Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------ZAT14                       --------->ZAT18                       --------->ZAT14    =================================================================================MADS_MADS    --------------->AGL15                 --------->ANAC46    <---------------AGL15  <---------DAG2 --------->ANAC55(2)   ----------------->AGL1  <----------DOF2<---------ANAC55(2)        <---------------AGL15          <   <-----------------AGL1------->TEIL     --------->ANAC58       <---------GLK1(1)        --------->REM1(2) <-----------GT1       <---------ZAT18    --------->ANAC58<---------AHL20(2)           <---------ANAC58 ------GLK1(2)       --------------->AtSPL8              --------->AHL20(2)            <---------ANAC58 -->ANAC46        ---------->DOF2       <-----------GT1 <---------YAB1                 <---------ANAC46   aattttcaattttgggtaaacaaagtgtacttttttcttgaattacgaaattttgtttattatatagatttctgaaataagagacttatgcgtgtacata  28975300                                                                                                    -                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                   <-              ----------->GT1                                                                   -----            --------->ANAC55(2)                                            --------->LBD16      <----           <---------LBD16         <---------AtLEC2                      <---------LBD16        <----          <-----------GT1          <---------ANAC58                     <-----------------AGL1  -----       <---------YAB1              <---------ANAC46                     <---------LBD16         <----     <---------ICU4        --------->GLK1(2)                           <-----------GT1         <-----     --------->ATHB12      <---------ARR11(1)                   <---------ARR11(3)     <---------GLK1(2)     --------->YAB1        <---------ARR14(2)                   --------->ARR11(3)     --------->ARR11(3)    <---------YAB1    --------->ANAC58       <---------YAB1  --------->AHL20(2)        <---------ARR11(3)    --------->ICU4    --------->ANAC58  ----------->GT1      <---------AHL20(2)      ----------->ARR10 ---------TOE2(3)   ---------->DOF2<---------ANAC58         --------->YAB1--------->LBD16      <-----   ttgagaatgattatacgggttacaaagcaaatctattgcatgaagttattctaaatattctattaaaatctttttcccggtttggattagattttcaata  28975400    -------->HAHB4    <---------ICU4    --------->YAB1   --------->ICU4   <---------ATHB51 -------->AHL20(2) ---------AHL20(2) ------->AHL20(2) --------AHL20(1) --------AHL20(2) ---->ATHB51                                          <---------AHL20(2) -----ICU4                                           --------->AHL20(2) ----ATHB1                                           <---------AHL20(1) ---->AHL20(2)                                       <---------AHL20(2) -----AHL20(2)                 ----------->GT1   --------->AHL20(2)             <---------AHL20(2) ----ATHB12                ---------->DOF2       <---------AHL20(2)<---------YAB1   --------->YAB1  < ----ATHB51      --------->AHL20(2)     <---------ATHB12     <---------YAB1    --------->AHL20(2)   -   atttaattatgaagttgaattaaaaaaaaaaaagagtaacaaatcaacttattaattaattttaaaattgtgatgagtctatttaatgagaattttagag  28975500                 --------------->AGL15                 <---------HSFB2a(2)                 --------->HSFB2a(2)                <-------TEIL                ----------------->AGL2                ----------------->AGL1            <---------------AtSPL8        --------->ATHB12        <---------ICU4        -------->HAHB4                                                                       --------        --------->YAB1                                                                       <-------       <---------YAB1                                                              <---------ATHB12       --------->ICU4                                                             ------>MYB46(1)     --------->YAB1                                                               ------>MYB83     <---------ICU4                                                              --------->WOX13(1)    --------->ICU4        ---------->DOF2                                    <-----------GT1---------  --------->YAB1----------------->AGL3       --------->GLK1(1)      --------->At4g35610   --------->YAB1 ---------AHL20(2)    ---------->DOF2        <---------GLK1(1)      <---------At4g35610  <---------AHL20(2) -------->AHL20(2)--------->LBD16<----------DOF2                   ----------->RAV1(1)  --------->AHL20(2)   attaaaataatgatgaggtccagaaaaagaaagtgctttatatatagatttccaactatatatgtatagcagcagtattttaccaatctatataataatc  28975600                                                                             --------->ANAC58                                                                             --------->ANAC58                                                                             --------->ANAC46                                 --------->MYB52(1)                         ------->GAMYB                              <---------At4g35610                          <---------ALFIN1                         <---------------------WRI1                      ----------->RAV1(1)                        --------->MYB52(1)                               ------>MYB83                     --------->YAB1                                      ------>MYB46(1) ->YAB1            --------->AHL20(2)--------->MYB52(1)                 --------->ANAC46        *TSS --ICU4       ------------>CBF--------->At4g35610                   <-----------GT1         --------- >ICU4     ---------->DOF2   ------->TEIL----------->GT1         ----------->TBP            ---------   actaatccctccctaatgcaatttcataacgaagctaactaaggggtaatctcgtcaacaagtctctatataacccaacacacaaacatttggcacataa  28975700                                                                                   <---------bZIP60(2)                                                                              --------->ALFIN1                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                            <---------ANAC46 --------                                                                            <---------bZIP60(2)                                                                           <-----------------------TaNAC69(2)     ------>MYB46(1)                           --------->YAB1           --------->At5g28300<---------ALFIN1     ------>MYB83                             <---------YAB1          --------->ANAC46    <------NtERF2 >ANAC58                 >>>>>>>>>TBF1   ---------->DOF2           <---------REM1(2)     ------>NtERF2 >ANAC58<---------------AtSPL8     ---------->DOF2--------->MYB52(1)<---------ALFIN1 --------->bZIP60(2)   cttaacctacatagtacataccaagaagaagaagaggcaaagaaaaagatgataacgggaaacgaattctacacggtgatgtgtgccatggcaccactct  