Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->AGP1                             <---------At4g35610                        --------->YAB1                                       ----------->GT1                  --------->ANAC58                                  <---------ICU4         --------->ANAC58      <-----------------AG   --------->At4g35610                    <--------ATHB1         --------->ANAC58 ->YAB1           --------->ANAC58                                  --------->ATHB51   <---------ANAC55(2) -----AGL15     ---------->DOF2          --------->At4g35610       <---------ATHB51    --------->ANAC55(2) ---->AGL15    <------ZmHOX2a(1)       --------->YAB1              <---------ATHB12  --------->AHL20(2)   agaaaaatttcaaaataggaaagctatcatcagctctaccatcagaagaaagtttgaagcttgaattcaataattcatagggtaaaattaagtaagctag  28817600                                                                 <---------ZAT14                                                                 --------->ZAT18                                                             <------ZmHOX2a(1)                                                       <-----------HVH21                                           --------->DAG2 --------->HSFB2a(2)                           <---------ARR11(3)         --------->O2                        -----------                           --------->ARR11(3)         --------->ANAC46              ---------->DOF2                       ---------->DOF2   ---------->DOF2  <---------HSFB2a(2)     --------->ARR11(3)                <----------DOF2    <---------At4g35610<---------O2        <---------MYB46(3)    <----   aattgaacaaaatataagctttggaaaaagatgtttaagcagagaaaggcgattacacgtcgaggagtgcatcgagtcgttgaagataaagatggaaact  28817700                                                                                     --------->GLK1(2)                                                                                    <---------GLK1(2)                                                                               ----------->TGA1                            <---------ARR14(2)                                 ----------->HVH21                            --------->ARR14(2)                               --------->At4g35610                          --------->LBD16      <------NtERF2                 <---------ANAC55(2)                        <---------LBD16    ------>NtERF2                     ----------->RAV1(2)                       --------->MYB52(1)  <---------SPL7               <---------ARR14(2)                       ------->TEIL       <---------RAP2.6(2)           --------->ARR14(2)          -                      --------->ARR14(2)  <---------ATERF1(2)       --------->At4g35610             - >GT1<---------LBD16  <---------ARR14(2) --------->RAP2.6(3)     ---------->DOF2--------->MYB52(1) -- ------DOF2         <---------MYB52(2) ----------->HVH21   ---------->DOF2 <---------ALFIN1        <-   ttaagtctccggttcgaacccgacgaaccggaaactgaaatttgacggccgagatagaacgagaagcgaaagcagaaacacctgacgattctttcgaatt  28817800                                                                                             <------MYB46(1)                                                                                             <------MYB83                                                                                            ---------                                                                                            ---------                                                                                          <---------MYB52(1)                                                                                         <-------GAMYB                                                                                        <---------MYB46(3)                                                                                        <------MYB46(1)                                                                                        --------->MYB52(2)                                                                                        --------->MYB55(2)                                                                                        <------MYB83                                                                                       <---------MYB46(3)                                                                                       <---------AtMYB61                                                                                      <--------P                                                                                      <---------MYB55(1)                                                                                     <-------GAMYB                                                                                    <---------DEAR3(2)                                                                                    <---------MYB46(3)                                                                                    --------->MYB55(2)                                                                                   <---------DEAR3(1)                                                                                   <---------RAP2.6(2)                                                ----------->GT1                 <---------DEAR3(1)  <      <---------ARR14(2)                     --------->GLK1(2)            <---------DEAR3(1)<--------      --------->ARR14(2)                ---------->DOF2          ------>ZmHOX2a(2) <---------DREB2C(2)   --------->ANAC58                   --------->AtLEC2          <------ZmHOX2a(2)  <---------ANAC46 -   --------->ANAC58               ------>NtERF2--------->YAB1  <---------ARR11(3) <------NtERF2    --  <---------LBD16                --------->ANAC46              --------->ARR11(3)------------>AtMYB77 -------->DEAR3(1)               <---------bZIP60(1)       --------->MYB52(1)  --------->ATERF1(1) <- ---------->HVH21                --------->ANAC58         --------->TOE1(2)   <-------GAMYB --------- ------->At4g35610               --------->bZIP60(1)     <---------MYB52(2)  <---------DEAR3(1) <---- --------At4g35610               --------->ANAC58     <----------ID1  --------->ATHB12<---------MYB52(1)   cagcgacggaaccgtagaagaagagagagaaattgacgccatgaaagaatcagaaaaaaacaaacgatctcttgattcggcgttggcggttggttaggtt  28817900  <---------YAB1 >MYB46(2)                                         --------->DAG2 >MYB111(1)                                       ---------->DOF2 ---------ICU4                                 --------------->AGL15                             ---- -AtMYB61                                      <---------------AGL15                         -------- -------->YAB1                                ----------------->AGL1                      --------->HSFB2a(2) ------->ICU4                               >>>>>>>>>>WRKY43                              <---------HSFB2a(2) --------YAB1             ----------->GT1  --------->WRKY38(1)                      --------->ANAC58 >MYB59    --------->DAG2--------->HSFB2a(2)>>>>>>>>>>WRKY38                        --------->ANAC46 ---TEIL  ---------->DOF2<---------HSFB2a(2)>>>>>>>>>>WRKY26    *TSS ---------->DOF2--------->ANAC58   gatgatgacaaaaaaagttggacacttgtggaaaaaaaactcgaattgaccaaaaagagagaacgaactctgaaagaaaatgacacaaggtactagaaag  28818000                              --------->ARR14(2)                              ------->TEIL                              <-----------ARR10                              <---------ARR11(3)                              <---------ARR11(1)                              <---------ARR14(2)                       --------->ZAT18                       <-------TEIL                                    ------->MYC3    <---------YAB1     --------->ZAT14                                 <-------MYC3  --------->YAB1       <---------ZAT14                          <-----------TCP11(1)  <---------ICU4  <---------WRKY12           <-----------TCP11(1)--------->PCF2 <---------ATHB12--------->WRKY18(1)    <---------YAB1        <---------HSFB2a(2)                  <- --------->ICU4 <-----------HVH21<----------DOF2              --------->HSFB2a(2)                  <- -------->CBF--------->ZAT14 <---------CCA1(2)--------->PCF2  >>>>>>>ZML2                   --------- -->DOF2------>ZmHOX2a(2)    <---------ARR14(1)  ----------->RAV1(1)<---------ALFIN1        <--------   acaatgatgatccactacggtcaagtacaccgtatcttttttgttataggcccacaaacatgttctaggcccacatgttataggcccgttcccaaacacc  28818100                                                             <---------YAB1                                                            ------>ZmHOX2a(2)                                                           --------->GLK1(1)                                                           <------ZmHOX2a(2)                                                          <-----------ARR10                                                          --------->ARR11(3)                                                          <---------ARR11(3)                <--------                                                    ----------->HVH21                       ---------                                                  <---------bZIP60(1)                     --------->YAB1                     <---------At4g35610          --------->bZIP60(1)                     <--------HAHB4             <-----------GT1                   ----------->HVH21                          <---------ICU4 -----ZmHOX2a(2)<---------DAG2             --------->YAB1 --------->ARR14(2)             --------->ICU4 --------ATHB12 <----------DOF2           <---------ATHB12<---------ARR14(2)             <---------YAB1 >MYB46(3)  <-----------GT1             --------->WOX13(1)<---------AGP1            ----------->GT1 -MYB55(2) --------->AHL20(2) --------->YAB1 --------->At4g35610                ---------->DOF2   gatcactcttcaatttaactttttgctcacaatcttcaggctcaatcatatgacatgacagatctcattgtaaatgcaatcgcaaagggttatcattatc  28818200                                      ----------->RAV1(2)                                      --------->ZAT2                                  --------->ANAC58                                  --------->ANAC58                                  --------->ANAC46                                ------>NtERF2                               --------->DEAR3(1)                             --------->LBD16                             ------>NtERF2                            <<<<<<<<<<E2Fa                            --------->ANAC46                                       --------->ANAC46                            --------->ANAC58                                       --------->TGA1a                       <---------ANAC58        <-------GAMYB         ========================bZIP_DOF                    <---------MYB52(1)<---------ZAT2                 ---------->DOF2       <---------MYB52(1)                <---------At4g35610------->GAMYB         <---------MYB52(1)        --------->ANAC58           <---------YAB1   --------->ANAC58   ==============================================MYC_MYB -YAB1   ---------->DOF2   <---------LBD16    ----------->GT1 ----------->GT1      --------->ANAC58 >ICU4   --------->YAB1<---------ANAC58   ----------->HVH21 <---------ANAC46       --------->O2     <   aactagtactataaagatagctgttacttcccgccaacgcaactgggacagttaaaaccgttgagggtaacaaaagacaaaactcacgactccgtttttg  28818300                                                                                            <--------               <---------HSFC1(2)                                                           ---------    --------->LBD16   <---------ARR14(2)                                              --------->DAG2    ------>ZmHOX2a(1) --------->ARR14(2)    ---------->DOF2            <---------AHL20(2)   <--------  <---------ANAC46 <---------ANAC46 <---------PCF2    --------->CCA1(2)--------->AHL20(2)--------->ALFIN1 ---------ARR14(2) <---------YAB1  ----------->TCP11(1)          <---------MYB59     ---------->DOF2   agtttcctgaagatggaagttacgaatatgttcttgtgggcctcttcaaagaaacgatatgaaatagcctaatttaaacaaaactagaaaagtgtggact  28818400                                                                                    =================                                                                                    <------ZmHOX2a(2)                                                                                   --------->ARR11(3)                                          --------->At4g35610                      <---------ARR11(3) -ZAT18                                   <---------At4g35610             <------MYB46(1) >ZAT18                             ---------->DOF2    ---------->DOF2    <------MYB83 -ZAT14<----------DOF2          ------->TEIL--------->ZAT18              --------->MYB59       ------   agagagagactttagcaaaaactaaaaacagatgtatcaaaagaagctcacaactaaaaaagatggagcttgaattaggtctgaagatcactcggactaa  28818500  Previous    Next  AGI:  At1g76760.1    Description:  ATY1 (Arabidopsis thioredoxin y1); thiol-disulfide exchange intermediate. similar to ATY2 (Arabidopsis thioredoxin y2), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT1G43560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43620.1); contains InterPro domain Thioredoxin family (InterPro:IPR015467); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain (InterPro:IPR013766); contains InterPro domain Thioredoxin; (InterPro Range:  from: 28816579    to: 28817964    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g76770.1    Description:  heat shock protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G76780.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20 (InterPro:IPR002068) Range:  from: 28818463    to: 28819272    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version