->CCA1(2)   atttttttggttttggtttggtttgtgaaattttttggtttctgaatgagtaaatgagaggttgtatttatagggggcgttacagagatgagtaaataaa  29244400                                                                              <---------ARR11(3)                                                                              --------->ARR11(3)                                                                            ----------->ARR10                                                                        -------->P                                                                        ------>MYB46(1)                                                                        ------>MYB83                                                                      <---------MYB55(2)                                                                      <---------MYB111(2)                                                                      --------->MYB46(3)      <---------AHL20(1)                                              --------->AtMYB61      --------->AHL20(2)                                              <---------MYB46(2)      <---------AHL20(2)                                            ------>MYB46(1)      --------->AHL20(1)                                           <---------ALFIN1  --------->AHL20(2)                                              --------->MYB46(3)  <---------AHL20(2)                                              <---------MYB59 --------->ICU4                                                  --------->TCP15(2) <---------TOE1(3) <---------YAB1                                         --------->REM1(2)XXXXXXXXXXXXXXXXXXXX>MIR2111A/B --------ICU4                                          <---------ANAC46--------->MYB55(1)     <------ -------ATHB51                                     --------->At4g35610<---------MYB59  --------->ALFIN1 -------AHL20(2)                                   <---------At4g35610<---------MYB111(1)  ---------- ------>ICU4                                      <---------DEAR3(1)------>MYB83------>ZmHOX2a(2) ------>AHL20(2)                              <---------AtMYB61  --------->DEAR3(2) <---------TOE2(3) ------AHL20(1)                             <---------ANAC58    <---------TCP20<------ZmHOX2a(2) -->AHL20(1)             <------------CBF   <---------ANAC58    --------->PCF2--------->ARR14(2) ---AHL20(2)        <------ZmHOX2a(1)       <-----------RAV1(1) <---------TCP15(1)------>ZmHOX2a(1) < -->AHL20(2)       ----------->GT1          <---------ANAC46   <---------PCF2 <---------ARR14(2) ----   ataattaataaattaagagagaggagaaattgacaaatgtgagtttgtgtggtcgctgagtagagggacccacctacctagatcctaaggtttggccttt  29244500                                                                                       <---------ARR14(2)                                                                                       --------->ARR14(2)                                                                                      ==============HOX2a_HOX2a                                                                                      ===============HOX2a_HOX2a        <---------RVE1(1)                                                             <------ZmHOX2a(1)       --------->ARR11(3)                                                           <---------TOE2(3)   <------NtERF2                    <---------ANAC58                           <-----------ARR10-----  --------->LBD16                   <---------ANAC58                         --------->LBD16   <----- <---------ANAC58             <---------AHL20(2)                            <---------ANAC58   <----- <---------ANAC58            <---------AHL20(1)                       <---------AHL20(2)       <----- <---------ANAC46     <------ZmHOX2a(1)                               --------->AHL20(1)      ------>ZmHOX2a(2) ----DOF2  <---------YAB1    --------->AHL20(1)                       --------->AHL20(2)     <------ZmHOX2a(2) >ID1  <---------ARR11(3)   <---------AHL20(2)                     --------->YAB1   <---------TOE1(3) ---------LBD16     <---------TOE1(2)   --------->AHL20(2)  ----------->GT1 <---------ANAC58--------- ------>DOF2        <---------TOE2(2)<----------DOF2   --------->CCA1(2)   <---------LBD16  <--------   aaggcgggagatttttatttcataggatatatatatttgcttttaaatactaatgcgatatgaagttaaaaataaaatgcgggtctaaggattcgatccg  29244600                             --------->YAB1        --------->TOE1(2)   <---------YAB1       <---------ANAC58   <---------ICU4       <---------ANAC58   --------->YAB1               --------->TOE2(3)       <---------ANAC46  <---------YAB1                --------->TOE1(3)     --------->ARR11(3)  --------->ICU4                <----------DOF2           <----------ID1     <---------ARR11(3)--------->YAB1            --------->ANAC46          --------->AHL20(1) ---->LBD16           --------->ICU4             <---------ANAC55(2)       --------->AHL20(2) ----ANAC46           <---------YAB1             --------->ANAC55(1)       <---------AHL20(2) ----ANAC58     --------->ZAT18           --------->ANAC58                --------->AHL20(2) ----ANAC58     <---------ZAT18           --------->ANAC46         ---------->DOF2 >ARR14(2)     ----------->GT1 <-----------GT1   --------->ANAC55(2) ----------->GT1    --------->YAB1 -ARR14(2)    <---------------AtSPL8      --------->ANAC58     ---------->DOF2 ----------->GT1   tgggcaatatcgtgggagggtactatgattatgatacctctctcactcaacacttaactttaatacaaagaaagaaaaaaattgtgacaaacatatgcat  29244700                       --------->TOE2(3)            <---------ANAC55(2)                  <---------AHL20(2)                <---------ANAC55(1)                 --------->AHL20(2)                 --------->ANAC55(2)             --------->AHL20(1)                     <---------ANAC46              <---------ICU4             --------->AHL20(2)                  <---------MYB52(1)              --------->ICU4             <---------AHL20(2)                 --------->TOE1(3)              --------->YAB1            --------->AHL20(2)                  --------->TOE2(3) <-----------GT1<---------YAB1   ---       ----------->GT1----------->GT1      <----------DOF2    --------->ICU4  <---------YAB1  -------   agttttctatggaaaaaaattatatcgtcaatagccaattcatttctttacgttaagtgttgaaatgtttactggtcttgatcataatttagctagttat  29244800  Previous    Next  AGI:  At1g77760.1    Description:  NIA1 (NITRATE REDUCTASE 1). Identical to Nitrate reductase [NADH] 1 (NIA1) [Arabidopsis Thaliana] (GB:P11832;GB:Q9CA18); similar to NIA2 (NITRATE REDUCTASE 2) [Arabidopsis thaliana] (TAIR:AT1G37130.1); similar to nitrate reductase [Brassica rapa subsp. chinensis] (GB:AAY57518.3); similar to Nitrate reductase [NADH], clone PBNBR1405 (NR) (GB:P39867); similar to Nitrate reductase [NADH], clone PBNBR1412 (NR) (GB:P39868); contains InterPro domain Nitrate reductase NADH dependant; (InterPro:IPR012137); contains InterPro domain Eukaryotic molybdopterin oxidoreductase; (InterPro:IPR008335); contains InterPro domain Flavoprotein pyridine nucleotide Range:  from: 29240697    to: 29244339    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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