Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------ARR11(3)         --------->ARR11(3)  ------>ZmHOX2a(2) <------ZmHOX2a(2) ---------ARR11(3) ---------GLK1(2) -------->AGP1 -------->ARR11(3)          <---------ZAT6                ---------->DOF2 ---------ARR14(2)        <---------ANAC46          <------NtERF2                        ---------->DOF2 -------->ARR14(2)        <---------ANAC58      --------->ANAC58                 <-------TEIL   <---- ---->HVH21               <---------ANAC58      --------->ANAC58         <------ZmHOX2a(1)--------->DAG2   cagatccttgaaatcttgtgttctatttgagtgttattttgtcaatggacaggcccggtctaaagcacagacagaggaaaccgtacatatgaaaagttgc  29100700           --------->LBD16      <---------GLK1(1)                          --------->CCA1(2)      --------->ZAT2                 <---------AHL20(2)      <---------ZAT2                 <-----------GT1  ------>MYB46(1)      --------->GLK1(1)          --------->AHL20(2)   ------>MYB83      <---------At4g35610      --------->ANAC58 --------->ARR11(3)     ----------->GT1      --------->At4g35610      --------->ANAC58 <---------ARR11(3)     <---------ANAC58            --    <------ZmHOX2a(1)          ----------->GT1  <---------ARR14(2)     <---------ANAC58            -- <-----------RAV1(2)   <---------ZAT18          --------->ARR14(2)   <---------ANAC46              -- -----AtLEC2           --------->ZAT14      --------->LBD16------->TEIL<---------ANAC46<---------MYB52(1)   atagcaggagctccgaaaaactctgtgaacaccaagtaattacttccgaagataccaaatgtaccatggttttgggtgaaaacaagaccggtatgcattg  29100800              <---------MYB52(2)             <---------At4g35610                                            <---------ALFIN1             <---------ZAT2                                               <-----------HVH21             --------->At4g35610                                        --------->MYB46(3)             --------->ZAT2         <---------ANAC58                  ------>MYB46(1)         --------->ANAC46           <---------ANAC58                <---------MYB59      --------->ZAT14               <---------ANAC46                <---------MYB52(2)      <---------ZAT14        <---------ARR14(2)                     <---------MYB46(2)      <---------ZAT18        --------->ARR14(2)                    --------------->AtSPL3 ------->ANAC58          <---------At4g35610        <---------MYB52(1)------>MYB83 ------->ANAC46       <---------ZAT14   ----------->HVH21         ------->TEIL ------->ANAC58       --------->ZAT14 --------->ALFIN1        <---------------AtSPL3   cacgacaatgcactcagctaacattgcagcgaataggggcgtgtgaacgagtcccttggtgaaccatgtaccgaaccatcacttctaataccatgagcag  29100900                   <------NtERF2                  ----------->RAV1(1)                  ------>NtERF2                 ----------->HVH21                 --------->ETT(2)                --------->RAP2.3(1)                --------->ATERF1(1)                <------NtERF2               <---------RAP2.3(1)               <---------ERF1------>MYB83               <---------ATERF1(1)              --------->ETT(1)              <---------DREB2C(2)              <---------DEAR3(1)              <---------At1g77200                      --------->ZAT18              <---------RAP2.3(3)                      <---------ZAT14              <---------DEAR4(1)                    --------->RAP2.6(3)     <----------DOF2             --------->DDF1  ------>MYB46(1)   <---------ARR14(2)        <---------ALFIN1       <----             --------->RAP2.6(3)               --------->ARR14(2)       <---------ALFIN1--------->ANAC58           <-----------RAV1(1)        <---------ZAT6<---------ANAC58   --------->LBD16  --------->ANAC58         <---------ICU4    <---------MYB59    <------ZmHOX2a(1)    --------->ARR14(2)--------->AtMYB61     <---------ZAT18      ----------------->AGL1    <---------ANAC58  --------->ANAC46---------->DOF2   gtcgcagtgcataatgtcggcgacagtgaccaaataagtagagtttgaggacatgcctgcacaaaaacgtttccccaacttttatgaccaaagcaaaatt  29101000                                                                   --------->YAB1                                                                   --------->AHL20(2)                                                                  <---------ATHB12             ----------->GT1         ---------->DOF2              <---------ATHB51            --------->DAG2  ----------->GT1              ---------->DOF2              --------->YAB1           ---------->DOF2  --------->ANAC58         --------->At4g35610         <---------ATHB12     ----------->GT1        --------->ANAC58  ---------->DOF2 ------------>CBF   ------------>CBF -----AHL20(2)   ---------->DOF2--------->AHL20(2)   <---------At4g35610    ------>NtERF2        ----   tatctcgtagtaaaaaagtaaaagcagagcaagaaaaaataaagacataaaagtcatctgaaagcccaataatatcgaggcccatcaataagaaccaaaa  29101100                                              --------->ATHB51                                              --------->YAB1                                              <---------ICU4                                    <----                                              -------->HAHB4                                    -----                             *TSS             <--------ATHB1                                 --------       <------------CBF    --------->ANAC58  --------->ICU4                                 ---------     --------->AHL20(2)    --------->ANAC58  <---------ATHB51                              <---------HSFB2a(2)     <---------AHL20(2)    --------->ANAC46  <---------AHL20(2)                    <------ZmHOX2a(1)  --------->AHL20(2) <---------ANAC58        <---------YAB1                    <---------MYB52(1) --------->AHL20(2)  <---------ANAC58      --------->YAB1           <---------GLK1(1)      --------->HSFB2a(2) ----->AHL20(2)      <---------ANAC46   <----------DOF2             --------->GLK1(1)     <---------LBD16   aaaataaaaaattgtctagagtttcgtccaagccatcgtcgactttaataattgttcttctcttgctcagatttcttctccgataggaaaactcccgaag  29101200                                        <---------ANAC58                                        <---------ANAC58                                       --------->MYB52(2)                               <--------P                     ----------------->AGL1                                                 <--------            --------->TOE1(3) <---------MYB52(1)                                          --------->ATHB12 -----HSFC1(2)       <-----------------AGL1                                         --------->ANAC46 ---->HSFC1(2)       ----------------->AG                <-----------GT1           <---------LBD16 ->LBD16    --------->TOE2(3)<---------DEAR3(2)     <----------DOF2          <---------MYB46(3) >LBD16 --------->ZAT14    --------->DDF1       --------->ARR14(2)    <----------DOF2    --------->ICU4   cttcactcagtaaaccctaattttccgatgtcggtaagtgttccttgccgaattctttttttcaatttctaacttttgtttgttctgcgcaaagattgat  29101300                                                    <---------ZAT14         <---------TOE2(3)                                                <---------HSFB2a(2)         <---------YAB1                                                --------->HSFB2a(2)    <---------TOE1(2)                                            ------>ZmHOX2a(2)      <------NtERF2                                           <------ZmHOX2a(2)      <---------RAP2.6(3)                                          <---------GLK1(2)       ------>NtERF2                                          <---------ARR11(3)      <-----------HVH21                                          <---------ARR14(2)     --------->bZIP60(1)                                          --------->ARR11(3)     <---------ANAC58                                          <---------ARR14(3)     <---------bZIP60(1)                                          --------->ARR14(3)     <---------ANAC46           <--------                       <---------ETT(2)   --------->AGP1         --------->DEAR3(1)  ----------->ARR10                       <---------ZAT18    --------->ARR14(2)     <---------ANAC58<------MYB83              --------->AHL20(2)          <-----------ARR10    <---------ZAT18   <------MYB46(1) -WOX13(1) ----------->GT1               <---------CCA1(2)     --------->ZAT18 <--------P   <--------   agtatgaattgaacgataaaatcggtggacattgtggtgattcagatcttcgagtacaatggaagtgccgtcgtagctatggtagggaagaattgcttcg  29101400                                                                             --------->YAB1                                                                            <------ZmHOX2a(2)                                                                           <---------ARR11(3)      <-                      <---------ANAC58                               --------->CCA1(2)            ---                      <---------ANAC58                               <------ZmHOX2a(2)       <-------                    <------MYB83                                    --------->ARR11(3)      ---------                    <------MYB46(1)                                 <---------ARR14(2)      <--------                 <---------ANAC58                                   --------->ARR14(2)  --------->TOE1(1)                 <---------ANAC58    --------->ATHB12               --------->AGP1     <---------At4g35610       <---------ZAT6 <---------ANAC46                       <---------ARR11(3)        --------->At4g35610 -ANAC58         <---------ANAC46 --------->ANAC46           --------->ARR11(3)<---------CCA1(2)<---- -ANAC58   ------>ZmHOX2a(2)  --------->YAB1    <---------GLK1(2)   <---------ARR11(3)---------------   ctatagctagtgatcggaggcttggtgtgcaattacaaaccattgctaccgattttcagagaatatctaagatccacgatcatctcttcatcggactttc  29101500       ------>NtERF2      --------->DEAR3(1)      <---------ALFIN1   --------->ANAC46   --------->ANAC58   --------->ANAC58 ----------HVH21                           <-----------GT1 ------>LBD16                       --------->ARR14(2) ---DOF2<------NtERF2               <---------ARR14(2) >HSFB2a(1)                      <---------ANAC46 -HSFB2a(1)                  --------->ARR11(3)       ------>ZmHOX2a(1)                      <------- -----LBD16                 <---------At4g35610      --------->TOE2(3)                      <-------- ------>WRI1                --------->At4g35610  <----------DOF2  <---------TOE2(3)       <------NtERF2   cggtctcgccaccgatgtccagacattgtaagctctcgtatatgtttactcctttcctcagagaattttaggtgaattacaaaatttagggctccgtttt  29101600  Previous    Next  AGI:  At1g77420.1    Description:  hydrolase, alpha/beta fold family protein. similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT5G16120.1); similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT5G16120.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO42147.1); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073) Range:  from: 29098393    to: 29100610    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g77440.1    Description:  PBC2 (20S proteasome beta subunit C 2); peptidase. Identical to Proteasome subunit beta type-3-B (PBC2) [Arabidopsis Thaliana] (GB:O81153;GB:Q9CAR1;GB:Q9SRH0); similar to PBC1 (20S proteasome beta subunit C1), peptidase [Arabidopsis thaliana] (TAIR:AT1G21720.1); similar to Proteasome subunit beta type-3 (20S proteasome alpha subunit C) (20S proteasome subunit beta-3) (GB:O65084); contains InterPro domain Proteasome, beta-type subunit, conserved site (InterPro:IPR016050); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR001353) Range:  from: 29101129    to: 29103287    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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