Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------->DAG2                  ---------->DOF2               <---------ANAC55(2)               <------MYB83                                                         =================               ----------->GT1                                            <---------LBD16               <------MYB46(1)                                           ----------->RAV1(2)   <-----              --------->MYB111(1)                                       -------->P  ---------->DOF2 <              --------->MYB46(2)        --------->ANAC46                =============================              --------->MYB59           --------->ANAC58        =====================================            <---------MYB52(1)          --------->ANAC58        ---------->DOF2  ----------->GT1  <-- >ZmHOX2a(1)<<<<<<<<<MYB98    <------------CBF     <-----------------------TaNAC69(2)          <-----   tctgattcccctaagttaggtaaagtagtttccattgaactcaagaaactgatgaagtagaagagaaaaagacttacctggaaatgtaaagtcgatgact  28988500              <------NtERF2             ------>NtERF2            --------->DEAR3(1)           <------NtERF2           --------->RAP2.3(1)          ------>NtERF2          <---------RAP2.3(1)          <---------ERF1          <---------DEAR4(2)          <---------RRTF1(1)          <---------ATERF1(1)          <---------ORA47(2)         --------->ANAC46         <---------RRTF1(2)         <---------RRTF1(3)         <---------RAP2.3(2)         <---------ATERF1(2)         <---------RAP2.3(3)         <---------DEAR3(1)        --------->RAP2.6(3)       --------->MYB52(1)      ----------->HVH21    <---------ANAC58    ==============================bZIP_DOF    <---------ANAC58    <---------TGA1a =============bZIP_DOF             --------->At4g35610 ----ANAC58--------->RRTF1(1)     <---------ARR11(3) ---------WOX13(1)          <---------At4g35610                           ------>ZmHOX2a(1)   ------- =============MYC_MYB     <---------HSFB2a(2)                        <----------DOF2          <------ =============bZIP_DOF    --------->HSFB2a(2)                     <-----------GT1             <------ -------WRKY18(1)      <----------DOF2<-------TEIL           <---------YAB1                   ------- ----ANAC58--------->ATERF1(1)    --------->ARR11(3)         <---------TOE2(3)               ------->TEIL   tgactgacttgacggcgccatgggactttcagaagagagcttcattctcactgtaagaatattaagtttgactttcctgagtgagagactacatgaagct  28988600                                                               --------->SPL7                                                              ------>NtERF2                                                              --------->MYB52(1)                                                             <---------SPL7                                                           --------->At4g35610                                                           <---------At4g35610                                                      <---------YAB1                                                     --------->AHL20(1)                                                     <---------AHL20(1)                                                     <---------AHL20(2)                          <-------MYC3               --------->AHL20(2)                          ------->MYC3          --------->AHL20(2)   ------->TEIL         <---------TOE1(2)       <---------AHL20(1) <-------TEIL     <---------ICU4                <---------AHL20(2)   ------>ZmHOX2a(2)           ---- -->At4g35610     --------->YAB1                --------->AHL20(1)  <------ZmHOX2a(2)        <------- ---At4g35610    --------->ICU4                <---------AHL20(2)  --------->ARR14(2)        <------- ---ZAT2       --------->YAB1                  --------->AHL20(2)  <---------ARR14(2)       --------- -->ZAT2      <---------YAB1                   --------->YAB1----------->HVH21           <---------MYB46(3)   ggatgcatcgagcattacaataatcacacgtttttgacgctaatccaaattatattatattagcggacggatcggaacaaaatcaacacgatgggtcaat  28988700                                                                              <---------AHL20(2)                              <---------ARR11(3)                              --------->AHL20(2)                            ------>ZmHOX2a(1)                                --------->AHL20(2)                        --------->ARR11(3)                               --------------->AGL15 <---------TOE2(3)--------->LBD16                                       <---------ANAC55(2)        <- ----->YAB1       ----------->GT1        <---------HSFC1(2)             --------->ANAC55(2)     <---- --WRKY12        <---------ANAC46        --------->HSFC1(2)           <-----------GT1           <---- --WRKY38(1)    <---------LBD16 ------>ZmHOX2a(2)                 --------->AHL20(2)           <----- >WRKY18(1)<---------AHL20(2) --------->AGP1   <----------DOF2    <---------AHL20(2)           ------   gttaagtttgaatttttttgcggaaaaatcctgatctattagatgtttcctttgtaaaaccctgatgttttattacttaataaataaaccctcaaattag  28988800                                              --------->AHL20(2)     --------->WOX13(1)                       <---------AHL20(1)   <---------MYB52(1)                         --------->AHL20(1) ----------->GT1                              <---------AHL20(2) ------TEIL                              --------->MYB46(3) --MYB46(1)                              ------------>CBF --MYB83--------->YAB1       ---------->DOF2 <---------ATHB12                   --------------------- ----TOE2(3)     <---------TOE2(3)   <---------KAN4(2)                     <---------DAG2 --->MYB59       <---------YAB1    <------ZmHOX2a(1)                       <----------DOF2   gttcagttaatcaaaaattaagtttgtgttgaaaagaggaataaccaataaaatatagggtttgttttgcaaaaacacttttcttcgtatgagtcgacga  28988900                                       ------>ZmHOX2a(2)                                      <------ZmHOX2a(2)                                     <---------ARR14(3)                                     --------->ARR11(3)                                     --------->GLK1(2)                                     <---------ARR11(3)                                     --------->ARR14(2)                                     <---------AGP1                                     --------->ARR14(3)                                     <---------ARR14(2)                                   ----------->ARR10                             ---------->DOF2                            ==================HOX2a_HOX2a                            =================HOX2a_HOX2a                            <------ZmHOX2a(1)                   *TSS   <---------TOE1(3)                                <---------ZAT6                   <---------------AGL15                                  <---------YAB1                   --------------->AGL15----------->HVH21             <----------DOF2                   --------->HSFB2a(2)--------->CCA1(2)            ------>NtERF2              <------                   <-----------------AGL1 ---------->DOF2         --------->DEAR3(1)    --------->YAB1 >WRI1  <----------DOF2   <---------TOE2(3)         --------->ANAC46<------NtERF2    --------->YAB1 <   gtctggggaccttttagttttctcgattaaggaaaggaagatctgaaagtgaacgcgaaatcacttcgccagcgttattgttaacaagaatcatcagatt  28989000          ------>ZmHOX2a(2)         <------ZmHOX2a(2)         --------->CCA1(2)        --------->AGP1        <---------ARR11(3)        --------->ARR14(2)                                                <---------ANAC58        --------->ARR11(3)                                                <---------ANAC58        <---------AGP1                                                <---------DEAR3(2)        <---------ARR14(2)                                           <---------DEAR3(1)       <---------CCA1(2)                      ----------->HVH21   <---------ANAC58      ----------->ARR10                      --------->At5g28300  --------->ANAC55(2)    --------->LBD16                         ----------->GT1       <---------ANAC55(2)   <---------ANAC46                         --------->LBD16       <---------ANAC55(1)   --------->DEAR3(1)                      <---------ANAC46       <---------ANAC58      <---------LBD16  <------NtERF2                     <---------GLK1(2)             <---------ANAC46    <-----------GT1 ---GLK1(2)                     --------->At4g35610    <---------MYB46(3) <---------ANAC46--------->LBD16 ---------DEAR3(1)         --------->ZAT6 <---------LBD16    <---------MYB46(3)    --------->TOE2(3)   agtcgccgtagatctgaatcaacgtcgtaacagtagcagaattttgcggtgaaacgatggttttggttacgtctgtgcgtgattacattaaccggatgct  28989100                  --------->HSFB2a(1)                  ------>ZmHOX2a(2)                  --------->HSFC1(2)                  <------ZmHOX2a(2)                 <---------TOE1(3)                   <---------ARR14(2)                 <---------TOE2(3)            --------->DAG2          ------>NtERF2                      ---------->DOF2          --------->LBD16                  --------->At5g28300                                <------         --------->ANAC46                 ----------->GT1                                     -------        <---------LBD16                --------->MYB52(1)            <---------WOX13(1)       ------- <------ZmHOX2a(1)<---------HSFC1(2)--------->ANAC46 --------->ARR14(2)    <-----------ARR10 <-------   tcaggacatctccggcatgaaggttctcatactcgactccgaaacggtaaagtccgatctcgtcttcttcgattgctaatcttctctgatttgtttctgg  28989200                                                             --------->AHL20(2)          --------->ATHB51                           --------->ATHB12       --------->YAB1                          <---------ANAC46      <-------TEIL                             <---------ANAC55(1)   <---------MYB46(3)       --------->ARR14(2) --------->ANAC55(2) ---HSFB2a(2)               <---------ARR14(2) <---------ANAC58                             --------- -->HSFC1(1)              --------->LBD16      <---------ANAC55(2)                         --------->ANAC58 -->HSFB2a(2)         <-----------GT1          <---------ANAC58              <---------TOE1(2)    <-- --LBD16  <---------ICU4<---------LBD16  <---------YAB1      <---------AHL20(2) <--------P --------->ANAC58   aatcgtggttcataatttcccttgtaaccggaaacacatcttcgtgattacttgtttattggattaattgttgaatttgcaggttagcaatgtaagcatt  28989300                                                           <---------ARR11(3)                 --------->At4g35610                       --------->ARR11(3)             ---------->DOF2              <---------ZAT2                  <---------YAB1                            ----------->HVH21              --------->At4g35610           <---------At4g35610  <-----------HVH21    --------->At4g35610              --------->ZAT2         <-----------RAV1(1)   <---------ARR14(2)         <---------At4g35610     <---------At5g28300---------->DOF2 <---------ANAC46   --------->ARR14(2)   <-----------HVH21 >ICU4  <-----------HVH21      --------->ALFIN1  <---------WOX13(1)            --------->bZIP60(1) -------ANAC46<---------At4g35610   <---------ANAC46  <-------TEIL        --------->GLK1(2)  <-------   gtgtattcacagtcagagctgcttcagaaagaagtgtttctggtggagatgatagattcaatatctgtgtcaaaagaatcgatgtcacatctgaaagctg  28989400  Previous    Next  AGI:  At1g77140.1    Description:  VPS45 (VACUOLAR PROTEIN SORTING 45); protein transporter. Identical to Vacuolar protein sorting-associated protein 45 homolog (VPS45) [Arabidopsis Thaliana] (GB:O49048;GB:O80650); similar to SEC1A, protein transporter [Arabidopsis thaliana] (TAIR:AT1G02010.1); similar to hypothetical protein OsI_006901 [Oryza sativa (indica cultivar-group)] (GB:EAY85668.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60878.1); similar to unknown [Populus trichocarpa] (GB:ABK95147.1); contains InterPro domain Sec1-like protein; (InterPro:IPR001619) Range:  from: 28988919    to: 28992877    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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