Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------ZAT14                                                           --------->ZAT18                                                           <---------ZAT18                                                  --------->DEAR3(1)                                                 --------->RAP2.3(1)                                                 <------NtERF2                                                 --------->ORA47(2)                                                 --------->ATERF1(1)                                                <---------ATERF1(1)                                                --------->LBD16                                                <---------At4g35610                                                --------->At4g35610             <---------DEAR3(1)                                                ------>NtERF2           ----------->HVH21                                               --------->ATERF1(2)     ------->MYC3                                               --------->RAP2.3(2)     <-------MYC3                                              --------->RAP2.3(1)     --------->ANAC46                                              --------->DEAR3(2)      --------->ANAC55(2)                                             ------>MYB46(1)          <---------O2              <----                                             <---------ATERF1(1)      <---------ANAC55(2)      ------                                             ------>MYB83  --------->ZAT14 <---------WOX13(1)  ------                                          ----------->RAV1(2)<---------At4g35610------>ZmHOX2a(2)                               <---------ANAC55(2)--------->DREB2C(2) <---------TGA1a         <------                               <---------ANAC58--------->RAP2.6(2)    --------->TGA1a         -------                               <---------ANAC46<---------ATERF1(2)  <-----------GT1  <------NtERF2                               <---------ANAC58--------->DEAR3(1)   <-------------DYT1       <------- ->ZmHOX2a(1)   --------->RAP2.6(3)      =======================================MYC_MYB <---------ARR14(2) ---GT1        --------->MYB52(1)        -------->P------>NtERF2    ------------->DYT1  --------->ARR14(2) --GT1         <-----------GT1 --------->ANAC55(2)--------->RAP2.3(3) --------->O2  ------>NtERF2   ctctctctctctactcttaacggctcatgtgtttcgtattagcaacctgccgccgacttagtgtgctaattcacgtgactgatcggcgcgatttcgccgg  29097800                             <---------ANAC55(2)                             --------->ANAC46                             --------->ANAC55(2)                        --------->TGA1a                        --------->O2                        --------->bZIP60(2)                        <---------bZIP60(1)                        --------->bZIP60(1)                        <---------O2                       <------NtERF2                 ------>ZmHOX2a(2)                      ------>NtERF2   <---------HSFB2a(2)                     <---------DEAR3(1)   --------->CCA1(2)                                   -------                     --------->DEAR3(1)  <---------ARR11(3)                           <---------At4g35610                     ----------->HVH21--------->HSFB2a(2)                             --------->At4g35610                    --------->ATERF1(1)  --------->ARR11(3)                           <---------ZAT2                   --------->LBD16    --------------->AGL15                           <---------ZAT14                   ------>NtERF2      --------->HSFC1(1)    --------->MYB52(1)       --------->ALFIN1 --NtERF2         <---------LBD16<---------HSFC1(2)  ====================================HOX2a_HOX2a >NtERF2         <---------LBD16 <---------HSFB2a(1) <---------DEAR3(1)           <------ZmHOX2a(1) --->LBD16  <---------AHL20(2)   --------->HSFB2a(1)<------ZmHOX2a(2)       <---------ANAC55(2) ---LBD16   --------->AHL20(2)   --------->HSFC1(2) =====================================HOX2a_HOX2a -->LBD16  --------->AHL20(2)--------->ANAC58      <---------ARR14(2)       ----------->RAV1(2) <---- --LBD16   <---------AHL20(2)--------->ANAC58      --------->ARR14(2)     <-----------GT1 <---------ANAC46   gaaattgcagaaattaaattccggcgacgttacgaaacttctagatatagacggatcggtgagaacggagagagaattacctgaggagtgctgcgagtat  29097900                                                                           <---------bZIP60(2)                                                                           <---------bZIP60(1)                                                                           --------->bZIP60(1)                                                                           --------->O2                                                                           <---------O2                                                                           --------->TGA1a    -------                                   <------NtERF2                  <---------ANAC46            -------                      ------>ZmHOX2a(2)                           <---------ANAC58            -------                     <------ZmHOX2a(2)                            --------->ANAC55(2)        --------                    <---------ARR11(3)                            <---------YAB1  ------>NtERF2                    <-----------ARR10                             <---------ANAC58--------->LBD16                    --------->ARR14(2)                            <---------ANAC55(1)        <-------                    --------->ARR11(3)                            <---------ANAC55(2)   --------->YAB1                    <---------ARR14(2)                      <---------TOE2(2)    --------->ANAC46                   <------ZmHOX2a(1)                        <---------TOE1(2)    <---------ETT(1)               ---------->DOF2    <-----------HVH21      <---------ANAC46  --------->bZIP60(2)-------           <------NtERF2          ------>NtERF2   ----------->HVH21        <---------TGA1a  <--------          --------->LBD16        --------->DEAR3(1)  --------->DEAR3(2)    ========================== -->YAB1<---------LBD16   <---------YAB1--------->YAB1 <-----------HVH21   ========================== -----YAB1----------->GT1<---------TOE1(2)   --------->At4g35610<-----------GT1 <---------LBD16   aatggattgagccggagaaaaggatcttatgttcgccgtcgatgatcagcgagcgaccgtcgtatgttacgtttgcgacgtctccggcaactataaccgc  29098000                                                                      <---------HSFB2a(2)                                                                   --------->GLK1(2)                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)                                                                  <---------GLK1(2) >GAMYB                                                           <---------ARR11(3) -->RAP2.6(2)                                            <---------ANAC58 -->ANAC46                                               <---------TGA1a ->MYB46(3)                 ---------->DOF2              <---------ANAC46 -----AtMYB77               =======================================bZIP_DOF -->DEAR3(1)         <---------ZAT14                     <---------ANAC58 -At5g28300        <---------------AtSPL8               <---------TOE2(3) =====MYC_MYB      <---------------AtSPL3             ----------->HVH21         <---------YAB1 =MYC_MYB         <---------ANAC46<-----------HVH21   ----------->TGA1--------->HSFB2a(2)         ---   catgagaacgagaaaaactagcgagtactgaaaagtcgtcatttcttatgtaaacactgacgtttgaagattctagagagtttttatagtttgggactat  29098100                  ------->TEIL                                                          <-----------TBP             <---------ANAC46                             *TSS                      --------->LBD16           --------->ZAT14                             --------->AHL20(2)           ----------->GT1           <---------ZAT14      <---------HSFB2a(2) --------->YAB1                <---------LBD16     --------->MYB52(1)         --------->HSFB2a(2)<---------ATHB12             <---------ARR14(2)    ------->GAMYB <-----------ARR10              --------->WOX13(1)        --------->TOE2(3)   <XXXXX   <---------MYB52(2)   --------->MYB46(3)     --------->MYB46(3)      <---------AHL20(2)     <------ ------>ANAC46   <---------CCA1(2)         ----------->HVH21     <----------DOF2--------->ARR14(2)---   gcacaactaactgtgcagtgtatctcaccatcgtctcgaatttatgcgacccaatcataaatttcttctttattttttcttaaatccggtttatatatga  29098200                    ----------->GT1                   --------->DAG2                            --------->YAB1                  ---------->DOF2              ----------->GT1               --------->YAB1       <---------ANAC58         <--------ATHB1               --------->AHL20(2)   <---------ANAC58    ------------>CBF   <---------ATHB12  --------              <---------ATHB51      <----------ID1      =============================================       <------------CBF             ----------->GT1---------->DOF2    ------>NtERF2<---------LBD16 XXXXXXXXXXXXXXXMIR841B*---------->DOF2       --------->DAG2<---------ATHB51     --------->GLK1(2) ---YAB1  ------------>CBF          <---------ANAC46    ----------------->AGL3  --------->YAB1 --------->CBF--------->ICU4 ------------>CBF---------->DOF2<---------ATHB12   <---------ATHB12     <   ttcaatggaaattgcaattataaagtaaaagcccaatagcgtcaaaaaaaagtaaaagcccaataatagtgaggcccatcaataatctggagtcaaacaa  29098300                                                                                                -----                                                                                               <-----                                           <-------GAMYB                                     *TSS  <-                                          ----------->GT1                                <---------ANAC46                                        <---------LBD16                                  <---------bZIP60(2)                                      <-----------GT1                    ------------>CBF<---------O2                                --------->LBD16                       <-----------HVH21  --------->O2           <---------GLK1(1)  <---------LBD16                      <---------ANAC58    <---------DOF5.7(2) <---------MYB46(3)         --------->ARR14(2)            <---------WRKY18(1)         ----------->HVH21 ---->CBF  --------->GLK1(1)<---------ARR14(2) <---------YAB1      <---------ANAC58   --------->WRKY12 =========================================MADS_MADS      ----------->HVH21      --------->MYB52(1)<-- ---------ANAC46        ----------------->AG   ----------->TBP     <---------ANAC46<---------MYB46(3)   tggtggataatggaaatctctcaaaatccaaatccggttttagccggttataaatgggtttgactggtttcgggtcacaatcgaacggttgacgtcgatc  29098400                                                          ------->MYC2                                                          <-------MYC2                                                          <-------MYC3                                                          ------->PIF4                                                          ------->MYC4                                                          ------->MYC3                                                          <-------PIF4                                                          <-------PIF5                                                          ------->PIF5                                                          <-------MYC4                                                         ==========================================bZIP_DOF                                                         --------->ANAC58                                                         --------->ANAC55(2)                                                         <---------TGA1a                                                         --------->ANAC58                                                         --------->O2                                                 <-------PIF4                                                 ------->MYC4                                                 <-------MYC3                                                 ------->MYC3         <-------GAMYB                           <-------MYC4        --------->MYB111(2)                      ------->PIF4                  --------->ARR11(3)        <---------MYB46(3)                       <-------PIF5    --------->HSFB2a(1)        --------->MYB111(1)             <------NtERF2    <---------O2          <---------ARR11(3)        --------->MYB55(2)         <---------DEAR3(1)    --------->TGA1a--------->LBD16        --------->MYB52(2)      <---------DEAR3(1)<-----------RAV1(1)  --------->ANAC46       <--------P              <------NtERF2     ------->PIF5    <---------HSFB2a(1)      <---------MYB52(1)     <---------DEAR3(1)  <-------MYC2    <---------HSFC1(2)    <---------HSFB2a(2)     <------NtERF2        ------->MYC2    --------->HSFC1(2)           -------    --------->HSFB2a(2)   <---------DEAR3(1)    --------->ANAC55(2)    --------->LBD16     ---------- ---->YAB1               <------NtERF2<---------DEAR3(1) --------->ANAC46      --------->GLK1(2) -ZmHOX2a(2)          ---------->ID1 <------NtERF2--------->ALFIN1    <---------LBD16   <----------DOF2 --------ICU4     =================================================bZIP_DOF    <-----------ARR10 -------YAB1      <----------DOF2 <------NtERF2 <---------ANAC55(2) <-----------GT1<-----------GT1   atcattctggtagttgaaaactttgtcgtcgtcgtcgtcgtcgtcgtagcacgtgttgcacgtgagaaatttcccgcacaaaatcttactcttttcgtct  29098500                       --------->HSFB2a(2)      <---------ARR14(2)      --------->GLK1(2)<---------HSFB2a(2)   <---------------AGL15   --------------->AGL15             <---------ANAC58   --------->LBD16------->TEIL       <---------ANAC58  <-----------------AGL1   --------->ARR14(2)  ----------------->AGL2   <---------ARR14(2)      --------->LBD16                           <-------  ----------------->AG<---------LBD16------>ZmHOX2a(2)                                       --------  <-----------------AGL2   --------->GLK1(2)       ------>NtERF2   <---------ZAT2         -----------  ----------------->AGL1  <---------GLK1(2)      <---------LBD16   <---------At4g35610 <---------ARR14(2) --->ID1         <---------GLK1(2) <---------ARR14(2)<----------DOF2             <----------DOF2 >ID1 --------->ARR14(2)--------->LBD16   <----------DOF2<---------YAB1         <---------DAG2-------   tcttccccaatctgggattgaatctccagaatccatggatcgtgctttaactccgcgttttgatactccagctactctctcccctttccgataccgatat  29098600                                        <---------ANAC58                                        <---------ANAC58                                    <-------GAMYB                                   <---------MYB46(3)                                 <------NtERF2--------->ANAC58                                ------>NtERF2 --------->ANAC58                                <---------ATERF1(1)                                --------->LBD16                               <---------DEAR3(1)                               --------->DEAR3(1)                               <---------ATERF1(2)                               --------->ATERF1(2)                               --------->RAP2.3(3)                               --------->RAP2.3(2)                              --------->RAP2.3(1)                              --------->ERF1  --------->ANAC46                              --------->ATERF1(1)      ------>ZmHOX2a(2)                   <---------WOX13(1) --------->At4g35610          --------->RAP2.6(1)     <------ZmHOX2a(2)                  --------->ATHB12 <---------At4g35610          <------NtERF2  --------->LBD16                            <---------YAB1 <---------GLK1(1)            --------->DEAR3(2)      <---------GLK1(1)              --------->ARR14(2) <---------ZAT2               --------->ORA47(2)      --------->GLK1(1)         <---------ZAT2<------ --------->ZAT2               --------->DEAR4(2)     --------->ARR11(3)         --------->ZAT2<------ --------->GLK1(1)           <---------ATERF1(1)     <---------ARR11(3)         <---------At4g35610 --ARR14(2)                  ------>NtERF2  <---------ANAC58        <---------ANAC58 --------->GLK1(2) ->ARR14(2)                 --------->ANAC46<---------ANAC58        <---------ANAC58 <---------ARR14(2) ------>AGL1           --------->ARR14(2)   <---------ANAC46        <---------ANAC46 ------->TEIL -->CCA1(2)            <---------ARR14(2)  <---------LBD16   <------ZmHOX2a(2)  --------->At4g35610--   gggagctctctggccatcactcgacgattcgcgccggcgattgtttgcgcgaaacgatctccgatcgatggagtgagcgacgagctgaatctgattgctt  29098700  Previous    Next  AGI:  At1g77410.1    Description:  BGAL16 (BETA-GALACTOSIDASE 16); beta-galactosidase. Identical to Beta-galactosidase 16 precursor (BGAL16) [Arabidopsis Thaliana] (GB:Q8GX69;GB:Q9CAR2;GB:Q9FVW7); similar to BGAL11 (beta-galactosidase 11), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G35010.1); similar to BGAL6/MUM2 (MUCILAGE-MODIFIED 2), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT5G63800.1); similar to BGAL13 (beta-galactosidase 13), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT2G16730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61895.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71666.1); similar to unnamed protein produ Range:  from: 29093591    to: 29098158    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g77420.1    Description:  hydrolase, alpha/beta fold family protein. similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT5G16120.1); similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT5G16120.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO42147.1); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073) Range:  from: 29098393    to: 29100610    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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