Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 ---------->DOF2                         <-----------GT1                        <---------YAB1                      -------->ATHB1                      --------->ATHB51                      --------->YAB1                      -------->HAHB4                      <---------ICU4                  <---------LBD16                      <--------HAHB4                  <---------ANAC46                     <---------YAB1                   <---------ANAC58                     <---------ATHB51                 <---------ANAC58                     --------->ICU4             <---------YAB1               <---------GLK1(1)                  --------->AHL20(2)          <---------MYB46(3)     <---------TOE2(3)       -------- --GT1            <---------AHL20(2)          ----------->GT1      ---------->DOF2          ---------   ttcttgacaaaaataggtgtttaattattactacaaagttcaggtcgattgttatttcgggctacataaaaaaggtttgatttctcgtatgggagtgatt  28761000                                                                                         <---------ICU4                                                                                         --------->ATHB12                                                                                        <---------AHL20(2)       <---------AHL20(2)                                                       ---------->DOF2       --------->ATHB12                                 <---------ALFIN1    --------->At4g35610  <---------ARR11(3)         <-----------HVH21       --------->PCF2   <---------YAB1    --------->AHL20(2) ->ATHB12        <---------AHL20(2)                 ---------->ID1  ----------->GT1     --------->ICU4 >ICU4<---------YAB1 <-----------GT1       ----------->GT1      <---------AHL20(2)   <xxxxxxxxxxxxxxx   acaacatatttattggtattttatgaccccatgtcaactcttatgtagtaatttgtccccacttattgaattgttattagctcaaaggcattaattgcac  28761100                                                                 <---------ANAC58                                                         <---------YAB1                   --------->TOE2(3)                                                    <--------HAHB4                      <---------YAB1                                                    --------->YAB1                  --------->ARR11(3)                  --------->YAB1                    <---------ICU4                  <---------ARR11(3)       <----------DOF2                             --------->ICU4<---------ANAC58   --------->AHL20(1)       <---------DAG2                              <---------ATHB12 ----------->GT1 <---------AHL20(1)    <-----------GT1                          --------->ZAT6      <---------AtLEC2------>MYB83 xxxxxxxxsmallRNA(se3)          <-----------GT1  --------->YAB1  <---------ANAC46------>MYB46(1)   --   ggtttctaacttttcttctatagtagtatgtttttcacatttgaaaaacactaatcattttcattttgcatggaaataagaccaaatattttcattaatc  28761200                                                     <---------YAB1                                                     <---------AHL20(2)                                                  <---------AHL20(1)                                                  --------->ARR11(3)                                                  <---------ARR11(3)                                                  --------->AHL20(1)                                        --------->AHL20(2)                                --------->AHL20(2)--------->AHL20(2)                               <---------YAB1     <---------AHL20(2)                             --------->YAB1  --------->AHL20(2)                             <---------ICU4  --------->AHL20(1)                            <---------ATHB12 <---------AHL20(1)                            --------->ICU4  --------->YAB1      ----------->GT1   ---------->DOF2                    --------->ANAC58    <---------AHL20(2)    --------->ICU4   --------->ANAC58              ----------->RAV1(1)   <---------AHL20(2)        <---------YAB1   --------->ANAC58 ------->ANAC46     --------->ANAC58--------->AHL20(2)     <---------YAB1      --------->AtLEC2     -   cactaaattgcatttgcaacacaagcccaaatcattatatatataaatataatatattattgtgatgagtaaaatatagacatgcaaagtgactatgaac  28761300                                                                            <-----------GT1                                                                            --------->ZAT6                 --------->ANAC58                                         --------->YAB1     <-------            --------->ANAC46                                            --------->AHL20(1)   <-------        <-----------GT1                                                 --------->AHL20(2)  <--------      --------->YAB1            --------->ICU4                         --------->YAB1       ---------      --------->AHL20(2)      --------------->AGL15                  --------->AHL20(2)     ---------     <---------YAB1          ----------------->AGL3              --------->YAB1   <---------ARR11(3)     --------->ICU4      <------------CBF                     ----------->GT1    <---------CCA1(2) --------->At5g28300    <---------ICU4<---------YAB1<------------CBF--------->AHL20(2)     --------->YAB1 ---------->GT1  --------->ANAC58  --------->ICU4 --------->ARR11(3)--------->YAB1--------->ARR11(3)<   tactgtaattatacactgcaagaaaaacattgccataaatatgaaaacagaagacattgacagatagtaataaaaataatactatatctctaaatataat  