Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <----------DOF2       <---------GLK1(2)                              <---------DAG2                   <---------At4g35610     <---------TOE1(2)                             <-----------GT1          --------->ANAC46    ------>ZmHOX2a(1)                           <---------ICU4           <---------REM1(2) ------GLK1(2)  --------->YAB1                  --------->YAB1   <-----------GT1       --------->At4g35610   attctcctagcttctttagcatcatcttcaagcttcttggtgtaatacaatcttcaccttctgcaatatacagtctaaacgctcccttgagctccatctt  28772000                                                                                         <---------ARR14(2)                                        ------>ZmHOX2a(1)                               <---------At4g35610                                       --------->TOE2(3)                                --------->ZAT2                                   --------->KAN4(2)                                    <---------ZAT2                       <---------WOX13(1)                                            <---------At4g35610                    <---------YAB1--------->HSFB2a(1)                            --------->MYB52(1)                  <----------DOF2 --------->HSFC1(2)              <---------ANAC58   --------->At4g35610             <---------At4g35610  <---------HSFB2a(1)             <---------ANAC58  ------->GAMYB         <-----------TGA1--------->MYB52(1)        --------->MYB46(3)<-----------HVH21  --------->At4g35610         <-----------HVH21        <---------HSFC1(2)           <---------SPL7--------->GLK1(2)   cttctcttcttcgtcatctactttgattaactgagaaaattcctcaaaatccaacatcccatctccgtccgtatcagacaatctaacagcagctacggct  28772100                                                             <-----------GT1                                                          --------->GLK1(2)                                    <----------DOF2      <---------GLK1(2)                  >>>>>>>>>>>>>>>>>LFY                 ----------->ARR10   --------->At4g35610         ------->TEIL --------->ARR11(3)      --------------------->WRI1   <---------At4g35610      <---------YAB1  <---------ARR11(3)<---------At5g28300 --------->AtLEC2   tcttcatcagacaattgttctcccaatgtcatgaaactcttttgaagctcttctggtgagattctaccgtctctgtttgcatccatgtaagaaaaaacag  28772200                                                                  <-----------------AGL1                                                             ------->TEIL                        <---                                                             --------->ARR14(2)                  <---                                                        <---------At4g35610                      <---                        --------->ATHB12                --------->At4g35610               ---------->DOF2                        <---------ICU4                 ------>NtERF2                   ------>NtERF2                       <---------YAB1                  --------->LBD16                 --------->LBD16                 ---------->ID1               <---------CCA1(2)--------->KAN4(2)      <---------ETT(1)             <---------ANAC58      <---------MYB52(1)<---------LBD16   <----------DOF2<---------LBD16             <---------ANAC58    <---------ZAT6------->TEIL  <---------ARR14(2)      <---------LBD16    --------->ZAT6  ------>ZmHOX2a(1) <-----------RAV1(1)    <-----------ARR10     <---------ARR14(2)   cctctaactctctgttcttgtcctcaccattgctactgttatgttgttgtatctctccggctgaatcttccctctttggtgatagtttccggcaaagttt  28772300            <---------TOE1(3)            <---------TOE2(3)         <---------WOX13(1)       --------->ATHB12                              <---------ANAC55(1)      <---------YAB1                                 <---------ANAC46 ---------->DOF2                <---------YAB1  ----------->GT1                  <----------DOF2 ------ANAC58            <---------YAB1     <---------AHL20(2)                <-----------GT1 ------ANAC58         <---------YAB1       <---------AHL20(2)          <---------ANAC58      -------- ------ANAC46     <---------ANAC46         --------->AHL20(2)          <---------ANAC58     ---------   cttgaaagatgattgaggttgagtattattcttcatgagagaaaaataaatggttaagtgtattttttgtttgtcttgttttacttttgaaatgaaaagt  28772400                                                                                            ---------                                                                                            <--------                                            <---------AtMYB61                               <--------                                          --------->ALFIN1                                 <---------AHL20(2)                                        <---------ANAC46                                   --------->AHL20(2)                                        <---------ANAC58                             ----------->GT1<                                <-----------TBP                                  ------->TEIL       - ->DAG2      ---------->DOF2  <-----------TBP  --------->WRKY18(1)              <---------CCA1(2) <-- ->DOF2    *TSS     <----------DOF2     <---------ANAC58                  <---------AHL20(2)---------   gaatgagaaataggggaaagggcttttatgttttatatataggcgtgtggtcaagttgtggtaatggaatgggtattttcttgaatcttgaaaataaatt  28772500        <---------ANAC58        <---------ANAC58        --------->ALFIN1      --------->ALFIN1 <------ZmHOX2a(2) >AHL20(2)                        <--------P      <---------CCA1(1) -AHL20(2)                     --------->ALFIN1  <---------ARR11(3)                         --------- -AHL20(1)                   --------->O2        --------->ARR11(3)            <---------ANAC58 ---------ARR11(3)           <---------TGA1a    <<<<<<<<<RAP2.2    --------->AHL20(2)       --------- -------->ARR11(3)           <---------O2 <---------ZAT6    <----------DOF2    <---------ANAC58<----- -------YAB1                 ==============MYC_MYB<---------RVE1(1)<---------AHL20(2)       --------- >AHL20(1)                   ==========================================bZIP_DOF<---------ANAC46<-----   aagatcaagtgtgtgtgtgtgtgtgtaatagacgtggtagattagtgtttagatattttggacttttattttaatgagttttcttgtataaaacacgctt  28772600                                                                                        <---------MYB46(3)                                                                                       <---------DEAR3(1)                                                                                      <---------ZAT18                                                                                      --------->ZAT18                                                                                      <---------PCF2                                                                                    <---------MYB46(3)                                          --------->ANAC46                          <---------DEAR3(1)                                          --------->ORA47(1)                       --------->ALFIN1                                         <---------MYB55(2)                    <---------At5g28300                                         --------->DEAR3(1)                   <-----------GT1                                         --------->DREB2C(2)                  --------->MYB52(1)<----                                       --------->MYB52(1)                <---------RVE1(1)      -----     <----------DOF2                  --------->AtMYB61                 --------->ARR11(3)      <---- >ANAC58                             <---------ABI4(2)                  <---------ARR11(3)      ----- >ANAC58                <-----------------AGL3                          <---------GLK1(2)<-------GAMYB -----DOF2--------->ATHB12           --------->MYB46(3)             --------->ANAC46--------->ABI4(2) >ANAC46 <---------YAB1<------ZmHOX2a(2) --------->MYB46(3)         --------->ANAC58<---------RAP2.3(3) ----DAG2<---------AHL20(2) <---------ATHB51 <---------ALFIN1       --------->ANAC58--------->MYB55(2)   tttcttcctttttaattggatgacgatcaaattatggagaccaccggccacttgtatttgaaacttgcacacgagatttttaacggtgggcgcttggaag  28772700                                                         --------->YAB1                                                      --------->YAB1                                -                                                     <---------AHL20(2)                             <                                                     <---------YAB1                                 -      --------------------->WRI1                    --------->AHL20(1)                          ----- -----HSFB2a(1)                            <----------DOF2  ---------->DOF2                    <----- ---->At4g35610                    <---------ANAC58 <---------AHL20(1)                        <------ -----HSFC1(2)                     <---------ANAC58 --------->AHL20(2)                        ------- ---->HSFC1(2)                  <----------DOF2--------------->AGL15                <---------------AtSPL3   cttcacttccttcgtcttatctatctctctctctctttcttgtttctttctcaatataataacaaagacaaacatttgtttgactatgtgtacgaatatc  28772800          --------->AHL20(2)    <------MYB83    <------MYB46(1)  <--------P <---------ANAC46 -------->MYB55(2)                    --------->ANAC58 ---------MYB46(3)                    --------->ANAC58 -------->ATHB12                 --------->ANAC58               <---------YAB1 ---->ATHB12                     --------->ANAC58            <---------MYB52(1)             --------- ----YAB1----------->GT1         --------->ANAC46       --------->MYB52(1)         --------->YAB1 ---ARR11(3)            ------>ZmHOX2a(1)           --------->ANAC58              <---------YAB1 -->ARR11(3)          ----------->RAV1(2)           --------->ANAC58    <-----------GT1  <---------ZAT14   attggttggaaatgaaatattatctcctgcaaaccaaggcacacatagaaatagaagccaacggttatgaaattttaccaagtgatgatacttcacttga  28772900  Previous    Next  AGI:  At1g76650.1    Description:  CML38; calcium ion binding. similar to calmodulin-related protein, putative [Arabidopsis thaliana] (TAIR:AT1G76640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66321.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 28771644    to: 28772411    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version