Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->DREB2C(2)                        --------->DEAR3(1)                        --------->At1g77200                    <---------ABI4(2)              --------->At4g35610              <---------At4g35610             --------->DEAR3(1)                                                 --------->ZAT2            --------->MYB46(3)                                                  <---------ZAT2    <--            <-----------RAV1(2)                                               --------->LBD16    <---            --------->ATERF1(1)                                              <---------ANAC58    <---           <---------At4g35610                                               <---------ANAC58  <-----           --------->At4g35610        --------->ARR14(2)                  <---------ARR14(2) ------>ZmHOX2a(2)           <---------ZAT2  --------->ANAC58                               --------->ARR14(2)<------ZmHOX2a(2)           --------->ZAT2  --------->ANAC58                             ----------->ARR10  --------->ARR11(3)     <---------ANAC58  --------->DEAR3(2)    --------->YAB1          <---------ANAC46      <---------ARR11(3)     <---------ANAC58 ------->TEIL <---------TOE2(3)  --------->AGP1 <---------ANAC58     --------->GLK1(1) <----------DOF2 --------->At4g35610  <---------ARR14(2)             <---------ANAC58     <---------GLK1(1)   aaacttttcttgcagcagccgatgcaccgacgaaattagggattcgatgatgaacaggtctagggctcatagcgtagttccgagcttccatgagatccca  28809300                                                                                                  ---                                                                                                  <--                                                                                                 <---                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              ------>NtERF2                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                     ------>ZmHOX2a(1)                                                                                     ================                                                                                 <---------ARR11(3)                                                                                 <---------ARR14(2)<-                                                                                 --------->ARR14(2)--                                       <---------ARR14(2)                   --------->LBD16 ---------                                       --------->ARR14(2)                   ------>NtERF2   ---------       <---------ANAC46       <---------ANAC58                             --------->ANAC46 ---------      <---------LBD16         <---------ANAC58     --------->GLK1(2)      <---------LBD16   ---------    <----------DOF2        <----------DOF2        <---------GLK1(2)      <---------ATERF1(1)--------- -------ARR11(3)        --------->ANAC46       ------>ZmHOX2a(2)        --------->ARR14(2) <---------ATERF1(1) ------ALFIN1           --------->ANAC58     <---------ARR14(2)    --------->ZAT14  --------->ANAC46< ------CCA1(2)          --------->ANAC58     --------->ARR14(2) <----------DOF2 <---------CCA1(2)---- ----ALFIN1--------->GLK1(1)  <---------ANAC46<------ZmHOX2a(2) --------------------->WRI1--------->DEAR3(1)   catcttctttcggataacccatttccacgctttcgggtcactatctggatccgattctagttccttctttgcagtctccgccatatcctccatcgccgcc  28809400 ------>O2 -------ANAC46 ---NtERF2 ---->DEAR3(1) -NtERF2 --->ATERF1(1) --->DEAR4(2)                                            <---------MYB52(1) --->RAP2.3(1)                                       ------>NtERF2 -->ABI4(1)                                         --------->DEAR3(1) ---ATERF1(1)                                       <---------DEAR3(1) ---RAP2.3(1)                                      <------NtERF2 ->RAP2.3(2)                                       --------->ATERF1(1) ->DEAR3(1)                                       <---------ATERF1(1) --DEAR3(1)                                       <-----------HVH21 ->ANAC46                                         ------>NtERF2                  <---------ARR14(2) ->ATERF1(2)                                     <---------DEAR3(1)              --------->ARR14(2) --ATERF1(2)                                     --------->DEAR3(1)              --------->GLK1(2) ->RAP2.3(3)                                    --------->RAP2.3(1)             <---------GLK1(2)  -- =====================HOX2a_HOX2a               <------NtERF2            --------->HSFB2a(2)       <- ----------HVH21                               <---------ATERF1(1)       <---------HSFB2a(2)   <----- ------->REM1(2)                               ------>NtERF2      ------>ZmHOX2a(2)            ------ >ERF1                                 ---------->DOF2<------NtERF2   --------->GLK1(2)     --------- >ORA47(2)                 --------->At4g35610<---------DEAR3(1)  ==========================HOX2a_HOX2a >ATERF1(1)               --------->ANAC46    --------->DEAR3(1) <------ZmHOX2a(2)         <--------- >DEAR4(2)                --------->ANAC58   --------->ATERF1(1) ===========================HOX2a_HOX2a >RAP2.3(1)               --------->ANAC58  <---------ATERF1(1) --------->ARR14(2)      --------->At4g35610 ------NtERF2  <------ZmHOX2a(2)   --------------------->WRI1   <---------ARR14(2)   ------>ZmHOX2a(1) -->NtERF2 --------->MYB46(3)  --------->REM1(1)--------->ATERF1(1)  <---------GLK1(2)  <---------At4g35610   gcgtcgaggctcaaccgatcagcctcataagctacagcatcgaaagcgacgccgtcgccgttctccgatccgattctagagagattcctccgctgtgacc  28809500                           --------->LBD16                          <---------HSFB2a(2)                          --------->HSFB2a(2)                         <---------LBD16                         <---------ANAC46                      --------->ARR14(2)                         <---------ANAC58                      <---------ARR14(2)                         <---------ANAC58                   <                      <----------DOF2                           --------->ATHB12                    -                     <-------GAMYB                            <---------WOX13(1)                    -                --------->DAG2                    ------>ZmHOX2a(2)        <-----------RAV1(2)      < ------->ARR14(2)   <---------MYB46(3)            =================HOX2a_HOX2a                      - --------ARR14(2)   <---------DEAR3(2)           ==================HOX2a_HOX2a        --------->TOE2(3) ------------AGL1  <---------RAP2.6(2)           <------ZmHOX2a(2)      --------->ARR14(2) --------->ATHB12 ----------->AGL1  <---------DEAR3(1)           --------->ARR14(2)      <---------ARR14(2)<---------YAB1 -->HVH21      ---------->DOF2                  <---------ARR14(2)<---------WOX13(1)--------->GLK1(2) --HVH21      ---------->DOF2        ---------->DOF2        <------ZmHOX2a(1)<---------At4g35610 <---   cgatttggacggagagaaaaggcggtttctgggaattgacaaaggaatcggatcgaaaacgaggattgattgcaaatccaggtgataatcttatcattgg  28809600             --------->ANAC58     --------->ANAC58     --------->ANAC58     --------->ANAC46                                    <---------LBD16                       <----- --------->CCA1(2)                               <----------DOF2                           --------->RAP2.6(3) <------ZmHOX2a(2)                             --------->ZAT2                             <---------DOF5.7(2) ---------ARR11(3)                             <---------At4g35610                        <---------- -------->ARR11(3)         <---------ANAC46    --------->At4g35610                 --------->ANAC58 -------->AGP1<---------ATHB12                 <---------ZAT2                    --------->CCA1(2)  - ---------ARR14(2)       --------->ALFIN1<---------ARR11(3)            ----------->GT1    --------->MYB52(1) -------->ARR14(2)       <---------ANAC46<-----------ARR10<---------ANAC46    *TSS --------->ANAC58 < -----P      --------->ANAC58            --------->ARR11(3)--------->LBD16  ---------->DOF2<---------At5g28300   tagatccacgaacacaatcaattcagggtgtgtgttttcgaaaaatctcagctttgttctccgtgttgttctcttgttaaaagataagaaattaacggct  28809700                 <---------LBD16                                                  --------->AHL20(2)  --------->ATHB12             ------------>CBF                                   <---------AHL20(2) <------ZmHOX2a(2) --------->At4g35610          ------------>CBF              <---------AHL20(2) <--- ----ANAC46  <---------At4g35610            <---------ANAC58                  --------->AHL20(2) ---- -GT1        --------->At4g35610            <---------ANAC58                 --------->AHL20(2) <---- -------->ARR11(3) <---------At4g35610     <---------TOE1(2)              --------->ATHB12  <-------- ---------ARR11(3) --------->LBD16    ------>ZmHOX2a(1)              <---------YAB1<---------AHL20(2)   tagatcatttgtttcagttcccgctgaaaacacttcaatccttcttgggtttcaatttcaaaacctctcttataaatgatttaattaaatgggcctttta  28809800                                                                                    --------->ANAC46                                                                                    --------->ANAC58                                                                                   ------->MYC2                                                                      <-----------TGA1                                                                      <-----------HVH21                                                                     --------->ANAC46                                                                     --------->bZIP60(2)                                                                     --------->O2  <-------MYC2                                                                     <---------O2  <-------MYC3                                                                     --------->TGA1a--------->ANAC58                                                                   <---------ALFIN1------->MYC3                                                                --------->ANAC46  --------->ANAC58                                                          <---------MYB55(2)      --------->ANAC58                                                          --------->MYB46(3)      --------->ANAC46                                                         --------->ANAC58       <---------ALFIN1        --------->ANAC58                                 ------>MYB46(1)       --------->ZAT14        --------->ANAC46                                 ------>MYB83--------->ANAC58      ---------->DOF2               --------->LBD16    ------->GAMYB --------->ANAC58      <---------ATHB12            <---------LBD16      ========================MYC_MYB ------At4g35610             --------->ANAC58         --------->MYB46(3)       <---------REM1(2) ----->At4g35610             --------->ANAC58         <---------MYB55(2)   <---------ICU4 -------GT1           <-----------GT1     <----------DOF2--------->ANAC58 --------->ICU4   --------->WOX13(1) --DOF2 --------->ANAC58--------->ZAT6    =====================================bZIP_DOF  <---------ATHB12   tctgcccaataagcaatcttcttctaacaatacgcttccgcgagcttttctctctaaccacccatccctccacgtcataactacacgcgctatcaatctt  28809900                                       ------->PIF5                                       <-------PIF5                                      <---------ANAC46                                      <---------ANAC58                                      <---------ANAC58                           --------->ANAC46                        <---------ZAT18<-------MYC3                    <---------------AtSPL8                --------->DAG2  ---------->DOF2               ---------->DOF2---------->DOF2         ----------->GT1<---------ZAT14------->MYC3                  <---------ARR14(2)        ----------->GT1 --------->ZAT18------->MYC2               <---------ANAC58    ----------->HVH21   --------->ZAT14<-------MYC2---------->DOF2<---------ANAC58              <----   ttgcattggacgggtaaaaaagcgagtacacaaaaagagcgcgtggtttgacttaaagagttgtactcgcgtttccaagagcgggtttagcaaattcaaa  28810000                                                                      <---------ANAC46                                                                     --------->ALFIN1                                                                     <---------AtMYB61                                                                   <---------ANAC58                                                                   <-----------RAV1(1)                                                                   <---------ANAC58                                                                   <---------ANAC46                                                    --------->HSFB2a(2) <---------ANAC46                                           --------->ZAT14  <---------TOE2(3)     <----------DOF2 --------CBF                        <---------GLK1(2)      <-----------GT1 <---------ZAT14   ttgaaacatttatgcccaaaattatctgagacgatttcgattctctaaactcttccaaaattaacatttgtgtggtgtttagtgatttatggtgagagaa  28810100                                                              <---------ARR11(3)                                                            --------->ANAC58                                                            --------->ANAC58                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                     --------->ARR11(3)                                                     <---------ARR11(3)                                                     <---------ARR14(2)                                                     --------->ARR14(2)                                                    <------ZmHOX2a(1)                                                   --------->HSFB2a(1)                                                   <---------HSFB2a(1)                 ------>ZmHOX2a(2)                 --------->HSFC1(2)               --------->ARR11(3)               =============HOX2a_HOX2a               <---------ARR11(3)               ==============HOX2a_HOX2a      <------------CBF       ------->TEIL       <------ZmHOX2a(1)  --------->AtLEC2         <--------    <---------YAB1<----------DOF2 <---------AtLEC2 <---------HSFC1(2)   ---------->DOF2--------->ANAC46   gaatttctcattgtttcgatctttgaaaatgaattttcatggaatgaagaggaaggatctacaagctctatgcaaaaagaatggaatcccagcaaatttg  28810200  Previous    Next  AGI:  At1g76730.1    Description:  5-formyltetrahydrofolate cyclo-ligase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO43609.1); contains InterPro domain 5-formyltetrahydrofolate cyclo-ligase; (InterPro:IPR002698) Range:  from: 28807819    to: 28809678    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g76740.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G76840.1); similar to cell wall-anchored protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (GB:YP_300225.1) Range:  from: 28810129    to: 28815451    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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