28975800                                                        <------NtERF2                                                     --------->RAP2.3(1)                                                     --------->RRTF1(1)                                                     <------NtERF2                                                     --------->ATERF1(1)                                                    <---------ERF1                                                    --------->LBD16                                                    <---------ATERF1(1)                                                    <---------DEAR4(2)                                                    <---------ORA47(2)                                                    <---------DEAR3(2)                                                    ------>NtERF2                                                    <---------RAP2.3(1)                                                   <---------ATERF1(2)                                                   --------->ATERF1(2)                                                   <---------RAP2.3(2)                                                   <---------DEAR3(1)                                                   --------->DEAR3(1)                                                   <---------RAP2.3(3)                                                  <---------LBD16                                                  --------->ATERF1(1)                                          <------ZmHOX2a(2)                                         --------->ARR14(2)                                         <---------ARR11(3)                             --------->DAG2     --------->ANAC58            <---------MYB52(1)                         ----------->GT1 --------->ARR11(3)      --------->LBD16                        ------>ZmHOX2a(2)<---------ARR14(3)     --------->HSFB2a(2)                      --------->ARR14(2) --------->ARR14(3)     <---------ANAC46               ------               <---------ANAC58          <-----------ARR10 --------->HSFB2a(1)                 <-----               <---------ANAC58          --------->AGP1------>NtERF2   <-----------GT1         <-----               <---------ANAC46 --------->ALFIN1--------->ANAC58--------->ANAC55(2)           -------          <---------ANAC58  --------->ZAT14     --------->ANAC46<---------HSFB2a(2)        <---------          --------->MYB52(2)<---------ZAT14  <---------REM1(2)  <---------ANAC55(2)     --------->ARR14(2)          <---------ANAC58  ---------->DOF2------>ZmHOX2a(2)   <---------LBD16          <---------ARR14(2) ->ANAC46<-------TEIL <---------ARR14(2) <---------ARR14(2)<---------HSFB2a(1)         <---------MYB52(1)   acttcgccatgttcgtggcttatggatcggtaaagtggtgcaagatcttcacgccggcgcaatgttccggaatcaaccgttttgtctccgttttcgccgt  28975900                                                                                  --------->ARR14(3)                                                                                  <---------ARR14(3)                                                                   ------>NtERF2  --------->ARR11(3)                                                                   ----------->RAV1(1)                                                                  --------->RAP2.3(3)                                                                  --------->DREB2C(2)                                                                  --------->DEAR3(1)                                                                  ----------->HVH21                                                                  <---------ETT(1)<---------ARR11(3)     ------>ZmHOX2a(1)                                            --------->DEAR4(1)   --------->ZAT14                                                --------->ANAC46--------->GLK1(2)   <---------ZAT18            --------->MYB46(3)                  --------->At1g77200 >NtERF2            --------->At4g35610                          --------->RAP2.3(1) ------HVH21        <---------At4g35610                        --------->ANAC46   --------->ARR14(2) ----SPL7      --------->ANAC46 -------->P                    ------>ZmHOX2a(1)   <-----------ARR10 -->DEAR3(1)   --------->bZIP60(2)                      <-------TEIL    <----------DOF2 --GT1   <----------DOF2 --------->ANAC46             --------->YAB1 <---------ALFIN1   cccagtcctctctttccacttcatctcacaaaacaacccttacaaaatggacacaatgttcatcctcgccgacactttgtccaaaatcttcgtcttcgtt  28976000                                 --------->ABI4(2)                                 <---------MYB46(3)                                <---------AtMYB61                               <---------MYB52(1)                             <---------DEAR3(1)                             <---------DREB2C(2)                        ---------->DOF2--------->ATHB12    --------->TOE2(3)            <---------MYB52(1)                <---------MYB52(1)----------------------->TaNAC69(2)            --------->ZAT6   ttgctctctctatgggccgttttcttcaaagccggtggtctcgattggctcatcactctattctcaatcgctactctccctaacactctcgttatgggca  28976100                                                                               --------->ANAC58                                                                               --------->ANAC55(2)                                                                               <---------ANAC55(2)          --------->ANAC58                                                     --------->ANAC58          --------->ANAC58                                                    <-------TEIL          --------->ANAC46                                                    --------->SPL7        <-----------RAV1(2)                                                <------MYB83     <---------ANAC58         --------->ANAC58                             <------MYB46(1)     <---------ANAC58         --------->ANAC58                            <---------------AtSPL3   <- <----------DOF2              --------->ANAC46                        --------->ATHB12    <----------   tacctttgcttcaggccatgtatggagattacactcaaaccctcatggtccaactcgttgttcttcaatgcatcatttggtacgttatcaaattactatc  28976200  Previous    Next  AGI:  At1g77110.1    Description:  PIN6 (PIN-FORMED 6); auxin:hydrogen symporter/ transporter. Identical to Probable auxin efflux carrier component 6 (PIN6) [Arabidopsis Thaliana] (GB:Q9SQH6;GB:O49294); similar to PIN1 (PIN-FORMED 1), transporter [Arabidopsis thaliana] (TAIR:AT1G73590.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60890.1); contains InterPro domain Auxin efflux carrier; (InterPro:IPR004776); contains InterPro domain Auxin efflux carrier, subgroup (InterPro:IPR014024) Range:  from: 28975696    to: 28979497    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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