Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          ---------->DOF2      --------->ANAC58                                                 ==========================HOX2a_HOX2a     --------->ANAC46                            <------ZmHOX2a(1)           --------->ANAC58    --------->LBD16                            <---------TOE1(3)            --------->LBD16   --------->ANAC46                            <---------TOE2(3)          --------->TOE2(2)  --------------->AtSPL3                    <---------MYB52(1)            --------->TOE1(2) -------->ARR14(2)                       --------------->AGL15      <------ZmHOX2a(2)              -- ---------ARR14(2)                      <-----------------AGL1     --------->ARR11(3)        -------- ---->DOF2                              <-----------------AG       <---------ARR11(3)       --------- -->RAV1(1)                    <---------WRKY38(1)   ------------------------>ANAC81<-----------HVH21   agtatccgcaccaattcaaaatccagacataagtcaacacaatcccgttaaggaaaatcaaagaaacaagatcaaacccacgaatgggtcactgaaaagt  29121800                                                                   --------->LBD16                                                                  --------->LBD16 --------->MYB52(1)                                                                 --------->HSFB2a(2)                                                                 <---------LBD16 --------->ANAC46                                                         <-------TEIL----------->HVH21 --------->ALFIN1                                                        --------->CCA1(2)        ----------->HVH21                                             -------->P<---------ARR14(2)  <------ZmHOX2a(1) ------->YAB1                      >>>>>>>>>SARD1      --------->ARR14(2) --------->ANAC58 --------->At4g35610 ->DAG2                            >>>>>>>>>CBP60g    <------ZmHOX2a(1)   --------->ANAC58 <---------At4g35610 ->DOF2                ---------->DOF2     <---------MYB111(1)   <---------HSFB2a(2)<---------DEAR3(1)   agcataaaacagagaaattgaaacaaaaagatgcgaaatttggcacttacccaagaggatacacattcccggagacaggaaacacgacggtggagctaag  29121900                                 <----------DOF2                           <---------TGA1a                           <---------O2                           --------->O2                           =================bZIP_DOF                           --------->TGA1a                           =================bZIP_DOF                          <------NtERF2                         ------>NtERF2  --------->At4g35610                        --------->RAP2.3(3)                        ----------->HVH21                        --------->DEAR3(1)                       --------->DEAR3(2)    --------->GLK1(2)  --------->ATERF1(1)                     <---------ZAT14   <---------GLK1(2)  --------->At4g35610                    <---------ZAT2   <---------ARR14(2) <---------At4g35610             ---------->DOF2<------ZmHOX2a(1)           >>>>   tcgacgattctgtaacttcacttgagccgacgagtctttagtagcttcagaggtttgaaagcgagcacagaggatgaagacatagaagacgaagacgaag  29122000                                                            --------->ANAC58                                                            --------->ANAC58                                               <---------DAG2                                   --------->YAB1        <------NtERF2                                  <-------TEIL <----------DOF2                                --------->ARR14(2)      --------->ANAC58             ---------->DOF2                      <---------At4g35610    ------>ZmHOX2a(1)---------->DOF2     --------->AtMYB61      <---------TOE2(3)     <---------LBD16 <-----------------AGL1         --------->ARR14(2)      <---------TOE1(3) <----------DOF2     <-----------------AGL3         <---------ARR14(2)    ---------->DOF2<---------At4g35610<---------ICU4    --------->ANAC58  ------>MYB83 <---------TOE2(3) >>>>>TBF1      <----------DOF2 <---------ARR14(2)      <------NtERF2     ------>MYB46(1)     <------   aagaagtaaaggtttcttctttgctgcttattcggattcatcatctcctctttttggcccccaagaaagcgaaaccaaatcccaccaaaaaggtttcttt  29122100                                                                                             --------                                                                                             --------                                                        ==================================HOX2a_HOX2a                        <----------DOF2     --------->At4g35610        --------->AHL20(2)  --------->ZAT6                --------->DAG2              --------->ZAT2      <---------ARR14(2) ------>ZmHOX2a(2)               ---------->DOF2              <---------At4g35610 --------->ARR14(2)--------->GLK1(1) ----DOF2 ----------->RAV1(1) <----------DOF2           <------ZmHOX2a(1)  <---------CCA1(2) --------   tttgacacagggcaacaaaaaggaggctttttctttgtagaattgctgctcccttataggagtgagtatttgtttatatatctgatctctctcacactca  29122200                                             <------------CBF                                          --------------->AGL15                                          <---------------AGL15                                        --------->At4g35610                                        ----------->GT1                                       --------->ANAC58                                       --------->ANAC58                                      --------->SPL7              <---------At4g35610    <---------MYB52(1)                                         <----              <---------ZAT2       --------->ANAC55(2)                                   ------->GAMYB <---------ANAC58                  --------->ANAC46                                   --------->MYB52(1) <---------ANAC58                 <---------LBD16                                  --------->ANAC46 <---------ANAC46        <----------DOF2<---------At4g35610                       ------->GAMYB <---- ->ANAC58     --------->ZAT2  <---------GLK1(1)                                  --------->DEAR3(1)-- ->ANAC58     --------->At4g35610 <---------HSFB2a(2)                    <---------GLK1(2)      ----- ->ANAC46    ----------->RAV1(1)*TSS--------->LBD16                  ---------->DOF2  <---------ALFIN1   atttcgtgcaacttgcagcagaggtttctttgagttcccgtaagctaaattgagaaacttggcatttggctaaaagaaactcaacgcccaacgctcacta  29122300                           =============================HOX2a_HOX2a                      ------>MYB83                      ------>MYB46(1)                   <------NtERF2                  ------>NtERF2                 --------->ANAC46                 --------->ANAC58                 --------->ANAC58                <-------PIF5                ------->PIF5                ------->MYC3                <-------MYC3                <-------MYC2                <-------PIF4                ------->PIF4 <---------WOX13(1)   ------>ZmHOX2a(2)                ------->MYC2<------------CBF     <------ZmHOX2a(2)         ---------->DOF2   <------ZmHOX2a(1)    <---------ARR14(2)       --------->REM1(2)   ==============================HOX2a_HOX2a    <---------ANAC46  -------->P                --------->ARR14(2)    <---------ANAC58 ------>NtERF2              <---------ARR11(3)      <---------ARR14(2)    <---------ANAC58--------->DEAR3(1)          --------->ARR11(3)      --------->ARR14(2) -----ZAT18    --------->ANAC46                ------->GAMYB            <---------ARR11(3) -----ZAT14    --------->ANAC58             --------->MYB52(1)     ------------>CBF ------->ANAC46<---------ATERF1(1)        <---------MYB59        <---------ZAT18 ---->ZAT14    --------->ANAC58     ---------->DOF2              --------->PCF2------>NtERF2   cacttagcgtgtaaagcacgcgccaaccaggattgactcaaaggcctaacgatcttcaaatgtacagggcccaatatactcggcccataaactctaaaac  29122400                         ----------->RAV1(2)                         <---------At4g35610                      <-------TEIL                     --------->DOF5.7(2)                                    ----------->HVH21                   <---------ANAC58                                       <---------ANAC58                   <---------ANAC58                                       <---------ANAC58                   <---------ANAC46                                       <------MYB46(1)                ----------->HVH21                                         <------MYB83              <------NtERF2                     --------->YAB1           --------->MYB55(2)              --------->ANAC55(2)               <---------ICU4           <---------MYB46(3)     =====              <---------ANAC58                 <---------ATHB12         --------->ALFIN1       <-----              <---------ANAC58      *TSS       --------->ICU4        --------->ATHB12          ======              <---------TGA1a       --------->ZAT2         --------->ARR11(3)                 -------              --------->TGA1a       <---------ZAT2<---------YAB1    <---------YAB1            <------              <---------ANAC55(2)   <---------At4g35610    --------->ARR14(2)             <------ZmHOX2a(2)             ------>NtERF2          --------->At4g35610    <---------ARR14(2)            --------->AGP1         --------->MYB46(2)       <-----------RAV1(2)      <---------ARR11(3)<---------ATERF1(1)-----   tattcaaatgttaggcgcgtgacgttcacctgtgaatcagctgatagaaatcattatccaatatccagttatgagtgggtgactccaaatagatccaact  29122500                                                                                                    <                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                  ---                <-------MYC3                                                                      ---                <-------MYC2                                                                      ---                ------->MYC4                                                                      ---                <-------MYC4                                                                      ---                ------->MYC2                                             ----------->HVH21        ---                -------->ABF1                                          <---------ANAC58           <--                ------->MYC3                                           <---------TGA1a            <--               <---------ANAC55(2)                                     <---------ANAC58           ---               --------->ANAC55(2)                                     <---------ANAC55(2)       ----               <--------ABF1                                           --------->ANAC55(2)       ----               =================bZIP_DOF                              <-------TEIL               ----       --------->ATHB12                                           <------NtERF2                  ----       -------->ATHB1                                            ------>NtERF2                   ----       --------->ATHB51                                         ------------------>SPL14         ----      <---------YAB1                                      --------->ARR14(2)                     ----  --------->ANAC58                                    --------->LBD16 ------->TEIL              <----  --------->ANAC58   <----------DOF2                  ------>NtERF2 <---------SPL7              ----- ========================MYC_MYB             --------->ARR14(2) <---------ALFIN1                ----- -------AtMYB77<---------O2                  <---------ARR14(2) --------->DEAR3(1)              ----- ========================MYC_MYB          <---------ANAC46<---------MYB52(1)                    <---- -->ZAT2       --------->O2             --------->LBD16   <---------ARR14(2)                    ----- ---ZAT2       <---------TGA1a          ------>NtERF2--------->DEAR3(1)--------->TGA1a         ------ -->GAMYB      --------->TGA1a        <---------LBD16--------->ANAC46 --------->SPL7           ------   ggcaacgcattattgacacgtgtcttttcatttctcttcttccggcgttttctctccgccgtttcgccaccgtacgtgacaatgtctgtttctctctccg  29122600                                                 <---------ALFIN1                                                <------NtERF2                                                ----------->HVH21 ------NtERF2                                   <---------MYB52(1) ------->ABI4(1)                               <---------ATERF1(1) ---->NtERF2                                   <-----------HVH21 --------ATERF1(1)                             ------>NtERF2 ------>DREB2C(2)                              <-----------TGA1 ------>RAP2.3(3)                             --------->ATERF1(2) ------>RRTF1(2)                              --------->RAP2.3(2) ------>DEAR3(1)                              --------->ANAC46 ------>RAP2.3(2)                             --------->O2 ------>RAP2.6(2)                             --------->bZIP60(1) ------>ATERF1(2)                             --------->DEAR3(1) -------ATERF1(2)                             --------->RRTF1(3) -------ALFIN1                                --------->RRTF1(2) ------>RRTF1(3)                              --------->RAP2.3(3) ----->RAP2.3(1)                              <---------ATERF1(2) ----->RAP2.6(1)                              --------->RAP2.6(2) ----->ATERF1(1)                             --------->ERF1 ----->DEAR4(2)                              --------->RRTF1(1) ----->RRTF1(1)                              <------NtERF2 ----->ERF1                                 ------>NtERF2                 <-------GAMYB ----->ORA47(2)                             <---------ATERF1(1)          <---------MYB46(3) -----At4g35610                             --------->LBD16              <---------ANAC58 ---->At4g35610                            --------->DEAR3(1)            <---------ANAC58 ---->ABI4(1)                              <---------ALFIN1            <-----------HVH21 ---->LBD16                         <----------DOF2                 ----------->RAV1(2) -----ATERF1(1)             <---------GLK1(2)--------->RAP2.3(1)<-----------HVH21 ->NtERF2              ----------->RAV1(1) --------->ANAC46    --------->TOE1(1)             -------- --->ANAC46           <---------ALFIN1    <---------LBD16      --------->TOE2(1)         ------>ZmHOX2a(1) --->DEAR3(1)       ------>ZmHOX2a(1)     --------->MYB46(3)  ------>ZmHOX2a(1)  <----------DOF2   <-   ccgcctctcacttactctgttcctccaccagagtctctctttcccccgccgtcacctcttcgtcctcgtcccctgtcgttgctctttcttcctctacatc  29122700  Previous    Next  AGI:  At1g77480.1    Description:  nucellin protein, putative. similar to nucellin protein, putative [Arabidopsis thaliana] (TAIR:AT1G44130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61887.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 29119452    to: 29122232    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g77490.1    Description:  TAPX; L-ascorbate peroxidase. Identical to L-ascorbate peroxidase T, chloroplast precursor (APXT) [Arabidopsis Thaliana] (GB:Q42593;GB:Q9CAQ6); similar to SAPX, L-ascorbate peroxidase [Arabidopsis thaliana] (TAIR:AT4G08390.2); similar to SAPX, L-ascorbate peroxidase [Arabidopsis thaliana] (TAIR:AT4G08390.1); similar to thylakoid-bound ascorbate peroxidase [Brassica oleracea] (GB:BAD14931.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Plant ascorbate peroxidase; (InterPro:IPR002207); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016) Range:  from: 29122436    to: 29125109    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version