Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------At4g35610    <---------ANAC58    <---------ANAC46    <---------ANAC58 --------ICU4 --------AHL20(2) ------->AHL20(2)                                                                     ------->TEIL ------->ATHB51                                                                 --------->LBD16 ----- ------>AHL20(2)                                               --------->YAB1  <---------ANAC55(2)  - -------AHL20(2)                                              <---------YAB1--------->GLK1(2)  <----- -------AHL20(1)   <-----------GT1                         <---------SPL7 <---------ATHB12    <------ -ID1     --------->At4g35610              --------->GLK1(1) --------->SPL7--------->YAB1     -------   attatttcttgtagctaaaatttagcatccaaattccaaactcagagttctcttctatggccgtatgatacttccaataatccgtatgtatgtgaatatc  28745200                                                                         <---------MYB52(1)                                                                      <---------TOE1(2)                                                              --------->ARR11(3)                                                              --------->ARR14(2)                                                  <------MYB83<---------ARR11(3)      --------->YAB1                              <------MYB46(1)     <---------TOE2(2)   --------->WOX13(1)                      --------->AHL20(2) <-----------ARR10 ---->YAB1                                 --------->YAB1    --------->RVE1(1) -------->GLK1(2)             <---------ARR11(3)  ----------->GT1    ------>ZmHOX2a(1)          ----- ----YAB1        <---------YAB1           <<<<<<<<<ARR2  --------->AHL20(2)                <---------MYB59 ---ARR11(3)     --------->ICU4         --------->WOX13(1)   --------->CCA1(1)  --------->ICU4  ----- -->ARR11(3)--------->YAB1    --------->ARR11(3) --------->MYB59    --------->TOE2(2)   <------ZmHOX2a(1)   ataatctatcacaaacataatgaatagtagtagatattaagacaatcaaatttggtagaaaaaatatcttcctacgttgggaattatgtaggaccgaata  28745300                                                      <---------ICU4                                        <---------AHL20(2)                    <---------ICU4                                  ----------->RAV1(1) --------->ATHB12 <--------ATHB1                                 --------->bZIP60(2) <---------YAB1    --------->ATHB12                                 --------->ANAC46  --------->YAB1      -------->HAHB4                                 --------->ANAC58 <---------YAB1      <---------YAB1                              --------->MYB46(3)--------->YAB1        --------->ICU4                             --------->SPL7<---------AHL20(2)       --------->YAB1      <------NtERF2      <---------HSFB2a(2)<---------AHL20(2)      <---------ICU4      <---------At4g35610--------->HSFB2a(2)--------->AHL20(2)     <---------ATHB12             <----    <---------DEAR3(1) ---------->ID1  --------->AHL20(2)          --------->ICU4            <------- ---->YAB1           <-----------RAV1(1)--------->AHL20(2)         <---------ATHB51       --------->ZAT6 ---->AHL20(2)  <---------RVE1(1)--------->ANAC58<-----------GT1 --------->YAB1    <---------YAB1<---   atatagtcggctaattcgatattttgtcgcgaaccacgacataaaattatttatcatcatttgtgaacaataatgattcaaaattatcaataacaccacc  28745400                                                <---------ZAT14                                                --------->ZAT18                                                --------->ZAT14                                                <---------ZAT18                                              <-------MYC3                                              ------->MYC3                                              ------->MYC4                                              <-------MYC2                                              ------->MYC2                                            <-------MYC3                                            ------->MYC3                                           --------->TGA1a                                           <---------TGA1a  <---------ANAC55(2)                                           ==============================================bZIP_DOF                                           ==============================================bZIP_DOF                                         <---------ALFIN1   --------->ANAC55(2)                    ===============================RAV      <---------ANAC58                    ----------->RAV1(2)<---------ALFIN1     <---------ANAC55(1) -----DAG2     <---------MYB52(1)      ----------->RAV1(1)  <---------ANAC58 --ALFIN1     <----------DOF2       --------->PCF2         <-------TEIL          ---------->DOF2 -------DOF2  =======================================bZIP_DOF                 <----------DOF2    <---   ttttttttttaagttcctttacttctggggtctctagagacccacacatgtgcacaaaatatacgtgtgtctctcatagactttaaagcaaaattagaga  28745500                           <---------TOE2(3)                          ---------->DOF2                         --------->AHL20(2)                         <---------AHL20(2)                     --------->AHL20(2)                   ----------->GT1                 ---------->DOF2            --------------->AGL15           ----------------->AG                                      --------->AHL20(2)           ----------------->AGL3                        --------->DAG2           ----------------->AGL1               ----------->GT1  <---------ARR11(3)             <----           ----------------->AGL2        <---------AHL20(2)      --------->ARR11(3)             -----    <---------YAB1--------->DAG2         ----------->TBP--------->DAG2               *TSS  <---------YAB1 ------ZAT14<---------------AGL15      ----------->TBP ---------->DOF2<---------AHL20(2) --------->YAB1   acacttatttttagccaaaaaaagtaattaaagaaaaaactatataaaaacagtttaaaaaggggatgatattaaatgattttcatgtgaattataaaac  28745600                                                                            ------>ZmHOX2a(1)                                                                         <---------ATERF1(1)                                                                         ------>NtERF2                                                                        --------->DEAR3(1)                                                                        <---------ALFIN1                                                                       --------->RAP2.3(1)                                                                       <------NtERF2                                                                       --------->DEAR4(2)                                                                       --------->ATERF1(1)                                                                      --------->ABI4(1)                                                                      <---------ATERF1(1)                                                                      ------>NtERF2                                                                     --------->RAP2.6(2)                                                                     --------->RRTF1(2)                                                                     --------->DEAR3(1)                                                                     --------->RAP2.3(2)                                                                     <---------ATERF1(2)                                                                     --------->ATERF1(2)                                                                     --------->DREB2C(2)                                                                     --------->RAP2.3(3)                                                                     --------->RRTF1(3)                                                                     <---------ALFIN1                                                                    --------->RRTF1(1)                                                                    <------NtERF2                                                                    --------->ORA47(2)                                                                    --------->DEAR4(2)                                                                    --------->ERF1                                                                    --------->RAP2.6(1)                                                                    --------->RAP2.3(1)                                                                    --------->ATERF1(1)                                                                   <---------RAP2.3(1)                                                                   <---------DEAR4(2)                                                                   ------>NtERF2                                                                   --------->At4g35610                                                                   <---------DREB2C(1)                                                                   --------->DREB2C(1)                                                                   <---------ATERF1(1)                                                                  <---------ATERF1(2)                   ------>MYB83                                   --------->ANAC46                   ------>MYB46(1)                                <---------DEAR3(1)             ----------->HVH21                                    --------->DEAR3(1)           <---------ANAC58                                      --------->MYB46(3)            ------           --------->YAB1               --------->TOE2(3)        --------->RAP2.3(1)       <---------ARR14(2)           <---------ANAC58     --------->ANAC58                 --------->ERF1    --------->ZAT14       <---------YAB1           --------->ANAC58          --------->At4g35610      <---------ZAT14 -----ANAC55(2) --------->DEAR3(2)      --------->TOE1(3) <---------At4g35610    --------->ANAC46 --- ---->ANAC55(2) XXXXXXXXXXXXXXXXXXXXX>MIR833-3P    <----------DOF2--------->RAP2.6(2)      --------->ARR14(2)   gtattgagtattatcgtgaccgacttcaaaaaacaagaaaaacctcaacttctctttttcagctatagccgccgcctcctcccactaaactcaaatcctc  28745700                                                                               <---------GLK1(2)                --------->ARR14(2)     <---------At4g35610                --------->ATHB12                <---------ARR14(2)     <---------ZAT2                   <---------WOX13(1)                <-----------ARR10      --------->ZAT2                 <---------MYB46(3)     <-------          --------->WOX13(1)           --------->At4g35610            --------->ATHB12      ---------     <----------DOF2               <---------REM1(1)                 <---------YAB1         <-------- >ZmHOX2a(1) --------->YAB1 --------->ZAT14                  --------->YAB1 <---------WOX13(1) ------>YAB1<---------ATHB12<---------ZAT14     --------->YAB1     --------->YAB1    <----------DOF2   tcatagtcttttcaatcaaatctgctcttcttcactgttgaagctggctatcaaaactcacaataactatggtgattgattgattctctttcttacttaa  28745800                                                                                --------->At4g35610                                                                           <---------YAB1                                                                        --------->ICU4                                                                        <---------YAB1                                                                      --------->YAB1                                                                     --------->ICU4 --MYB59                      <<<<<<<<<GT-1                          <---------ATHB12     <---------ARR11(3) >ANAC55(2)        <---------GLK1(2)                             --------->DEAR3(2)--------->At4g35610 -ANAC55(2) <----------DOF2   <-----------GT1                 ----------->HVH21 <---------At4g35610   ctctgttttagtttctttgcaaattcttatattaaccatttggaactggtctaaacattcttcagggaccgatgatgatgagagcagaagaagataacta  28745900                                                                            ----------->RAV1(1)                                                                      --------->At4g35610                                                                      ------>NtERF2                                                                      <---------At4g35610                                                                      <---------ATERF1(1)                                                                     --------->DEAR3(1)                                                                   ------>NtERF2                                                                  --------->ANAC58           <---------ALFIN1                                       --------->ANAC58         ------>ZmHOX2a(1)                                        --------->ANAC46     --------->ARR14(2)                                       <<<<<<<<<GATA-3     <---------ARR14(2)                                       <<<<<<<<<GATA-1              ---------- --------->YAB1                                               <<<<<<<<<GATA-2            --------->ZAT18 --------->TOE2(3)                                            <<<<<<<<<GATA-4   ---------->DOF2 >>>>>>>>>RAP2.2                                   <<<<<<<<<NAM   --------->O2--------->MYB46(3)   caatctaaatcctccaccatggctaatcccaatgctaagagcaaactacttcatcccttgttcaatccacgccgcttccaacaaaagcgagtgcaacatg  28746000                                                                               --------->YAB1                                                                            <----------DOF2                                                                         <---------ARR11(3)               ----------->RAV1(2)              --------->YAB1          <---------GLK1(2)      <---------WRKY18(1)                      <---------ATHB12       --------->LBD16               <   <---------ANAC58     <----------DOF2      --------->WOX13(1)      <-----------RAV1(2)         <---   <---------ANAC58  ------>NtERF2       --------->At4g35610       ------>ZmHOX2a(1)         <------- ->RAV1(1)     <---------At4g35610    <---------MYB52(1)--------->MYB46(3)<-------TEIL      <--------   ttctgtcttgactgttcttctgaggccttttgctcttactgtttgctcaatcacagaaaccatcgtgtcctccaggttctttcatcaacttcaaatcatt  28746100  Previous    Next  AGI:  At1g76590.1    Description:  zinc-binding family protein. similar to zinc-binding family protein [Arabidopsis thaliana] (TAIR:AT1G21000.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96587.1); contains InterPro domain Protein of unknown function DUF597 (InterPro:IPR006734) Range:  from: 28745585    to: 28747101    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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