Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------HSFC1(2)                           --------->HSFB2a(1)                           <---------HSFB2a(1)                           --------->HSFC1(2)                          --------->ANAC58                          --------->ANAC58                       ------->GAMYB                      --------->ANAC58                      --------->ANAC58                     ------>MYB46(1)                 ---------->DOF2                     ------>MYB83                   --------->AHL20(2)                    --------->MYB52(1)     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)    <----------DOF2--------->AtMYB61     --------->LBD16 --->ZmHOX2a(2)   <---------MYB55(2)    --------->ANAC58 ---ZmHOX2a(2)    --------->DEAR3(2)    --------->ANAC46 >ANAC58          --------->MYB46(3)    --------->ANAC58       --------->ALFIN1 >ANAC58          <---------MYB52(2)   <---------LBD16       <-----------RAV1(1)                    -   tcggttctttagccatccgaaccaacggaagcctcttgaatcgcgcaaatcaaattaaagcaaatgttgggctaaaatgggatttttcaaaagtttaggg  29091600                                                     ------>ZmHOX2a(2)                                                   --------->ARR11(3)                                                   <---------ARR14(2)                                                   <---------AGP1                                                   --------->ARR14(2)                                                   <---------ARR11(3)              <----------DOF2                     <---------CCA1(2)                                <-   <---------ARR11(3)                     <---------AHL20(2)                                       <-  <---------CCA1(2)                     <---------AHL20(2)                 <-----------GT1         <- ----->ZmHOX2a(1)        <-----------GT1--------->AHL20(2)       ---------->DOF2                 <---   tcctatatctaatgtgctttagagttttcacatctgtgtaatataaatttgtggatctgtggatgtctaaagacaattcacattttgaattttgaagttt  29091700      ----------->GT1    ----------->GT1            ----------->GT1    <---------ANAC46          --------->DAG2   --------->ALFIN1          ---------->DOF2 --------->ALFIN1       --------->CCA1(2)                            ----------->GT1 --------ANAC58        --------->ARR11(1)                           --------->DAG2 --------ANAC46        --------->ARR11(3)                          ---------->DOF2 <-----------GT1 --------ANAC58        <---------ARR11(3)               <---------GLK1(1) <---------TOE2(3) ------YAB1      ----------->GT1                 ------->TEIL--------->ZAT6    <---------AHL20(2)   tgagtgtggggaaaaaagattgtaagatatgaaaagtaaaattagtaaatgaatttagaaatcacactaaaaagttaacatttttttgctacatacaact  29091800                                                                                <---------ARR14(2)                                                                             <---------ANAC55(2)                            --------->AHL20(1)                        ------------>CBF                            <---------AHL20(1)                        ----------------->AG <---------ATHB12                         --------->YAB1                        <---------AHL20(2)       <------NtERF2                        <---------ATHB12                <---------AHL20(2)   <---------TOE2(3) ------                        <---------ATHB51               --------->AHL20(2)  --------->AHL20(2)--------                    ------------>CBF         ------------>CBF ------------>CBF  --------->ARR14(2)  -             --------->DAG2 <---------AHL20(2)         <---------AHL20(2) <---------ATHB12--------->GLK1(2)            ---------->DOF2 --------->AHL20(2) --------->WOX13(1)   <-----------GT1   ---------------   tcttaaactatggaaaaagggtcccaataataaaatacaaaactactatcaatctaattaaatattcaattttccaattaagtatatggccgaatcagtc  29091900                                                                                  <-----------TGA1                                                                                  <-----------HVH21                                                                                 ====================                                                                                 --------->bZIP60(2)                                                                                 <<<<<<<<<<HY5                                                                                 <---------TGA1a                                                                                 <---------bZIP60(1)                                                                                 --------->TGA2(1)                                                                                 ====================                                                                                 <---------TGA2(1)                                                                                 --------->ANAC46                                                                                 --------->bZIP60(1)                                                                                 <---------O2                                                                                 --------->O2                                                                                 --------->ANAC55(2)                                                                                 --------->TGA1a                                                                                 ====================                                                                                 ====================                                                                                ----------->STF1                                                                                <-----------STF1                                                                         ------>ZmHOX2a(1)                                                            ----------->TBP    <---------DOF5.7(2)                                                          <----------DOF2--------->LBD16                                                          --------->TOE1(3) <---------At4g35610                                                          --------->TOE2(3) --------->At4g35610                                                          =================================bZIP_DOF                                                  ----------->GT1     <------ZmHOX2a(2)   ---------->DOF2                              ------>ZmHOX2a(1)    --------->ARR14(2) <---------AHL20(2)                             =============================HOX2a_HOX2a   ---------- ------>CBF                --------->AHL20(2)   --------->LBD16      <---------ARR14(2)<---------ZAT6 ->WOX13(1)                <---------AHL20(2)  <---------LBD16  --------->DAG2----------->HVH21 -------->AHL20(2)        --------->AHL20(2)<---------ARR14(2) ---------->DOF2--------->WRKY12  <---- -->AGL1       ------------>CBF             --------->ARR14(2) ============================bZIP_DOF   aatttaaaagtatagggctcaatggaaatttaaaaaacagtttggggttcctgggtaaaactttaaaaagcgatcctgagttgacgtcactgttaaagct  29092000                                                                                                    -                                                                                                    <   <----------DOF2                                            ------->GAMYB                         - <---------At4g35610                                         <------------MYB.PH3(1)      --------->ICU4 --------->At4g35610                                 <---------MYB52(1)                   <---------ATHB12 =============bZIP_DOF                             ------->GAMYB                          <---------YAB1 =bZIP_DOF                               --------->DEAR3(2)<-----------GT1         <---------At5g28300 =bZIP_DOF                    --------->ZAT18     --------->MYB46(3)        <---------At4g35610     < =============bZIP_DOF       <------ZmHOX2a(1)    <------------AtMYB77      --------->At4g35610     - >DOF2             ---------->DOF2       --------->MYB46(3)--------->ARR14(2)     <-----------GT1 --- ------DOF2--------->YAB1 <------ZmHOX2a(1)<-----------HVH21<---------At5g28300  <---------YAB1   <--   ttcagctttgtaatgaaaactcaaagtaggaggacaccatgaaaccgtcgcaaccgctatgtaaccgcattgttgatcagcttattactgccatgattca  29092100              <------NtERF2             ------>NtERF2            --------->ANAC46            <---------DEAR3(1)            --------->DEAR3(1)         ----------->HVH21                               --------->ZAT2 --------->DEAR3(1)                                      <---------ZAT2 -------->HSFB2a(1)                                      --------->At4g35610                     <--- ---------HSFB2a(1)                                      <---------At4g35610              <---------ARR14(2) -------->DEAR3(2)                   <------NtERF2    --------->ZAT2                      --------->ARR14(2) ---------HSFC1(2)                  ------>NtERF2     <---------At4g35610                 <---------GLK1(2) -------->HSFC1(2)                 <---------DEAR3(1) <---------ZAT2                  <---------LBD16 ------>ARR14(2)                 ------->GAMYB        --------->At4g35610             --------->LBD16 -------ARR14(2) <---------MYB52(1)--------->ALFIN1 <-----------RAV1(2)   ------>ZmHOX2a(1)--------->GLK1(2)   gaaccgtccattcgacgccgttctcgcttcttcaacggtggcgaaaccatggactcagcagctcgtctccgatgtcctccattctatccccagattcttc  29092200                                                     ---------->DOF2                                                   --------->DOF5.7(2)                          ---------->DOF2          <---------MYB52(1)                      <---------DEAR3(2)          --------->At5g28300                     <---------ETT(2)          <---------At5g28300                     <---------DEAR3(1)      <---------ZAT14                           <---------bZIP60(1)                    <---------ORA47(1)       --------->WRKY38(1)                       --------->O2                    --------->RAP2.6(3)      --------->ZAT14                   --------->YAB1                    --------->SPL7           --------->WRKY12                ------->TEIL                   <-----------HVH21        --------->DOF5.7(2)   --------->TOE2(3)    <---------O2           --------->ARR14(2)               <---------MYB52(1) --------->ARR14(2)      --------->bZIP60(1)       <---------ALFIN1<------NtERF2 <-----------TGA1<---------DOF5.7(2)  <---------YAB1 -------DOF2<------ZmHOX2a(2)        <-----------HVH21         <---------ARR14(2)    ------->GAMYB  -   tttatctccccacgatccatcggtcggcaaaagggttttcgtcaccgttcaccgttaaagcagagaaacctcagtgatgaatcacaacgacgtcgttctg  29092300                                  ------>ZmHOX2a(1)                               <------ZmHOX2a(2)                        --------->ARR14(2)                        <---------ARR14(2)                                                    -------                     <---------ANAC58                                                ------>ZmHOX2a(2)                     <---------ANAC46                                    <-----------------AGL3                     <---------ANAC58                                    <-----------------AGL2                 --------->LBD16 --------->TOE1(2)                     <---------ARR11(3)     -------         <---------HSFB2a(2)  ------->TEIL                             --------->ARR11(3)    ------>MYB83         >>>>>>>ZML2<-------TEIL------>ZmHOX2a(2)          ==========================================         --------->HSFB2a(2)  <---------ARR14(2)           ---------->DOF2   ========================   >>>>>>>ZML2 <---------LBD16--------->ARR14(2)        <---------HSFB2a(2)  <----------DOF2 ------>MYB46(1) -------->ARR11(3)<---------MYB52(1)  ---------->DOF2<--------P       <---------GLK1(1)     <--------   aagttctagttctaggtcccggtgcgtatatggatcctaagaaagtctctatcgggttgcagaaagcattggagttcttcttttggatcgaaacccactt  29092400                                                                                                <----                              --------->CCA1(2)                                                 -----                             <---------ARR11(3)                                                 <----                 <------ZmHOX2a(2) <---------ANAC58                                       --------->ANAC58          <---------ICU4     --------->ARR11(3)                                           --------->ANAC58       --------->YAB1        --------->ARR11(1)                  <---------TOE2(3)    ------>NtERF2 -->TGA1a<---------YAB1      <---------ARR14(2)              <----------DOF2         <---------ETT(1) -->O2<---------YAB1         --------->ARR14(2)          <---------ATHB12            --------->ANAC46 ===bZIP_DOF    <---------ARR11(3) <---------ANAC58 --------->ANAC58    <---------LBD16<---------MYB52(1) ===bZIP_DOF    --------->ARR11(3) <---------ANAC46 --------->ANAC58 <---------GLK1(1)--------->LBD16 -ALFIN1 --------->ICU4    ----------->ARR10     ---------->DOF2 <---------TOE1(3)  <---------LBD16   cgggtttgatcataatgagatcacttgcagagatatggcttgtctattggccaaaggcaatgactttaagggtctctgggattttctccggcaagtctct  29092500  Previous    Next  AGI:  At1g77400.1    Description:  similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT1G21695.1) Range:  from: 29090705    to: 29091758    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g77405.1    Description:  binding. similar to EMB2745 (EMBRYO DEFECTIVE 2745) [Arabidopsis thaliana] (TAIR:AT5G39710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68240.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 29092039    to: 29093415    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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