Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->GLK1(2)              <----------DOF2         ---------->DOF2       --------->ANAC58       --------->ANAC58                                ---------->DOF2         --------->ANAC58------     --------->MYB52(1)                            ----------->GT1             --------->ANAC58<-----   gccaaaaaaacgaaagctttaaaatctgaagaagttagaactgagacagagagaagtaaaagctcaagaagtcgaaatcaaacgaaaatagagagaatta  28775900           ------>ZmHOX2a(2)         --------->ARR14(2)         <---------ARR14(2)   <---------ANAC58     ----------->RAV1(2)     <---------TOE2(3)                                               <------- --->AHL20(2)    <----------CDC5                    ----------->GT1              <---------YAB1 ----AHL20(2)------>ZmHOX2a(1)<---------ANAC58<---------MYB52(1)      <-----------GT1   ----------->GT1   aacagaaacctgatcctgctctgagcccatttaggtgtctctctctctgttagtcagaaaaatcacagagttttactcttattctgagtagggtttcttc  28776000                --------->YAB1                <---------ICU4               --------->ICU4                                                     <------ZmHOX2a(1)            --------->TGA2(2)                                                   --------->ALFIN1          --------->ANAC55(1)                                             <---------HSFB2a(2)          --------->ANAC58                                              <------ZmHOX2a(2)          --------->ANAC46                                              ==============HOX2a_HOX2a          --------->ANAC55(2)                               <---------ZAT14    <------ZmHOX2a(1)          --------->ANAC58  <-----------GT1                 --------->ZAT14--------->LBD16       ----  <-----------HVH21     <<<<<<<<<MYB2              <<<<<<<<<TBF1        =================HOX2a_HOX2a ----------AGL1<---------ATHB12                <---------ARR11(3)      <---------ARR14(2)  ----------   aacaggtcatagacgtaatcatcttggttttctccattttttctcacaatttcttcttccagtttactgatacgatccagaggaggagcaaacaaaagtt  28776100                              --------->ARR11(3)                         --------->ALFIN1                 --------->ARR11(3)     ---------->DOF2            --------->ALFIN1                 <---------ARR11(3) <---------LBD16             --------->ATHB12     --------->DAG2           <---------ARR11(3)               <---------YAB1                  ------   ---------->DOF2            <---------GLK1(2)            --------->AHL20(2)             --------->AHL20(2) ------>DOF2 ---------->DOF2--------->ICU4    <----------ID1<---------AHL20(2)       ----------->GT1 >DOF2 ----------->GT1    ---------->DOF2   ---------->DOF2<---------AHL20(2)      ---------->DOF2   aaagcaaaagggtgaaaaagattttaagtaaagatttttggggaaagaaagacaaaactaattttatgagtgggagtgggagagataaagaaaaaaatgg  28776200                                <---------ZAT14                                --------->ZAT18                            <---------ARR14(2)                  ------>ZmHOX2a(1)                            --------->GLK1(2)                 <---------ICU4--------->DAG2                            --------->ARR14(2)                ------>ZmHOX2a(2)                           <---------GLK1(1)                 <---------YAB1---------->DOF2       <---                         <------ZmHOX2a(1)                  <---------ARR11(3)                -------                       <---------TOE2(3)                    --------->ARR11(3)           --------->AHL20(2)               ----------->GT1  --------->ZAT14        --------->ICU4 --------->ANAC58   <---------AHL20(2) ----->GT1 ---------->DOF2 --------->GLK1(1)         ---------->DOF2  --------->ANAC58  --------->YAB1   aaatttgagaagagaaagagtaaataaggaaatctgcactgatgcaatcggcatgaaaagatgatccttaccaaggaaaaagcatttctattttaatcag  28776300                                                                    --------->ANAC58                                                                    --------->ANAC46                                                                <---------ALFIN1              --------->ANAC58                                ----------->RAV1(1)                 <--    <---------ANAC58                                      --------->ANAC58                      <----    <---------ANAC58                                      --------->ANAC46                     ------   *TSS-------->P                                         --------->ANAC58   ---------->DOF2  ------- ------GLK1(2)--------->ANAC58  <----------ID1     --------->DAG2   --------->ANAC58      <----------ID1 -->YAB1    ---------->DOF2   ---------->DOF2     ---------->DOF2------->GAMYB        ---------->DOF2   aatgtgacttaccacaaagcaagagcaaaaaaaaaagacaaaacaaaacacaaaaagctcaagccaacacacacaaaaaaaaagacataaaagagaaaaa  