Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --------ICU4 ---AHL20(1)                                                                                       <- -->AHL20(1)                                                                                       -- ---AHL20(2)             <-----------HVH21     ----------->RAV1(2)                                <-- -->AHL20(2)            --------->WOX13(1)     <---------ZAT2                               --------- --ATHB12         --------->TOE2(3)          <---------ALFIN1                           ---------->DOF2   atacttactccatgagacaacctcatcagtcaccttgtttgtgactcacacctggttatctcttgttttggctccagcgtattgatataacaaagaaagc  29187700                                                                             --------->ANAC58                                                                             --------->ANAC58                                                                             <---------MYB52(2)                                                                        --------->ANAC58                                                                  ------>ZmHOX2a(1)                                                                 --------->ANAC46                        <------NtERF2                            --------->TOE2(3)                       ----------->GT1                          ----------------->AG                      <---------ANAC46             --------->ICU4--------->TOE1(3)             --------->TOE1(3)            --------->ANAC46    --------->ARR14(2)             --------->TOE2(3)            --------->ANAC58    <---------ARR14(2)------->TEIL --------ARR14(2)    <---------LBD16      --------->ANAC58 ------->GAMYB--------->ANAC46 ------->ARR14(2)  --------->DAG2       <---------ALFIN1 -------->P     --------->ANAC58  <----------DOF2 -------CCA1(2)  ---------->DOF2     <------ZmHOX2a(1)  <-----------GT1------->GAMYB     <---------ANAC58 ->DOF2   <---------GLK1(1)   <---------ATHB12   --------->YAB1 <-----------------AGL1   <---------ANAC58   ctatcttcttggaaacctgaaaaggcggataaatcaagaggaacacaccaggcataatcaaccctatcctcaacaggccacgaacatatgggcttgaatg  29187800                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                                -----                                      --------->ARR14(2)                                        -----                                      <---------ARR14(2)                                        >>>>>                           --------->At5g28300                                                  >>>>>                        <---------ZAT14--------->MYB52(1)                                       >>>>>                        <---------At4g35610                        ------>MYB46(1)              >>>>>                  <----------DOF2--------->MYB52(1)                ------>MYB83      --------->ETT(2)         <---------GLK1(1)----------->GT1                        <---------MYB59    <--------P ------   tctccttggagaaatcggaactttggagcagtgaataacagaaacggtagtatgcaaaataccaaaaccaaactcttgggaaactggtagacataagaga  29187900         --------->LBD16       <---------LBD16       <---------At4g35610      --------->MYB52(1)     <---------WRKY38(1)     <---------WRKY12   <-----------HVH21 <---------TOE1(3) <---------TOE2(3) --->ZmHOX2a(2)           --------->TOE2(3)                                <---------WOX13(1) ----->CCA1(2)            <---------DAG2                          <------ZmHOX2a(2) ---ZmHOX2a(2)         <-----------GT1   <-------TEIL             --------->CCA1(2) -----ARR11(3)   <---------ICU4      --------->AHL20(2)          --------->AGP1 ---->ARR11(3)   --------->ATHB12 --------->YAB1                 --------->ARR11(3) ---->AGP1      --------->ICU4   --------->ICU4                  <---------ARR11(3) >>>>GATA-2     <---------YAB1   <---------YAB1                 <---------GLK1(1) >>>>GATA-4   --------->YAB1   --------->YAB1                   --------->GLK1(1)              <----- >>>>GATA-3<---------ARR14(2)  <---------ICU4            --------->HSFB2a(2)                  <------ >>>>GATA-1--------->ARR14(2) <---------YAB1             <---------HSFB2a(2)         ------->TEIL --->GLK1(1) <-------TEIL --------->TOE1(3)        ------>ZmHOX2a(2)     --------->ATHB12     <------   tctaaggtcaccggattcatgatttcaaccttatcatgataaattcgtatggatcgtttctataagagatccaagtgattgtcgatgaatctcttgtcgt  29188000       <---------SPL7                                             *TSS       --------->ZAT18                                         ---------->DOF2      <---------ANAC58                                      ------>ZmHOX2a(1)      <---------ANAC58      <----------DOF2         ------>ZmHOX2a(2) --GAMYB --------->SPL7 ---------->ID1              ===============HOX2a_HOX2a                      - ---ANAC46           ------->TEIL                 <---------ARR14(2)                              --- ---MYB46(3)        <---------AtLEC2              --------->ARR14(2)                --------->TOE2(3)   tgaagagagcgtaccattgtatgcatgtcgctttgaatcgtatcagagagtcgatcggggtcctgtaaagtatgtcttctactatacatcaaacttattc  29188100               <------MYB46(1)           --------->ARR14(2)           <---------ARR14(2)         ----------->ARR10      --------->DEAR3(1)      ----------->HVH21     <---------At4g35610     --------->At4g35610                                         <-----------------AGL1           ---     <------NtERF2               <---------TOE2(3)               <-----------------AGL2        ------     --------->ATERF1(1)       <---------AHL20(2)           <---------DEAR3(2)            --------->MYB46(3)    <---------ATERF1(1)  <---------TOE2(3)                  <------MYB83            --------->AHL20(1) -------->DAG2 ----------->GT1--------->AHL20(2)            <------MYB46(1)         <---------AHL20(1) ------->DOF2  <------MYB83  <----------DOF2      <-------TEIL--------->ARR14(2)   --------->AHL20(2)   aaaaggcagcgacgatttggttacattagggatttaatgtaatcgggctatatacattaagtcggtttctcatattgggccttaaatatatatccaccaa  29188200                                                           <---------ANAC58                                                           <---------ANAC58                                              --------->LBD16                                             --------->HSFB2a(2)                       <----------ID1                              --------->LBD16<---------HSFB2a(2)         <---------AHL20(2)                              <------NtERF2 <---------LBD16<---------ANAC46       <-------GAMYB   --- ------>YAB1                  ----------->HVH21     ---------->DOF2      --------->AHL20(2)       <-- --->WOX13(1)      <----------DOF2          <---------ANAC46            --------->AHL20(2)      -----   ttacaaacatttgaagaaaaacttttatgggccggacatatttgtttctgggaaaaaagaggcgttgtaagaaaattaatagtctgttaacaacaaataa  29188300                                                               ------->PIF5                                                               <-------PIF4                                                               <-------MYC4                                                               ------->MYC4                                                               <-------MYC3                                                               <-------PIF5                                                               <-------MYC2                                                               ------->MYC3                                                               ------->MYC2                                                               ------->PIF4                                                              ================bZIP_DOF                                                              ===========================MYC_MYB                                                              --------->ANAC55(2)                                                              <---------ANAC55(2)                                                              <---------O2                                                              --------->O2           <-------TEIL                                       <---------TGA1a         <---------GLK1(2)          ---------->DOF2           <---------ANAC58         --------->ARR14(2)         ====================================bZIP_DOF         <---------ARR14(2)    <---------YAB1                 --------->TGA1a    --------->MYB52(1)         ----------->GT1                <---------ANAC58 <---------ANAC55(2)           --------->ICU4                ------------>OsbHLH66          --------- --------->ANAC55(2)         <---------ICU4              <---------At4g35610                <-------- ------>ARR11(3)             --------->YAB1              --------->At4g35610     ------->GAMYB  ----- -------ARR11(3)            <---------ATHB51      <---------TOE2(3)           <-----------GT1   ----- ------>ARR10  <----------DOF2<---------TOE2(3)   <---------TOE1(3)<----------DOF2 <---------GLK1(2)   gatacttaacagattcactttaaacaaacaataatgtttaaagtgaatttctaaggttaagctcacgtgctttgttgatttaacagactctcttacagaa  29188400     <<<<<<<<<MYB98       <----------DOF2                              --------->YAB1  <---------ARR11(3)     <---------ANAC58                             <---------YAB1 >HSFB2a(2)              <---------ANAC58                      <-----------GT1                     <- -HSFB2a(2)       <----------DOF2                          <---------AHL20(2)                   ----- ---->ANAC58<---------ANAC58                           --------->AHL20(2)<---------YAB1        <----- ---->ANAC58<---------ANAC58             <---------ANAC46  --------->AHL20(2)         --------->ICU4   gcaatatgttacttaggtgtcttttttgcttttgacttatattctgtgtttcattgtttatatatatactgtattataaaactatgtaatacttgaagat  29188500           ----------->GT1                  <---------WOX13(1)                        <----------DOF2    ------>NtERF2                         <---------ICU4                         <---------MYB52(1)   --------->ZAT18                       --------->ICU4                        <---------DEAR3(2)  --------->ATERF1(1)               ----------->GT1                            <------MYB46(1)  <---------ANAC58                 --------->DAG2                         --------->DAG2  <---------ANAC58               ---------->DOF2                         ---------->DOF2 --------->At4g35610       ====================================================MADS_MADS            < -----ZmHOX2a(1)           ----------------->AGL2              <---------------AGL15 <---------ANAC58 ---->CCA1(2)              ----------------->AGL3              --------------->AGL15 <---------ANAC58 ----ARR14(2)          <---------------AtSPL8              ----------->HVH21   <------MYB83<---------YAB1   aggagcgggccgattgaaaaatgaaatggtccataaaaaggtagtaattgccaaactcgaggtgacaaaaaatagaaaagtcggtttgcttttatttttg  29188600  Previous    Next  AGI:  At1g77655.1    Description:  unknown protein Range:  from: 29187502    to: 29188066    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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