28761400       <---------TOE1(3)                                           --------->LBD16      <---------DOF5.7(2)                                         --------->LBD16    --------->DOF5.7(2)                                          --------->LBD16 --YAB1<---------TOE2(3)                             <---------ANAC58                            <--- --AHL20(2)                                          <---------ANAC58                            <--- -AHL20(1)       <---------ANAC46             <---------ZAT14    <---------LBD16       <-----------GT1 >AHL20(2)     *TSS   ----------->GT1         --------->ZAT14    --------->ANAC46 <---------DEAR3(2) >AHL20(1)---------->DOF2                   --------->ANAC46    <---------LBD16   <---------MYB46(3) ---------At4g35610   <---------ANAC46    <---------ALFIN1      --------->TOE1(2)<---------DREB2C(2)   tcagatgttaacgaaagtcttgtggagtaaaaactgggtttcacacacttcacttgcctctcaatacccgggaaaacaaaatgtcggtttcacttgctac  28761500        ----------->GT1      ---------->DOF2    --------->LBD16   <---------HSFB2a(2)   --------->HSFB2a(2)                --------->ZAT14   --------->ANAC46            <---------TOE1(3)   --------->LBD16             <---------TOE2(3)    --------->TOE2(2)      --------->ALFIN1  --------->HSFB2a(2)     <----------DOF2           --------->TOE1(2)    <---------ANAC58    <-------  <---------LBD16         <---------DAG2--------->bZIP60(1)    --------->ANAC58              <-------  <---------HSFB2a(2)    <---------DAG2 <---------bZIP60(1)    --------->ANAC58  <----------DOF2 <---------LBD16         <---------------AGL15     --------->YAB1        <---------ANAC46   <-------- ------DAG2             ----------------->AG      <---------YAB1         <---------ANAC58   <-------- -------DOF2  ---------->DOF2 <-----------RAV1(2) <---------TOE2(3) ---------->DOF2       <----------   ttttcccggaaagttacaaagtcattcccttttcaggttgtgaagtcacattaacataagagaagaagcaaaaaggcttggagctttattttttgctttt  28761600    <----------DOF2     ------>ZmHOX2a(2)     <----------DOF2 <-----------GT1      <---------ARR11(3)   --------->GLK1(2)                   <---------ICU4 --DAG2               --------->ARR11(3)  <---------GLK1(2)                    -------->HAHB4 ---DOF2   <---------HSFB2a(2)          ----------->ARR10                      --------->ATHB12 -ANAC58   --------->HSFB2a(2)     --------->LBD16               <---------MYB52(2) -ANAC58   --------->HSFC1(1)  --------->ARR14(2)              ---------->DOF2--------->ICU4 -GT1      <---------HSFC1(1)  <---------ARR14(2)   ---------->DOF2    ----------->GT1  --------->At4g35610   ttttttctttcttctagaaaacatgatcttgagtttccgagtaagattcttttaaaaagagtttgcaaagaacgagaaaaatgatggctctgatgaattg  28761700                                                                                 ------>ZmHOX2a(1)                                                                                --------->TOE2(3)                                                                             --------->ARR14(2)                                                                             <---------ARR14(2)                                                                            --------->GLK1(1)                                                                            <---------GLK1(1)                                                                 <---------ARR14(2)                                                                 <---------GLK1(2)             <<<<<<<<<TBF1             <---------ALFIN1          --------->ARR14(2)  <-----------GT1    <-------TEIL                  ------>ZmHOX2a(1)       <<<<<<<<<TBF1  <---------TOE1(2)   tgcatattcatcttcttcttcgtcttcgtctacttcctctcccacttcttcatcatcttcttcttcatattctccaaggtatccttatttccattttgca  28761800                                                                                                    <                                                                                                    <                                                                                                   <-              <----------DOF2                                                                      --            <---------ATHB12                                                                       <-           ------>MYB46(1)                                                                         <-           ------>MYB83                  <----------DOF2                                 <---------ZAT14        --------->MYB46(3)    <---------WOX13(1)                                         --------->ZAT14       -------->P          <---------AHL20(2)                <------ZmHOX2a(1)          --------->ALFIN1      --------->MYB52(1)  <---------MYB52(1)          <---------ANAC46                <---------ANAC46    <---------MYB52(2)   --------->At5g28300     <-----------RAV1(1)                  ---------------   caagagactaaccaatctttgagtcacagttaattgaaattttctttgtttttgttgtttgtaggaacagagagagcatgtttttgcagagtgtagttga  28761900  Previous    Next  AGI:  At1g76620.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G21060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66316.1); contains InterPro domain Protein of unknown function DUF547 (InterPro:IPR006869) Range:  from: 28761415    to: 28764191    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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