Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ------>ZmHOX2a(1)                  --------->YAB1          --------->ZAT14                  <---------ICU4     ------>ZmHOX2a(1)                  -------->ATHB1    --------->TOE1(3)             ------------>CBF <---------ANAC58             <---------YAB1   <---------ANAC46           --------->YAB1<---------ICU4   --------->ZAT18    ----------->GT1    <---------ANAC58   <---------ZAT18                                       <----   <---------TOE2(3)   <---------ANAC58---------->DOF2                 <------------CBF         -----   --------->DAG2<---------ATHB12   --------->TOE2(3)                <---------YAB1   --------->AHL20(2) ---ZmHOX2a(1) --------->WOX13(1) <---------YAB1                  --------->MYB46(3) <---------ATHB12 ----TOE2(3)--------->TOE2(3) <---------ANAC58       <-------TEIL <-----------------AGL3  <---------ICU4   gaaataaggtgaatcatcaatcattccttatggcttatccttaatgcactcttgattcattttcttcaactactattggagcctcaaatgaattatgtct  28852400             --------->WOX13(1)           ------------>CBF       <---------ANAC58       <---------ANAC46       <---------ANAC58   <---------GLK1(1)                 <---------ICU4   --------->GLK1(1)               ------->TEIL                           ------------>CBF<----------DOF2 -----HSFB2a(2)                   <---------CCA1(2)              <---------ANAC58         <---------DAG2 ---->HSFB2a(2)           <---------At4g35610       ------->GAMYB<---------ANAC58<---------HSFB2a(2)   cgaagagttccttgtcaatctaacatttagcttcttgaatcttgacattttcaacagaggctccatttcgttcacagtcaatactggaacaacttttctg  28852500                                                                   <---------ICU4                                                                   <---------AHL20(1)                                                                   <---------AHL20(2)                                                                   --------->YAB1                                                                   --------->AHL20(2)                                                                   <--------ATHB1                                                             --------->ANAC55(2)                                                             ----------->GT1                                                      <-----------HVH21                                                     <---------bZIP60(2)                                                     <---------ANAC55(2)                                                     --------->ANAC46                                                     --------->O2 <---------ATHB51                                <---------ARR11(3)   <---------O2 --------->ICU4               <---------HSFB2a(2)                   <---------TGA1a  <---------AHL20(2)               --------->HSFB2a(2)                   --------->ANAC55(2)           <---------ANAC58     --------->ARR11(3)   --------->TGA1a  --------->AHL20(2)  <---------AHL20(2)           <---------ANAC58    <---------CCA1(2)     --------->bZIP60(1)                  --------->AHL20(2)      <---------ICU4          ------->TEIL           <---------bZIP60(1)                 --------->AHL20(2)      --------->ATHB12     ----------->GT1  <------ZmHOX2a(1)--------->ANAC58       --------->TOE2(3)  <-----------GT1     --------->YAB1       <----------ID1    --------->ANAC58     --------->GLK1(2)   tgaattactcattgcttccagtattcaaaatgtatatctcagagaaggacaaatcacgtcgcaacgtaataattttttgcaaataatctaaattaatcta  28852600                                                                                      ----------->GT1                                                                                      --------->LBD16                                                                                   --------->MYB52(1)                                                                                  <---------ALFIN1                                                                                  --------->ANAC46                                                                                --------->AtMYB61                                                                                <---------ALFIN1                                                                               --------->bZIP60(2)                                                                               --------->MYB46(3)                                                                              ------>NtERF2   <------                                                                          --------->ANAC58    <------                                                                          --------->ANAC46 <---------ARR11(3)                                                                    --------->WRKY18(1)    --------->ICU4                                                                   <-----------HVH21<---------LBD16                                                                  ----------->GT1--------->ZAT14               --------->AHL20(2)                               <---------LBD16--------->ANAC46    <-            <------ZmHOX2a(1)                    ------>ZmHOX2a(1)--------->LBD16<---------ZAT14   <-          <---------TOE1(3)           <---------ANAC58        <-----------GT1--------->RAP2.6(2)<----          <---------TOE2(3)           <---------ANAC58    ------>MYB46(1) --------->ANAC58 --------->AHL20(1)    --------->ICU4                    <---------ANAC46    ------>MYB83   --------->DAG2    <---------AHL20(1)    <---------YAB1              --------->ARR11(3)      <---------MYB59 ---------->DOF2    --------->ARR11(3)   agagtcatttttgaggataaaatcgagttactgacatcttgtgtgtctgtccttcataccaaattatccggtcaaaaagccaccacaccggaaaatatta  28852700                                                                                                 ----      --------->YAB1                                                                             ----     <---------YAB1                                             <---------HSFC1(1)        <---------- ---YAB1                               <---------DAG2           --------->HSFB2a(2)     <---------YAB1 ---AHL20(2)                   ------->MYC3                     <---------HSFB2a(2)    <---------AHL20(2) ----------GT1                 <-------MYC3    --------->TOE2(3)--------->HSFC1(1)     --------->AHL20(2) --------AHL20(2)        <-----------GT1<----------DOF2        <---------LBD16        --------->AHL20(2) -----AHL20(2)     <---------YAB1   <-----------GT1   ------------>CBF        <----------ID1 <-------   ttttcttatcatcgccatgttttgatttttccacgtttacaccttttaatctaaaaatcaatatttctggaagaaaaaaaaaaacaaattaaaattgtca  28852800                                              ===============================HOX2a_HOX2a                                              ------>ZmHOX2a(2)                                             *TSS                                             <------ZmHOX2a(2)                                             --------->GLK1(1)                                             ================================HOX2a_HOX2a                                            --------->ARR11(3)                                            <---------AGP1                                            --------->AGP1            =================HOX2a_HOX2a                                            --------->ARR14(2)        <------ZmHOX2a(1)--------->At4g35610                                            <---------ARR11(3)        =====================HOX2a_HOX2a ----->ANAC58                               <---------ARR14(2)     --------->ATERF1(1) <---------At4g35610 ----->ANAC58    --------->TOE2(3)         <---------CCA1(2)       <------NtERF2<------ZmHOX2a(2)---- --CBF        <---------GLK1(1)     <---------GLK1(2)            --------->ALFIN1      ----------->RAV1(2) ----HVH21    --------->GLK1(1) ---------->DOF2                  <---------DEAR3(1) <------ZmHOX2a(2)   cacaaatcacaaactgaaatctcaaaatcgaaactaaagcttctcagatctctaactatagctcaaggcggaggagactgagatcgatcatctgaatcgc  28852900                                                                                       --------->YAB1                                                                                     ------>MYB83                                                                              ------>ZmHOX2a(2)                                                                              =======================                      <---------ARR11(3)                                     <------ZmHOX2a(2)                     --------->YAB1                              --------->ANAC58    ------>MYB46(1)                    --------->ICU4                               --------->ANAC58    --------->MYB52(1)       <---------ANAC58                                  ---------->DOF2     ========================       <---------ANAC58 ------>ZmHOX2a(2)            <-------GAMYB          <---------ARR11(3)       --------->ETT(2) <---------ICU4              <---------ANAC58        --------->ARR11(3)     <-----------HVH21--------->ARR11(3)            <---------ANAC46       <---------GLK1(1)        - ----->ANAC46       <---------ATHB12                <---------ANAC58       --------->GLK1(1)      ---   cgaaacatgtcgagcgatagcaatgatcttgacgaagatgagcttcttcaaatggcgttgaaagagcaggctaagagagatctcacctatcagaaacctc  28853000                                                                            <---------ATERF1(1)                                                                           --------->ARR14(2)                                                                           <---------ARR14(2)                                                                          ------>NtERF2                                                                          --------->At4g35610                                                                          <---------At4g35610                                                                       <---------At4g35610                                                                      <---------ATERF1(1)                                                                     --------->ATERF1(1)                                                                    --------->ZAT2                                                                    --------->At4g35610                                                                    <---------ZAT2                                                                    --------->ATERF1(1)                                                                   <---------RAP2.3(1)                                                                   ------>NtERF2                                                                  <---------RAP2.6(2)               -                                                                  <---------ANAC46                  <                                                                  <---------RAP2.3(2)               <                                                                  <---------DEAR3(1)               <-                                                                 <------NtERF2 --------->LBD16    <--                                                                 <---------At4g35610             <---                                                                 <---------LBD16                 <---                                                                 --------->At4g35610             ----                                                                 --------->ATERF1(1)             ----                                                                <---------RAP2.3(1)             <----                                                                <---------ERF1 ------>NtERF2    <----                                                                <---------ATERF1(1)            ------                                                ----------->RAV1(1)<---------ATERF1(1)         <-----                                                ================================RAV            <-----                                     --------->ZAT2            <---------DEAR3(1)--------->DEAR3(1)<-                                     <---------ZAT2            <---------RAP2.3(3)            <------                                     <---------At4g35610  ======================RAV         <--------                                     --------->At4g35610  <-----------RAV1(1) --------->DEAR3(1)<----               --------->ANAC58   <---------ZAT18       ----------->RAV1(2)<---------ALFIN1 ---------        <---------At4g35610       --------->ZAT18   --------->At4g35610------>NtERF2        <-------- ====HOX2a_HOX2a        ----------------->AGL1  ====================RAV<---------ATERF1(1)  --------- ====HOX2a_HOX2a    <-------GAMYB --------->ZAT14<---------At4g35610<---------At4g35610     --------- -------->REM1(1)  <-----------RAV1(1)      ----------->HVH21<---------MYB46(3)--------->At4g35610--- --->ZmHOX2a(1)--------->ANAC58   <---------ZAT14--------->At4g35610----------->RAV1(2)    <---------   cttcatcttctgctcgtaagcctgttgccaatttagtgcagcagcctcgacagcagaagcctgtggctgcggctgccgctccgccgaagaagtctgctgc  28853100    --------->MYB59  <---------MYB52(1) <-------GAMYB -------->MYB55(2) ---------MYB46(3) ---------DEAR3(2) --------ANAC46 ----NtERF2 ------RAP2.3(1) ------RRTF1(1) -------->AtMYB77 -->NtERF2 -----RRTF1(2) -----DEAR3(1) --->At4g35610 ----LBD16 ----At4g35610 --------DEAR3(1) -----RAV1(1) -At4g35610 -----RAP2.3(2)                                                          --------->ATHB12 -->RAV1(2)                           <---------AtMYB61                 <---------YAB1 -ZAT2                                <---------DEAR3(1)                --------->ICU4 >At4g35610                          <------NtERF2         <---------ANAC58                         < >ZAT2<------ZmHOX2a(1)  <------ZmHOX2a(1)       <---------ANAC58     --------->YAB1               -- --->NtERF2            <---------TOE2(3) --------->ALFIN1  <---------ANAC58              ----------->GT1 --RAV1(1)     <---------AtLEC2<------ZmHOX2a(1) <---------ANAC58    --------->ICU4   ---------->DOF2   ggcggttaggaagccttccatggatgaggatgaggagtcggaggtggaattgcttagcatttcgagcggggatgatgatttggagagggaaagggaaata  28853200                 --------->LBD16                <---------ANAC58                --------->ALFIN1                <---------ANAC46              <---------ANAC46              --------->ALFIN1             <---------SPL7            <---------MYB46(3)           <---------AtMYB61           --------->ALFIN1           <---------DEAR3(1)         <---------MYB46(3)        --------->ALFIN1        <---------ZAT6                                                         <---------ANAC46        <-----------RAV1(1)                                                    <---------ANAC58        <---------AtMYB61                                                     <---------MYB46(3)   --     >>>>>>>ZML2<---------ANAC58                                       <---------YAB1 --------->ALFIN1 ---------MYB46(3)       <------ZmHOX2a(1)                           <---------At4g35610   <------ZmHOX2a(1) ------->ALFIN1<---------LBD16         <---------SPL7         <------ZmHOX2a(1)<---------ANAC58   <--   ggtggttctagtggtggtgcggggagaggaagaggtagcgatgtacgagagaagggaagagcgaggaaggaagatgatggtgcttgggatggaggagagc  28853300  Previous    Next  AGI:  At1g76850.1    Description:  SEC5A (EXOCYST COMPLEX COMPONENT SEC5). Identical to Exocyst complex component 2 (SEC5A) [Arabidopsis Thaliana] (GB:Q8S3U9;GB:Q9C6K6); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G21170.1); similar to H0525E10.11 [Oryza sativa (indica cultivar-group)] (GB:CAH66927.1); similar to hypothetical protein OsI_015343 [Oryza sativa (indica cultivar-group)] (GB:EAY94110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43643.1); contains domain EXOCYST COMPLEX COMPONENT SEC5 (PTHR13043) Range:  from: 28852845    to: 28859393    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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