Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                  ---                                                                                             ------>ZmHOX2a(2)                                                                                            ---------                                                                                            <------ZmHOX2a(2)                                                                                            <--------                                                                                           ------->TEIL                                                                                           --------->ARR11(3)                                                                                           <---------ARR11(3)                                                                                           <---------ARR14(2)                                                                                           <---------AGP1                                                                                          <---------CCA1(2)                                                                                        --------->ANAC46                                                                                        --------->ANAC55(1)                             ---------->DOF2                                            --------->ANAC58                        ----------->GT1            <-----------GT1                      --------->ANAC58 --------->HVH21        --------->ANAC58         <---------DAG2                         --------->ANAC55(2) ------>At5g28300       --------->ANAC58         <----------DOF2                        <---------ANAC55(2) ------->GT1     <------ZmHOX2a(1)            <-----------GT1       ----------->RAV1(1)<---------LBD16 -->MYB52(1)------------------------>ANAC81<---------ICU4 <-----------GT1 --------->GLK1(2)--------->ARR14(2)   ggtgacaatcgcaaaaacaggaaaacaagaaaaaagaacacataaatatcactttacattatacaaactgcaacataatctgtatataacacggatctca  28924000                                                                    <---------AHL20(2)                                                                   <---------AHL20(1)                                                               --------->AHL20(2)              --------->ANAC46                                 <---------AHL20(2)     <---------YAB1                                            <---------AHL20(1)    <-----------GT1                                            --------->AHL20(1) --------AHL20(2)                                        --------->TOE2(3)  --------->YAB1 ------>AHL20(2)                                         --------->TOE1(3) <---------YAB1 >GLK1(1)    <---------HSFB2a(2)                   --------->YAB1  <---------AHL20(2) -GLK1(1)    --------->HSFB2a(2)                  ---------->DOF2  --------->AHL20(2)<----------DOF2   taaaattttcattttccagcaagatgatgaactgtatatgaagagtagcccaaaaatcaccttaattaattaatttgataatagtttctttcattgtaaa  28924100                                                                                                 ----                                                                                                 ----                         <------NtERF2                                                           <---                        ------>NtERF2                                                            ----                        --------->RAP2.6(2)                                                --------->ANAC46                        --------->LBD16                                           --------->ANAC58                      --------->At4g35610                                         --------->ANAC58                      <---------LBD16                                            --------->SPL7  <---                     <---------ATERF1(1)                                       --------->TOE1(2)<----                    <---------DEAR3(1)                                         <---------SPL7   <----                  <---------PCF5                                              <---------ANAC58<------                  <------ZmHOX2a(1)                                          <---------------AtSPL8                 ----------->HVH21                             ----------->GT1<---------ANAC58<------             --------->HSFB2a(2)     <---------ANAC58          <---------ANAC46--------->ZAT18<------             <---------HSFB2a(2)     <---------ANAC46       <------ZmHOX2a(1)--------------->AtSPL3             --------->LBD16         <---------ANAC58    <-----------RAV1(2) --------------->AtSPL8            <---------LBD16         <------NtERF2     <------ZmHOX2a(1)      <---------------AtSPL3            <---------HSFB2a(2)<---------TOE2(3)  ------>ZmHOX2a(1)         <---------ANAC46 <------NtERF2           <---------LBD16     --------->DAG2    --------->TOE2(3)       --------->ALFIN1  <---------DEAR3(1)   caaattgagactctccgggaggaccgcggcaataaggtggcttgagacattccttaggaacaggagcgtaaataggtggagcgtacgaattagacggcgt  28924200     <---------ALFIN1   ----------->RAV1(1) ----->GLK1(2) --->TEIL                   --------->ARR11(3)                   --------->AHL20(2) ------ARR11(1)           <---------AHL20(2)             <---------At4g35610 ----->ARR14(2)          --------->AHL20(2)  --------->YAB1 --------->At5g28300 ------ARR14(2)          --------->YAB1      --------->AHL20(2)  <---------AHL20(2) -----CCA1(2)   <---------DAG2               <---------AHL20(2) --------->ICU4                      < -----ARR14(1)  --------->TOE2(3)         --------->YAB1 --------->At4g35610                     <--- ---ANAC58   <---------ALFIN1            --------->AHL20(2)----------->GT1       <---------MYB52(1) - ---ANAC58<---------ARR14(2)--------->AHL20(1)  --------->ARR11(3)       --------->YAB1         ----- ---ANAC46--------->ARR14(2)<---------AHL20(1)  <---------AHL20(1) <---------TOE2(3)       <---------ARR14(2)   atctgcaacacagttccaccttatctattatatattgatacaaataataatatatacagagctgtaattaatatttcataactgttatctgtatatacga  28924300                 ----------->GT1                --------->ANAC58                                                                <----                --------->ANAC58                                                                -----            <---------YAB1                                                                      <----     <---------bZIP60(2)                                                                    ---------  ----------->HVH21                                             <----------ID1       <---------ICU4 ---------ANAC55(2)                                         ---------->DOF2     --------->ANAC58----- ---ZmHOX2a(2) ------->TEIL ----------->GT1              <---------YAB1         --------->ANAC58----- -------->ANAC55(2)      --------->MYB52(1)           --------->GLK1(2)       ---------->DOF2   ----- ---->ARR11(3)--------->MYB52(1)                      --------->ICU4   --------->YAB1--------->YAB1   tcatgtgacatgttatgaacggaaacataccagtaaaaacaactcgagcatgggagattatgaaaagagccaagaatgagaaaagcatcatcacaaggag  28924400                                                                              ------->TEIL                                                                       <---------YAB1                                                                       <---------WOX13(1) -----HSFC1(2)                                                  <---------AHL20(2) ---->ZAT2                             *TSS                     --------->AHL20(2) -----HSFB2a(1)            --------->AHL20(2)<----------DOF2   --------->AHL20(2)    --------->ICU4 >ANAC46       <---------ANAC46     --------->ARR11(3)    <<<<<<<<<GATA-1 <---------------AtSPL8 ---->At4g35610<---------ANAC58     <---------ARR11(3)   <-----------GT1  --------------->AtSPL8 ---->HSFC1(2)---------->ID1       --------->RVE1(1)  <---------AHL20(2)  <---------TOE2(3) ---->HSFB2a(1)<---------ANAC58    --------->CCA1(1)<---------YAB1  <---------AHL20(2)        <------   cttcgatgaactacttggcgttttagccattaaacaaatatctctctctttcttatttttatctatttatttgattaatgtactctacttattaagaaca  28924500                                                                      <----------DOF2                                                                     ------>ZmHOX2a(2)                                                                   <---------ARR11(3)                       ------>ZmHOX2a(1)                           <---------ARR14(2)                   --------->ARR14(2)                              <---------AGP1                   <---------ARR11(3)                              --------->ARR14(2)                   <---------ARR14(2)                              --------->ARR11(3)                   --------->ARR11(3)                             <---------CCA1(2)                --------->YAB1              --------->LBD16      <---------MYB46(3)             --------->YAB1               <---------LBD16     <---------ANAC46           ------------>CBF      ------------>CBF            <---------AtMYB61          <-----------GT1     ------>ZmHOX2a(1)        --------->ARR11(3)             --------->YAB1 -----------AG  --------->AHL20(2)       <---------LBD16     <-----------RAV1(1)<-----------GT1   catttgggaaatttacaataatatcctccgtccttcccaatccctcgggagataatagaccttgtggtggatctttgtctatttacaatcacatacttat  28924600                                                                                                 ----                                              --------->AHL20(1)                                 <---                                              <---------AHL20(1)                       <---------ANAC58                             ------>ZmHOX2a(1)<---------ARR11(3)                       <---------ANAC58                           <---------ICU4     --------->ARR11(3)                       <---------ANAC46                           ------>ZmHOX2a(2) --------->CCA1(2)                       --------->ARR11(3)                    --------->MYB52(1)      <---------ARR11(3)                   <---------AHL20(2)                 --------->At4g35610        --------->ARR11(3)                   --------->AHL20(2)              <------ZmHOX2a(2)        --------->CCA1(2)                 --------->CCA1(2)       <---              ======================HOX2a_HOX2a  <---------AHL20(2)     --------->ARR11(3)       ----             <---------ARR11(3)       <---------ARR11(3)   <-----------GT1      --------->AHL20(2)<--             --------->ARR11(3)       --------->ARR11(3)<---------ZAT6  <---------ARR11(3)      -----   gtgagaaattttgtagatcatctaactgatccttacatgagatatagatatatttttagtgtaactattttgtagatatagattaaatttcttgtgaaat  28924700                                      <----------DOF2                                     <---------ANAC58                                    <------NtERF2                                <---------ANAC46                                <---------bZIP60(2)                             <---------ANAC58                             <---------ANAC46                             <-----------RAV1(1)             <---------TOE1(3)  <---------MYB46(3)             <---------TOE2(3) <---------AtMYB61 ----->AHL20(2)              <---------ANAC58 ------AHL20(2)          <---------ANAC58 ------AHL20(1)          <---------ANAC58                              <-------TEIL ----->AHL20(1)       <<<<<<<<<<GT-3b<---------ANAC58                 --------->AtLEC2 -------AHL20(2)    <---------YAB1<---------RAP2.6(2)   <---------AHL20(2)           --------->ZAT14 ---->AHL20(2) ----------->GT1 --------->ALFIN1        --------->AHL20(2)------->TEIL<---------ZAT14   taattttgtatttttaagggttatttttcttgtgtggtggcttttcattttagacgatttatttggaactacatgcattttcaaaactgtagtgactaat  28924800                                                    <---------AtLEC2                                                   <-------TEIL                 <-----------GT1                                     --------->ANAC58                         <-----------HVH21                                     --------->ANAC58                      <---------ANAC58                          ------->TEIL----------->RAV1(1)                  <---------ANAC58        <-                  <---------At4g35610--------->ANAC46                    --------->ARR11(3)     -----   cgacatggacatatcaatgctgctatcgaacctctctatacgacataaatatgtgcatggagcatcacacaaaaatgtcttgtcactccctactagtagt  28924900  Previous    Next  AGI:  At1g76955.1    Description:  Expressed protein Range:  from: 28923704    to: 28924439    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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