Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <---------------AGL15 --------->ARR11(3)                           <---------YAB1<---------YAB1--------------->AGL15 <---------ARR11(3)              <---------AHL20(2)       --------->YAB1 ----------------->AGL2 -->ANAC58                      <---------AHL20(1)       <---------ATHB12<-----------------AGL3 -->ANAC46                      --------->AHL20(1) --------->ANAC58 --------->ZAT6   -------->P -->ANAC58                     <---------CCA1(2)   --------->ANAC58--------->At4g35610        -------   taagaccttgtctaaaacttctcttcttctcttatatatttatgtgttatgaaacgcctatcatgaattagctctactaaatctagcaacctttcaaatt  28815500                                                                                                 <---           --------->ALFIN1                                                                  ------->MYC2         --------->At4g35610              --------->ATHB12                                   <-------MYC3         <---------At4g35610         <---------DAG2                                          ------->MYC3       <-----------RAV1(2)--------->AHL20(2)                                                 <-------MYC2 -->ARR14(2)           <----------DOF2   <---------YAB1                                   <---------ALFIN1   tgcagtattgcaggtgtctctgtgtctttaaaatagttgccttatgatttcttcggtttcaagatgatcaaatagttatagatttcatgctcacacatgc  28815600                                                   <---------YAB1                                               --------->ARR11(3)                                               <---------GLK1(2)                       -------->P            ----------->ARR10                    <---------ANAC58    --------->ANAC58             <------MYB46(1)                    <---------ANAC58    --------->ANAC58     <---------At4g35610      --------------->AtSPL8 <---------ARR11(1)<---------ARR11(3)    <------MYB83      <---------------AtSPL8<---------CCA1(2)--------->ICU4--------->DAG2 ------YAB1     <----------DOF2         --------->ANAC46  ---------->DOF2   tcattagatgtgtacatactttacttacccaaatctattttctcgcaaagattttgatggtaaagctgatttggttctattgaactaaatcaaacgagtt  28815700                                                          <----------DOF2                                                        <---------ZAT2                                                       ------->TEIL                                                    --------->ANAC58                                                    --------->ANAC58                                                    --------->ANAC55(2)                                                    <---------ANAC55(2)                                                    --------->ANAC46                           ------                                               <---------ICU4                             --------->ANAC46                    ------>NtERF2             <---------ATHB12        <---------ICU4     ------>MYB83                   --------->LBD16          ------>MYB83<---------At4g35610              ------>MYB46(1)                 <---------LBD16            ------>MYB46(1)        ----------->GT1     --------->MYB46(3)      <---------WOX13(1)                  --------->MYB46(3)--------->AHL20(2)      <-----------GT1--   tcagactgagtgattctaatccggcccattagcccctaaacagacccactaattacgcagcttttaatagagtaattacacctagtttacccactaaacc  28815800                                            <---------ANAC46          <---------ICU4                    <---------ANAC58                  --------->WRKY18(1)       --------->YAB1                       <---------ANAC58      --------->AHL20(2)       <---------ICU4                     <---------AHL20(2)     --------->AHL20(2)      --------->ICU4                   <---------ICU4   --------->ANAC46     <-----------HVH21 --->MYB46(3)               --------->At4g35610         --------->ZAT6      ------->GAMYB           < -------->DOF2              <---------At4g35610    <----------DOF2<---------AHL20(2)              ---   actaagcactaattatctcacaatctaatgagcttccctcgtaattacttgggctttcactctaccatttatttgtaacagtcaagtctctactgtctct  28815900                                                  --------->ANAC58                                                  --------->ANAC46                                                  --------->ANAC58                     ------------>CBF           ---------->DOF2           <---------TOE2(3)                   ------->GAMYB          ---------->DOF2         *TSS         --------->AtMYB61       ----------------------->TaNAC69(2)     --------->MYB46(3)  <-----------GT1   --------->ANAC58         -------->P                             --------->WOX13(1) ---------AHL20(2)  --------->ANAC58        --------->WOX13(1)                <---------DAG2 -------->TBP       --------->ANAC46      <---------ATHB12      <----------DOF2   <---------YAB1   atataaactctctaaagttaacacacaattctcatcacaaacaaatcaaccaaagcaacttctactctttcttctttcgaccttatcaatctgttgagaa  28816000                <-------TEIL        --------->GLK1(2)                                                     --------->ANAC58        <---------ARR14(2)                                                    --------->ANAC58        <---------ARR11(1)                                                 --------->At4g35610        --------->ARR14(2)                                       <---------ALFIN1     <---------------AGL15                                     ------>ZmHOX2a(1)      --------->YAB1     --------------->AGL15                                <---------ANAC58 <---------ZAT2       -----    ----------------->AGL3--------->TOE1(3)               <---------ANAC58 --------->ZAT2    -------- <---------ANAC58         --------->TOE2(3)              <------NtERF2----------->HVH21    <--------- <---------ANAC58<---------AtLEC2                      <---------RAP2.6(2) <---------At4g35610  -----   atggcttccaaatctagtttcatggctaccttcaacattgtgactctcatgctcatggtggcttcctccacagtgacagctcgccctctcatgaaaccat  28816100                                                                  <---------At4g35610                               --------->ZAT14                    ----------->RAV1(2)                               <---------ZAT14                    <---------ZAT2                       --------->ANAC58                           --------->ZAT2                    <                   --------->AtMYB61                         <---------ZAT14                    <----                 ------>MYB46(1)                             --------->ZAT14                <--------      ====================MYC_MYB                          --------->ANAC46               -----------      --------->TGA1a  --------->ANAC46                 <-------TEIL                 <---------At4g35610 ->MYB46(1)      -------->P    --------->ZAT18         --------->CCA1(2)             --------->At4g35610 ->MYB46(3)      ------>MYB83 <---------ANAC46        --------->ARR11(3)             --------->ZAT2 - --GT1<---------TGA1a  --------->ANAC58               --------->ARR14(2)             <---------ZAT2<- ->MYB83        ------>ZmHOX2a(1)                     <---------ARR14(2)            ------->TEIL-----   ccatggggacgtcttctcctaccacaagccttgtgtacaggctcaagcttgatgaagatacagggtactgctgggactcactgatgcagctccaacactg  28816200          <---------ARR14(2)      --------->At4g35610      <---------ZAT2      <---------At4g35610 ---------HSFB2a(2)      --------->MYB52(1)                                          <-----------RAV1(1) -----ZAT14 ==================HOX2a_HOX2a                                      --------->ANAC58 -ALFIN1  <---------ARR11(3)                                                   --------->ANAC46 >RAV1(1) --------->ARR11(3)------->GAMYB            <-------GAMYB--------->YAB1     --------->ALFIN1 -------->HSFB2a(2)    ------>ZmHOX2a(1)            <-----------RAV1(1) --------->ATHB12 --------LBD16        --------->TOE2(3)        <---------LBD16 <----------DOF2 --------->ANAC58    -- ---->ZAT14 ------>ZmHOX2a(2)--------->At5g28300    --------->ALFIN1  <<<<<<<<<<<<<<<<<LFY        <--   ttctggagagctgatcttgttcttcctcaacggtgagacttacattggccctgggtgttgcagtgctataagaaccattggacgcaagtgttggcctact  28816300                                            <---------TOE1(2)   <------MYB46(1)                          <---------TOE2(3)   <------MYB83                             <---------TOE1(3) <---------WOX13(1)           ----------->GT1 ------->ATHB12   <---------At5g28300       <---------TOE2(2)       ----------->HVH21--------->ARR11(3) -------YAB1     <-----------GT1   --------->CCA1(2)          <---------ATHB12--------->YAB1       --   atgattggtgttcttggttttactgctcaagaaggtgatatgctccaaggttactgtgatggcaatgactctgacaacaatggtgaagaccatgctcttg  28816400  Previous    Next  AGI:  At1g76740.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G76840.1); similar to cell wall-anchored protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (GB:YP_300225.1) Range:  from: 28810129    to: 28815451    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g76750.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G39340.1); similar to ECA1 protein [Hordeum vulgare] (GB:AAF23356.1); contains InterPro domain Protein of unknown function DUF1278 (InterPro:IPR010701) Range:  from: 28815934    to: 28816615    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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