Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          --------->ZAT2                                                                                     ------->GAMYB                                                                           --------->ICU4                                                                         <---------ICU4 <---------ZAT2                                                           ----------->GT1 <---------YAB1                           --------->ANAC58              --------->At4g35610      --------->MYB52(1)-                           --------->ANAC58              <---------At4g35610<---------ICU4         <-   <-----------HVH21     ---------->DOF2            --------->CCA1(2)    --------->YAB1 --------->At4g35610 ----ZmHOX2a(2)         --------->AtMYB61      <------ZmHOX2a(1)        --------->ICU4  <---------At4g35610   atcagagtcagagagagagaggcataccaaagccaaaaccgaaaccagaggaagacatgagctgtttattagccatgatgattccaacggagctgattac  28779400                                                                                                 ----                            --------->ABI4(1)                                                   <----                            ------>NtERF2                                                       -----                   --------->At4g35610                                                         ------                   <---------At4g35610                                                         <-----                 <---------bZIP60(1)                                                           <-----                 --------->bZIP60(1)                   --------------->AGL15                   ------               ----------->RAV1(1)                     <---------------AGL15                   <-----               <---------DDF1                         <-----------------AGL2                   ------              --------->DEAR3(1)                      <-----------------AGL1                  <------              --------->At1g77200                     <-----------------AG                  ---------              --------->DEAR4(1)                      <-----------GT1                     <----------             --------->DEAR3(2)                    <---------ARR14(2)               ----------->RAV1(1)         --------->AtLEC2  --------->DEAR3(1)      --------->ARR14(2)              --------->DEAR3(1)         --------->ANAC58 --------->DEAR3(2)     --------->LBD16                   --------->DREB2C(2)         --------->ANAC58<---------ATERF1(1)   <---------LBD16                     --------->At1g77200 -------->YAB1--------->DREB2C(2)--------->GLK1(1)<---------MYB52(1)               --------->DEAR4(1) ------TEIL ------->TEIL<---------ALFIN1    <----------DOF2                        <---------ETT(1) <   attcatagcccatgcaccgacatcagacaccgccgatttcttctcgctctccggtttctccatttggatttgagaaaattgaacaccgacactatcagat  28779500     <---------ANAC46     <---------ANAC58     <---------ANAC58                                                                        -------- ------->TEIL                         <---------GLK1(2)                                     --------- -->ZmHOX2a(2)                  --------->ARR11(3)                                   ------>ZmHOX2a(2) --ZmHOX2a(2)            ------>ZmHOX2a(2)                                          <------ZmHOX2a(2) ---->CCA1(2)           --------->CCA1(2)                                           --------->CCA1(2) --->AGP1               <------ZmHOX2a(2)              >>>>>>>>>WRKY18             --------->AGP1 ----AGP1              <---------ARR11(3)         <---------ARR11(3)               --------->ARR11(3) ----ARR11(3)          --------->AGP1 <---------ARR14(2)                           --------->ARR14(2) --->ARR14(2)          <---------ARR14(2)         --------->ARR14(2)               <---------ARR14(2) ----ARR14(2)          <---------AGP1 --------->ARR14(2)                           <---------ARR11(3) --->ARR11(3)          --------->ARR11(3)         <---------GLK1(2)                <---------AGP1 ---CCA1(2)            --------->ARR14(2)  <---------ANAC58                       <---------GLK1(1) >YAB1     --------->ANAC58    <---------GLK1(1)  --------->ARR11(3)             ----------->ARR10 -HVH21    --------->ANAC58    --------->GLK1(1)  <---------ARR14(2)         --------->CCA1(2) ---------GLK1(2)     <---------GLK1(1)    <---------ANAC58             ---------->DOF2----------->GT1   ctgaatctcgtgcaagcgaaaacgagatctgagaaatctcgattcgcttgcagattttgacagaatcaaacactgaaagagatgagatctggagaaaagt  28779600                                                                  <---------CCA1(2)                                                                 <---------ARR11(1)                                                                 --------->ARR14(2)                                                                 <---------ARR14(2)                                                                 ------->TEIL                                                                <---------CCA1(2)                                                              --------->ANAC55(1)                                                              --------->ANAC46                                                              --------->ANAC55(2)                                                              <---------O2                                       ----------->GT1        --------->O2            <---------LBD16            <----------ID1         --------->ANAC58           <---------ANAC58         --------->DAG2            <---------TGA1a           --------->MYB52(2)      ---------->DOF2            --------->TGA1a           <---------ANAC58        =====================================bZIP_DOF           <---------ANAC46   ------------------------>ANAC81 --------->ANAC58    --------->ANAC46         --------->ANAC58                 <---------ANAC55(2)    --------->ANAC58         --------->ANAC58         --------->ANAC58    --------->ANAC58 --------->At4g35610              --------->ANAC58                       <------- ->DAG2  <---------MYB52(1)=============================================bZIP_DOF         <---------YAB1 ->DOF2 <---------SPL7     ---------->DOF2            <---------ALFIN1           <---------At4g35610-   cgattcacgccgttcgtggaatcagcgaagaaagccaaaaagcgaaaaacacagacacacactcacgtatctctctctgtctctgctacttatgcttcac  28779700                                       --------->HSFC1(2)                                       <---------HSFC1(2)                                  --------->ANAC58                       --------->ARR11(3)                       <---------AHL20(1)                       <---------ARR11(3)                <---------ZAT2    --------->ANAC58                <---------At4g35610   --------->ANAC58                      <---------YAB1                --------->ZAT2    --------->ANAC46                        ----------->GT1                --------->At4g35610   --------->ANAC58            <---------ANAC46               ------->TEIL   --------->YAB1                  <----------DOF2            --------->ANAC46 <---------YAB1                  <---------ANAC58       --------->ANAC46--------->AHL20(1)                    <---------ANAC58    --------->ZAT14    <---------AHL20(2)         --------->ANAC46<---------ANAC58         <---------AHL20(2) --ZAT14 ----------->HVH21<---------AHL20(2)      <---------ALFIN1<---------ANAC58    <----------DOF2 -------->ARR14(2)     --------->AHL20(2)        --------->MYB46(3)       <---------MYB46(3)   *TSS   tggttcttcactcgacgtagctgaatatattatcacaagcaagcttcttctcccaccattgatgctttccttggagttgttataaattcttttttaattc  28779800                                                                          --------->DOF5.7(2)                                                                        <---------ANAC58                                                                        <---------ANAC58                                                                        <---------ANAC46                                                                   --------->O2                                                                   --------->TGA1a                                                                   <---------ANAC55(2)                                                                   ==================================                        <---------AHL20(1)                         --------->ANAC55(2)                        --------->AHL20(1)                         <---------ANAC58                        <-----------------AGL3                     <---------TGA1a                    <---------AHL20(2)                             ==================================                   --------->AHL20(2)                              <---------ANAC58                  <---------YAB1                 <---------AHL20(2)<---------ANAC46                 --------->AHL20(2)  <---------ICU4           ----------->HVH21<---------DAG2       -               --------->AHL20(1)    --------->YAB1          <---------WOX13(1)--------->TOE2(3)    =              --------->YAB1         <--------HAHB4         <------------CBF   --------->TOE1(3)   <-              --------->AHL20(2)    <---------ATHB12       --------->ATHB12--------->WRKY12        <-            --------->AHL20(2)      --------->ICU4<---------AHL20(2) --------->ALFIN1           <----           --------->YAB1  <---------AHL20(2)    --------->AHL20(2)<---------O2<---------MYB59  -----    --------->GLK1(1)   =============================================================================   --------->ARR11(3)  <---------AHL20(2)   --------->ANAC55(2)  <---------ANAC46     <-----------GT1   tctgagatttcgaaaataatattatatatattaatggaatcattttaagtattaatttcattcattgacgcgtgtcgtttaccttatttgaccttcttct  28779900          <---------ZAT18          --------->ZAT18   <----------DOF2 ======bZIP_DOF ======bZIP_DOF    <---------MYB46(3) -------------->AGL15 ======================================================MADS_MADS     ------>NtERF2   <----------DOF2 ----------------AGL1                  <---------ANAC46    <----------DOF2      <---------ANAC46 ----------------AGL2                  --------------->AGL15         <---------At4g35610 ------DOF2<---------ALFIN1            <---------------AGL15   <---------ANAC58 <---------ANAC58 ---------------->WRI1                <-----------------AGL2   <---------ANAC58 <---------ANAC58    < ===============MADS_MADS<-----------GT1                 ---------->ID1    <---------DOF5.7(2)      -   ttcttcttttggtccacttgtttgttatttcaatatgagttctgtatagggatagttttgtcttttcgtgccgctggtaacgtcgtgcttttagttttca  28780000              <---------ANAC58              <---------ANAC58           --------->TOE1(2)                                                                       --          <---------ANAC58                                                                     ------          <---------ANAC58                                                                     <-----        <-----------GT1           --------->DOF5.7(2)                                     --------->At5g28300 <---------AHL20(2)              --------->TOE2(3)            --------->ANAC58           ----------->GT1 <---------AHL20(1)            <---------TOE2(3)       --------->ANAC46                  ------->GAMYB --------->AHL20(2)     --------->AHL20(1)             --------->ANAC58                <---------TOE1(3) --------->AHL20(1)     --------->AHL20(2)             --------->ANAC58               <---------DOF5.7(2) ---------AHL20(2)      <---------AHL20(1)     <----------DOF2--------->ANAC58        --------->MYB52(1) -------->AHL20(2)      <---------AHL20(2)   ----------->GT1  --------->ANAC46      --------->DOF5.7(2)   aattaaattttaacttgcgagattattttattaaacgtttacttaagtgcttaaattaagccacaaggaactgataacagcgaattgttaacggtaattt  28780100           ------->TEIL        --------->ANAC58        <---------ANAC58        <---------ANAC55(2)        --------->ANAC55(2)        <---------ANAC58        --------->ANAC58                            <------ZmHOX2a(1)       --------------->AtSPL8                      ----------->GT1       --------------->AtSPL3                     ----------->GT1     <---------SPL7                     --------->AHL20(2)   <---------------AtSPL8               <---------AHL20(2)   <---------------AtSPL3           <---------AHL20(2)  ------->GAMYB                    --------->AHL20(1)              ----------->GT1 ------->MYB52(1)                  <---------AHL20(1)            <---------ANAC46          <---------AHL20(2) --->AHL20(2)                      <---------ARR11(3)    --------->RVE1(1)                 --------->AHL20(2) ----AHL20(2)        <---------AHL20(2)--------->AHL20(2)--------->CCA1(1)     <-----------GT1   ataacggagtacgtacttactacttaatttcaaactatatatttaatttagacaggaaaatatcgcgatgtgtaactaatagtaccatttgattaaaatg  28780200                                         --------->YAB1                                        <---------YAB1                                       --------->AHL20(2)                                      --------->YAB1                 <-----------GT1                                  --------->AHL20(2)                 --------->YAB1                                  <---------AHL20(2)              <---------ICU4                  <--                           <---------ANAC58 <---------ICU4       --------->ICU4                   <--                           <---------ANAC58 --------->YAB1  ----------->GT1                   <------                       --------->YAB1<---------YAB1---------->DOF2--------->YAB1          <----------     <-----------RAV1(1) <---------YAB1<---------AHL20(2)---------->DOF2     <<<<<<<<<<<<<<<<<LFY----   tagaaatgtgttgttcattttcgaataatgcttgattttattataatcatatcgaaagtgaaaggaaataatcacaatttgccattggtcatagtcacac  28780300  Previous    Next  AGI:  At1g76670.1    Description:  transporter-related. similar to transporter-related [Arabidopsis thaliana] (TAIR:AT1G21070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66327.1); contains InterPro domain Protein of unknown function DUF250 (InterPro:IPR004853) Range:  from: 28777494    to: 28779795    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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