Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     ------>ZmHOX2a(2)                                                                   ===========================HOX2a_HOX2a                                                                   ==============================HOX2a_HOX2a                                                                 <---------ARR14(2)                                                                 --------->ARR14(2)                                                           --------->MYB111(2)                                                           --------->MYB52(2)                                                           <---------MYB46(3)                                                       <---------DREB2C(2)                                                       <---------DEAR3(1)                                            --------->ALFIN1<-------GAMYB         <-------MYC3                     --------->At4g35610  <------MYB46(1)         ------->MYC3                     --------->ZAT2  <---------AtMYB61     <-------TEIL                         <---------ZAT2  --------->ALFIN1   <---------SPL7                         <---------At4g35610  <------MYB83                   <------  <---------ANAC46                      <-----------RAV1(2)--------->MYB55(2)              --------->ALFIN1  <---------ANAC58                 <---------ANAC58 ----------->TGA1                      <------ZmHOX2a(1)  <---------ANAC58                 <---------ANAC58 ----------->HVH21                   --------->ALFIN1  <---------ANAC55(2)            ------->GAMYB   <---------DEAR3(1)========================HOX2a_HOX2a --------------->AtSPL3        <---------At4g35610<---------At4g35610                  <------ZmHOX2a(1) ---------TGA2(2)              --------->At4g35610--------->At4g35610                --------->ALFIN1 >GAMYB --------->ANAC46<------ZmHOX2a(1) ----------->RAV1(2)<--------P             <------ZmHOX2a(1)   gatgacgtacacgttgaatagctcgaggaagacaactgcgtctcagctggggcgatgacggtggttggatcggagactacgagagaggaggaggaggggg  29009600                          <---------LBD16                          <---------At4g35610                       --------->ZAT2                       <---------ZAT2                       ----------->RAV1(2)                       <-------GAMYB                       <---------At4g35610                       --------->At4g35610                       --------->ATERF1(1)                      <---------ERF1                      <---------RRTF1(1)                      <---------RAP2.6(1)                      <---------RAP2.3(1)                      <---------ATERF1(1)                      <---------MYB46(3)                      <---------DEAR3(2)                      ------>NtERF2                     <---------DEAR3(1)                     <---------RAP2.6(2)                     <---------RAP2.3(3)                   <---------RAP2.3(1)                  <---------DEAR3(1)              <------NtERF2              <---------At4g35610              --------->At4g35610             --------->RAP2.6(2)             <---------ATERF1(1)            --------->SPL7--------->ATERF1(1)           <---------DREB2C(1)           --------->ATERF1(1)           <---------ATERF1(1)           ------>NtERF2  --------->At4g35610           <------NtERF2  <------NtERF2           --------->DREB2C(1)          <---------SPL7 <---------ATERF1(1)          <---------RAP2.3(1)          <---------ATERF1(1)                                                         <---------HSFB2a(2)          <---------ERF1<---------DEAR3(1) --------->ALFIN1                           --------->LBD16          ------>NtERF2<------NtERF2     --------->O2                                 --------->HSFB2a(2)         <---------ATERF1(2)             <---------ANAC58                            <---------ANAC46         --------->ATERF1(2)         <-----------HVH21                               <---------LBD16         <---------RAP2.3(3)       ------->TEIL                                  --------->At4g35610         <---------ANAC58<---------ERF1  <---------O2   --------->ZAT2           --------->ZAT2         <---------RRTF1(2)      <---------WRKY18(1)    <---------ZAT2          ----------->ARR10   <         <---------DEAR3(1)   <---------ANAC58          --------->At4g35610   <---------ANAC58      <         <---------RAP2.6(2)  <---------ANAC46          <---------At4g35610   <---------ANAC46     <-         <---------RRTF1(3)<---------RAP2.6(2)       <------ZmHOX2a(1)        <---------ANAC58     <-         <---------RAP2.3(2)  <---------ANAC58    <------ZmHOX2a(1)     --------->MYB111(1)       ---         <---------ANAC58<---------RAP2.3(1)--------->REM1(2)           --------->MYB111(2)       <--         <---------DREB2C(2)------>NtERF2<---------ANAC58              <--------P<---------At4g35610<        --------->RAP2.6(3)<---------DEAR3(1)   --------->ALFIN1     <------MYB83<---------ZAT2   ---   <-------TEIL  --------->SPL7<----------DOF2<---------ANAC46       <------MYB46(1)<---------LBD16<- ---------------WRI1 <---------RAP2.3(2) <---------ANAC46  <---------SPL7  --------->ALFIN1      <---   agaagtccatggcggccgctacggcggctgcggcttgaacgtcgcgtggagaggaggaagctggacggggaaggtaagtggcgagctccgggaagttgag  29009700                                                --------->RAP2.3(3)                                                --------->RAP2.6(2)                                                --------->ATERF1(2)                                                --------->DREB2C(2)                                                --------->RRTF1(3)                                                --------->RAP2.3(2)                                                --------->RRTF1(2)                                                --------->DEAR3(1)                                               --------->ATERF1(1)                                               --------->DEAR4(2)                                               --------->ERF1                                               --------->RAP2.6(1)                                               --------->RRTF1(1)           <---------------AGL15              ------>NtERF2           --------------->AGL15              <---------ATERF1(1)          <-----------------AGL2             --------->ANAC46          ----------------->AGL3            ------->PIF4          ======================================================================================MADS_MADS          <-----------------AGL3            <-------PIF4          ----------------->AGL1            <-------MYC3        <---------ARR14(2)                  <-------PIF5       --------->HSFB2a(1)                  ------->PIF5       <---------HSFB2a(1)                  <---------ABI4(2)       <---------HSFC1(2)                   ------->MYC3       --------->HSFC1(2)                   <-------MYC2      <---------HSFB2a(1)               --------->ZAT14      --------->HSFB2a(1)               <---------ZAT18    <------NtERF2                       --------->ZAT18   --------->LBD16           <-------TEIL <---------LBD16                      ------->MYC3    <---------ARR14(2)           --------->ARR14(1) <------NtERF2                        <-------MYC3    --------->ARR14(2)           --------->GLK1(2) ---------ATERF1(1)              <-----------TGA1------>NtERF2                    <---------ARR14(2) ---------RAP2.3(1)              <-----------HVH21<------NtERF2                   --------->ARR11(1) --------RAP2.6(2)              <---------ANAC46<---------ATERF1(2)             ----------->ARR10 --------RAP2.3(2)             <-------TEIL--------->ANAC58   --------->ALFIN1<-----------------AG ------>RAP2.6(3)           --------->At4g35610--------->RAP2.3(1)  --------->DAG2<---------GLK1(2) -------ORA47(1)            <---------At4g35610--------->ORA47(2)  ---------->DOF2--------->ARR14(2) ---------ORA47(2)          --------->ZAT2 --------->ANAC58 --------->ALFIN1  ----------------->AGL2 ------>SPL7<----------DOF2 ----------->RAV1(2)<------NtERF2<---------ANAC46--------->ANAC58 --------DEAR3(1)           <---------ZAT2 --------->ANAC46<---------MYB52(1)--------->STY1(2)   <--- ---ZmHOX2a(1)           <---------At4g35610------->MYC2<---------LBD16     --------->ANAC58     <---   gacggcggaagttcctttaatggtgagagcagctgcgtcatgtgcacgcgccgccatttccggtgtggagaaagtgcctagccagattcggctcttcttg  29009800                                                                                              <------                                                                                              <------                                                                                              <------MYB46(1)                                                                                              <------                                                                                              <------MYB83                                                                                <---------ANAC58                                           <---------SPL7            ------>ZmHOX2a(2)       <-------                                           --------->LBD16          <------ZmHOX2a(2)        --------            <---------LBD16               <---------HSFB2a(2)      --------->ARR11(3)        --------            <---------HSFB2a(2)           --------->HSFB2a(2)      <---------ARR11(3)        <-------           ------>ZmHOX2a(2)           ------------------>SPL14    <---------AGP1        <------MYB83          --------->GLK1(1)            --------->ARR14(2)          <-----------ARR10     --------->MYB55(2)          <---------GLK1(1)            <---------ARR14(2)          --------->ARR14(2)    <------MYB46(1)          <------ZmHOX2a(2)      <-------MYC3                      <---------ARR14(2)    <---------MYB46(3)         <---------AGP1          <-------MYC2                     <---------ARR14(1)   <--------P         --------->ARR14(2)      ------->MYC2 --------->ANAC58    <---------CCA1(2)  <-----------RAV1(1)         --------->ARR11(3)      ------->MYC3--------->SPL7     --------->ETT(1)<---------ANAC46 ----         <---------ARR14(2)     <---------TGA1a               <-----------HVH21 <---------ANAC58 <---        <---------CCA1(2)       --------->TGA1a       ----------->HVH21     ------->MYC3 <---------DEAR3(2)     <---------LBD16          <---------ALFIN1--------->ANAC58----------------------->TaNAC69(2)----- ------ANAC58              --------->PCF2<---------LBD16  <---------LBD16   <-------MYC3<---------AtMYB61 ------ANAC58    --------->GLK1(1) <-------TEIL------>NtERF2--------->LBD16--------->ANAC46  --------   cgaggctctcggatctcggagacccatttgccccacgttcgcatccggacgcctcggtaacccgggtcggatcttacacgtttcttggtgttggttcggt  29009900                                       <---------At4g35610                                       <---------LBD16                                       <------NtERF2                                       --------->At4g35610                                      ------>NtERF2                                     ------->MYC2                                     <---------ALFIN1                                   <-------MYC3                                   <---------ATERF1(1)                                  <-------MYC2         <------MYB83              --------->LBD16                                      ------->MYC3         <------MYB46(1)  ------>ZmHOX2a(1)                                            --------->bZIP60(2)       <--------P       ===============HOX2a_HOX2a                                     <---------O2     <-----------RAV1(1)------>ZmHOX2a(2)                                              --------->ANAC46 ---ANAC58            <---------ARR14(2)                                               --------->TGA1a ---ANAC58            <---------ARR11(3)                                               <---------TGA1a ---ANAC46            --------->ARR14(2) --------->LBD16                               --------->ANAC55(2) --MYB46(3)           --------->ARR11(3)<xxxxxxxxxxxxxxxxsmallRNA(i)                   --------->ANAC58 ->MYB52(2)         <---------YAB1 <-----------HVH21                                   --------->O2 ->MYB55(2)       --------->YAB1   ------>NtERF2                                       --------->ANAC58 --DEAR3(1)      <---------YAB1   --------->ANAC46              --------->MYB52(1)     <---------ANAC55(2) ----->MYB55(2)  --------->ICU4  <---------LBD16              --------->ARR11(3)  ----------->HVH21 ------MYB46(3)--------->YAB1   ------>ZmHOX2a(1)        <---------ANAC46        <---------WOX13(1) ---->ALFIN1  --------->ICU4 ------>ZmHOX2a(1)          <---------LBD16       --------->WRKY18(1) ->MYB46(2)   <---------YAB1<---------ALFIN1          ----------->HVH21      <-----------HVH21   gggagtcttgttggtgatgatgatgatcctcctcctccggcaccggagacgattgtttgacggagataatggatgactcggtcattgacacgtgagtttg  29010000                       <-------TEIL                       ------->TEIL                       <---------TOE2(2)                    --------->ANAC55(2)                    <---------ANAC58                    <---------ANAC55(2)                    <---------ANAC58               <---------------AtSPL8                                                         -------               <---------------AtSPL3                                                         -------          --------->REM1(2)      <-----------TBP                                              -------          <---------ZAT14    ----------->GT1                                                  -------       <---------ZAT6  --------->SPL7<---------AHL20(2)                                       -------     <---------ANAC58--------->TOE1(2)---------->DOF2                               --------->ICU4     <---------ANAC58<---------SPL7----------->TBP       ---------->DOF2<------------CBF   ----------   actcagtgagtgtgaagagagtacgtacgtagggtttatataaagactagagagagagagaaagagagttgaagtattgaagtgaaatgttgaagttagt  29010100                                      --------->ZAT18                                      <---------ZAT18                                      --------->REM1(2)                                      <---------ZAT14                                      --------->ZAT14                                    --------------->AtSPL8        <---------YAB1     =================HOX2a_HOX2a   <---------------AtSPL8        <---------AHL20(2)     <------ZmHOX2a(1)             <---------ANAC46              --------->AHL20(2) ---------->DOF2               <-----------RAV1(2)               <---------AHL20(1) -->MYB46(2)                <---------YAB1                  ------------>CBF -->MYB111(2)               ----------->HVH21             --------->ANAC46 -->MYB59                 <---------ICU4        <---------YAB1   --------->YAB1 -->MYB52(2)              --------->YAB1        ----------->TBP--------->ICU4                      -- -->MYB111(1)            <---------YAB1 <---------ZAT14 --------->ANAC46                         <--- -->MYB.PH3(2) ------>ZmHOX2a(2)   --------->ALFIN1   <-----------GT1       <---------KAN4(2)  <-----   tagaaaaggacagtcgatcgcttacttatgatgacaggtgtgtacacattataaattcacacatcaatattatttgagaatgacccattttttgttttcg  29010200     <---------TOE2(3)                     <-----------GT1   <---------AHL20(2)                     <-----------GT1  --------->AHL20(2)                  <---------AHL20(2) ------->AHL20(2)             --------->AHL20(2) ------MYB52(1)             --------->ANAC58                    <---------AtLEC2      ------------>CBF ----ANAC46                 --------->ANAC58               --------->TOE2(2)    ------->TEIL      ---   tttatttaatgttgatattttgcattcggcaagtaaatgtttatttatctcttcgtgataacctatgcatggtccatgtatgaacttgatcaattcaatg  29010300                                                    <---------YAB1             ---------->DOF2                                                   --------->AHL20(2)       --------->YAB1    <-----------GT1                   <---------AHL20(2)        <---------ARR11(3) -------->GT1                <------ZmHOX2a(1) ----------->GT1  --------->ARR11(3)            -------   gggtaataacattcccattcggaattgactaggaacttatatttttgttttgttaaaattgactaagaacttatgcaatagtaaagggagaatgggcaga  29010400                                                                                                  ---                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                            <--------                         <---------AHL20(1)                <---------AHL20(2)            --------->ATHB51                         <---------AHL20(2)                --------->AHL20(2)            <---------AHL20(2)                         --------->AHL20(2)               --------->YAB1                 <---------ICU4                        --------->YAB1                --------->AHL20(2)                 --------->AHL20(2)                       <---------YAB1                 <---------AHL20(2)      <---------AHL20(2)  <--                 <-----------GT1                    --------->TOE2(3)     --------->ICU4--------->ICU4 ---->GT1   <---------YAB1<---------YAB1            <----------DOF2  ----------->GT1 <------ZmHOX2a(1)   aaaaaatcaaaaatatgtttaacctattataatgtgtccatgagcttatttcaactttaattttaatgggatagtaatatttcattaggaattatttcca  29010500  Previous    Next  AGI:  At1g77200.1    Description:  AP2 domain-containing transcription factor TINY, putative. Identical to Ethylene-responsive transcription factor ERF037 (ERF037) [Arabidopsis Thaliana] (GB:O80654;GB:A0MEG8); similar to DRE-binding transcription factor, putative [Arabidopsis thaliana] (TAIR:AT4G16750.1); similar to TINY2 (TINY2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G11590.1); similar to TINY-like protein [Populus trichocarpa] (GB:ABQ62969.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 29009251    to: 29009985    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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