28776400               <---------TOE2(3)              <---------ICU4                                                                     ----           --------->YAB1                                                              --------->AHL20(2)          <---------AHL20(2)                                            <---------YAB1 <---------AHL20(2)  ---------->DOF2                                                     <---------ICU4   --------->AHL20(1) --------ID1  --------->YAB1                                          --------->YAB1  --------->AHL20(2) -----------AtSPL8                                                   --------->ICU4   <---------AHL20(2) --->DAG2 --------->AHL20(2)                                ---------->DOF2    --------->HSFB2a(2) --->DOF2--------->AHL20(2)           <-----------GT1    --------->At5g28300   <---------HSFB2a(2)   ggaacaaagaaattaataatgttttaaatctcttcggttttcacactctctgaaatagcagtaaaagaaaaattatgagttttggaaattaaattggttt  28776500                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                    <---------ICU4                             ------                                                   --------->ICU4                              <-----                                        ----------->GT1                                       <------                                    <---------AHL20(2)                                        <------                                   --------->AHL20(2)                                         -------                                   <---------AHL20(2)                                         -------                              <-------GAMYB       <---------ANAC55(2)       --------->DAG2    -------                             <------MYB46(1)      --------->ANAC55(2)      ==========================       ----------->GT1       <---------MYB46(3) <-----------GT1            ---------->DOF2    -------  ---------->DOF2            ----------->GT1    --------->AHL20(2)       <---------AHL20(2)  -------- ------->GT1 <---------YAB1  <------MYB83----------->GT1                --------->AHL20(2)  <--------   ggaaaaaagaggtttatcaatgtgtttaagttggttattaaatgggtaaattacttattagacatctaaacctattaaaaagttgattcggtgagcacgt  28776600     --------->DOF5.7(2) <------ZmHOX2a(1) ------>HVH21 --PIF5 ->PIF4 ->PIF5 --MYC2 ->MYC2 --PIF4 --MYC3 ->MYC3 ->MYC4 --MYC4                                                          <---------DAG2 ---ANAC55(2)                                                    <----------DOF2 ---TGA1a  --------->YAB1                                       <---------ANAC58 -->ANAC58--------------->AGL15                   <---------AHL20(1) -->TGA1a<-----------------AGL2                   --------->AHL20(2)        <------MYB83--------->ANAC46 -->ANAC58<---------------AGL15      ----------->GT1            <---------ANAC58        --------->ANAC58 ===bZIP_DOF                    --------->ANAC55(2)<---------AHL20(2)       <------MYB46(1) -->ANAC55(2)                   <---------ANAC55(2)--------->AHL20(2)      <---------AtMYB61 ---->OsbHLH66        <---------TOE1(3)           <---------AHL20(2)       --------->MYB59 ----OsbHLH66         <---------TOE2(3)  ---------->DOF2      <-----------GT1           --------->ANAC58   gaaggacgtttactaataagggttaagggagaacatgtaatgtaaaagtcaatttttttagtttttgcttttttggtttggtctataaacacgtccaaaa  28776700                                          <---------ICU4                                          <---------AHL20(2)                              <---------TOE1(3)                   --------->ANAC58      <---------YAB1                                       <------                   --------->ANAC58    --------->YAB1                               <---------AHL20(2)                --------->WRKY18(1) --------->YAB1                             <---------YAB1<-------      <-----------GT1         <---------TOE2(3)                         <---------GLK1(2)    <-------   tcagtgtataactgcttagtcaagcgaccattgaggtttaataataaatgctatacacttatcaagaacaacaagattgttgtgatttttttttggcttt  28776800  Previous    Next  AGI:  At1g76660.1    Description:  Identical to Uncharacterized protein At1g76660 [Arabidopsis Thaliana] (GB:Q9SRE5); similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT5G52430.1); similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT4G25620.1); similar to Os01g0103800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041759.1); similar to hypothetical protein OsI_000028 [Oryza sativa (indica cultivar-group)] (GB:EAY72181.1) Range:  from: 28773773    to: 28776303    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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