Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                              -------                                                                                      <---------PCF2                                                                  --------->AHL20(2)  --------->TCP15(1)                                                                 <---------AHL20(2)   --------->TCP20                                                                 --------->AHL20(2)  <------MYB83                                                              --------->AHL20(2)     <------MYB46(1)                                                             --------->AHL20(2)     <---------MYB46(3)                                                             <---------AHL20(2)     --------->MYB55(2)                                                        --------->TOE2(3)          <---------ANAC46                                                       --------->YAB1--------->AHL20(2)       <------   <---------MYB52(1)                                  ----------->GT1             --------->ALFIN1 < ->AHL20(2)                                           <---------ATHB12   ---------->DOF2     -------- --AHL20(2)          <-------TEIL                   --------->WOX13(1)--------->AHL20(2)     --------   tttcagttatttcaaaattcaaattcatactctacccatagtgactaccaaaatcaatcgtaaataaataaataaaaaagaaatggtgggtccaaatatc  28861700                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                  <--    <-------TEIL                                                                                ----- -->ARR11(3)                                                                                  ------>NtERF2 -->ARR14(2)                                   --------->CCA1(2)                              <------NtERF2 ---ARR11(3)                                  <---------ARR11(3)                             -------- ---------YAB1                                --------->ARR11(3)              ------>ZmHOX2a(1) <---- ->CCA1(1)            <----------DOF2     ---------->DOF2               <<<<<<<<<TBF1        -------- ->RVE1(1)         <-----------GT1 --------->ZAT6                    <<<<<<<<<TBF1           --------   ttctgatacattggacataaataacttttgtgatttgtcactaaaaaagatttagaaacaagactctcttcttcttcttcctctaaatgttttgtccgcc  28861800 -------->ANAC55(1) -------->ANAC58 -------->ANAC46 -------->ANAC55(2) -------->ANAC58 -------ALFIN1 ------>RAV1(1)              <---------CCA1(2) ->ANAC58                    ---------->ID1                                                       <-- -----ALFIN1          <---------ARR11(3)                                        <---------ATHB12<---- ->ANAC58             --------->ARR11(3)                        <---------GLK1(2)        ---------->DOF2 ->ANAC46            --------->GLK1(1)           <---------CCA1(2)          ------------>CBF   <-----   acacgcattgtctcagtgatcagagttcttcgtctctctacttgaactctcatctctaaaaccctagactctctcgtcttcaatcgttttaaaaaggtcc  28861900                                                                                            <--------                                                                                           <---------ANAC58                                                                                           <---------                                                                                           <---------ANAC58                                                                                          --------->ATHB12 -------MYB52(1)                               <----------DOF2                       <---------ZAT6 -----ANAC46            ---------->DOF2   ---------->ID1                     --------->ARR14(2)  <--- --TEIL  <---------AtLEC2  --------->YAB1<-----------GT1                     <---------ARR14(2)<-----   gtttagttttagcatgaaattttctctaaagataagttttttttttcgtcttttgttagcgatgttttatagtttatcgaattcgtagtgtttgattgcg  28862000                                        ----------------->AGL3                                   --------->MYB59 -WOX13(1)                         <---------TOE1(3) ---CBF                       --------->ATHB12                    ---------->DOF2 ---------CBF            ------>ZmHOX2a(2)           --------->GLK1(1)                            <-- ----YAB1          <----------DOF2 <---------TOE2(3) <---------GLK1(1)            <------ZmHOX2a(1)<-   attgctctgtttacaagcttactttgatcggatgatttaggtttcatatttggagaaatccatctaagaaaagtttgattttgaggagaaagactgaatt  28862100                                                                                                 ----                                                                     ----------->ARR10          <----                                                                   <----------DOF2             ------                                                              <------ZmHOX2a(1)                ------                                                            --------->ANAC58                   ------                                                            --------->ANAC58                   ------                          --------->HSFB2a(2)           --------->ANAC46                       <-----                          <---------HSFB2a(2)           --------->ANAC58                       <-----                <---------GLK1(2)----------->GT1        --------->ANAC58                       <----- -------YAB1    --------->ARR11(3)                    <---------ANAC58                        <------ --------AHL20(2)      <----------DOF2                <---------ANAC58 <---------GLK1(2)      -------   tttattttctctgattcagatttttcttttggaaactgtagaaatggaaggaaattgctcgcaaggacgctttgattctcaagtttcttctatgagagat  28862200                                                                                     <-----------TGA1                                                                                     <-----------HVH21                                                                                    --------->ANAC55(2)                                                                                    <---------O2                                                                                    --------->ANAC46                                                                                    =================                                                                                    --------->ANAC55(1)                                                                                    --------->O2                                                                                    --------->bZIP60(2) -->ZmHOX2a(2)                                                                      --------->ANAC58 --ZmHOX2a(2)                                                                       --------->ANAC58 --->ARR14(3)                                                                       --------->TGA1a --->ARR11(3)                                  <---------HSFB2a(2)                  <---------TGA1a --->ARR14(2)                              --------->ARR14(2)       --------->ZAT6<---------ALFIN1 --->AGP1                                  <---------GLK1(2)      <-----------GT1<-------TEIL ----ARR11(3)                         ------>MYB46(1)          ===============================bZIP_DOF ----ARR14(2)           --------->YAB1------>MYB83   --------->ANAC58           --------->CCA1(2) ----ARR14(3)         --------->GLK1(2)    <---------ARR14(2)  <----------DOF2 <---------ARR14(2) <-- ---GLK1(1)       --------->YAB1      --------->AtLEC2    <-----------RAV1(2)  --------->ARR14(2) --- -->GLK1(1)    --------->WOX13(1)   --------->AtMYB61--------->ANAC58       <---------TOE2(3)    ----   cttcgtccaaatgctataaatcagaatcagaaacaacaccatccaaattctcgacaagactcaggctttaacaatactatggatacacgtcacaacaatg  28862300                   --------->ATHB12                                                             -----         --------->ANAC58                                                                     -------         --------->ANAC58                                                                    ------->MYC3       ---------->DOF2                                                                       <-------MYC3      <------ZmHOX2a(1)  --------->ICU4                                                     <-------- =================bZIP_DOF                              ----------->GT1                     <-------- -------ETT(2)    <---------ATHB12                  --------->ICU4      --------->ANAC46    <-------- ------>ETT(2)  --------->WOX13(1)        <---------MYB46(3)            --------->ANAC58    --------- ----->DDF1   <---------ATHB12        <---------YAB1<---------ZAT6      --------->ANAC58    ---------   tcgacagaggaaagaaatcaatgagtgaagatgatgaactatgtttgttaagtagtgatggtcaaaacaagtccaaggaaaactctccttggcaacgtgt  28862400                             <---------YAB1                           --------->YAB1                                                           -                           -------->HAHB4                                                           - ------>HVH21              <---------ICU4                                                          <- ---->GT1                 --------->ICU4                                                        ----- -ANAC46                  <---------YAB1                                                      ------- -TGA1a                   <---------ATHB12                             --------->ANAC58 <---------HSFB2a(2) -O2                     <---------TOE2(3)                             --------->ANAC58 --------->HSFB2a(2) >O2                 <---------At4g35610  <---------------AGL15   <---------YAB1   <---------ARR14(2) >TGA1a          <---------REM1(1)    <----------DOF2    --------->GLK1(2)         --------->ARR14(2)   gaaatggatggataagatggtgaagctaatgataactgctctttcttatatcggtgaagactctggttctgataagaaatttgcagttttgcagaagaaa  28862500                                                      <------NtERF2                                                     <------NtERF2                                                     <---------At4g35610                                                     ------>NtERF2        <---------ARR11(3)                           --------->LBD16        --------->ARR11(3)                           --------->At4g35610       <---------GLK1(1)                            --------->DEAR3(1)   --------->ALFIN1                                 --------->ANAC46             --------->YAB1 -------->MYB111(2)                                --------->RAP2.3(1)           ------>ZmHOX2a(2) -------->MYB111(1)                         <---------YAB1                     --------->ARR11(3) -------P                                 --------->YAB1                       <---------ARR11(3) ---->DAG2        ---------->DOF2        <---------YAB1                       --------->YAB1 --->DOF2<------ZmHOX2a(2)     ---------->DOF2     <---------LBD16          <---------TOE2(3)   ggtaagtggagatcagtttctaaagtcatggatgaaagaggttatcatgtttcgccgcagcaatgtgaagataagtttaatgatcttaataagcggtata  28862600  Previous    Next  AGI:  At1g76870.1    Description:  similar to transcription factor [Arabidopsis thaliana] (TAIR:AT1G21200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43641.1) Range:  from: 28862144    to: 28863301    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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