Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                <---------ANAC58  <--                                                                           ---------->DOF2       ----                                                                          ===========================                                                                          ===========================                                                                      <---------SPL7             <---                                                                      --------->TOE1(2)          ----                                                                  <---------WRKY18(1)            <---                                                                 --------->ETT(2)            -------- <---------AHL20(2)                                              --------->WRKY12           <-------- --------->AHL20(2)       <---------MYB59                        <---------ETT(2)       --------->ATHB51 -----DOF2               <---------At4g35610                     --------->WRKY38(1)    --------->AHL20(2) -ARR14(2)               <-----------------AGL1                <---------At4g35610     --------->ICU4 -AGP1                 <-----------GT1       <---------TOE2(3) --------->At4g35610     <---------YAB1 -ARR11(3)            ----------->HVH21  --------->YAB1        <-------GAMYB    <---------ANAC58 ---- >ARR11(3)        <---------AHL20(2)   --------->AHL20(2)     <-----------RAV1(1)    --------->YAB1-- >ARR14(2)       <---------YAB1      <----------DOF2     <-----------GT1  <------ZmHOX2a(1) ---------   taaaaaaatggatttgtttattatttgacctgatttgggcttttaataaggcttcttatttactctgttgaccgtaggaaaggcctgtcattatttaaag  28732700       ------->GAMYB     ------>MYB83     ------>MYB46(1)     --------->At4g35610    --------->MYB52(1)   <---------MYB111(1)   --------->MYB46(3) -------->P ------>CCA1(2) ----ZmHOX2a(2) ----->AGP1 ====HOX2a_HOX2a =====HOX2a_HOX2a ------ARR14(2)                                  --------->YAB1 ----->ARR14(2)                             <---------AHL20(2) ------ARR11(3)                       <------MYB83 <---------YAB1 -->DOF2                              <------MYB46(1)              --------->AHL20(2) -AHL20(2)                            <---------ANAC55(2)       --------->YAB1 ----->ARR11(3)                       ----------->GT1          <---------YAB1            --------->ARR11(3) ---->ZmHOX2a(2)                     --------->MYB111(1) <---------YAB1                  <---------ARR11(3) >AHL20(2)        --------->WOX13(1) --------->MYB59  --------->ICU4            <---------ZAT6   atctaccaactgaatttcatcagtcagtatcgatgggattaggtatattaatggtaattgttattttcataatataggcctagtgtgataagacctcaaa  28732800                                                                    <------ZmHOX2a(1)                                                          <---------YAB1                            -                                             --------->YAB1     ---------->DOF2                 -----                                         ---------->DOF2--------->YAB1                    <---------HSFB2a(2)                 <---------YAB1      --------->YAB1    <---------YAB1           <------MYB83 <<<<<<<ZML2          --------->YAB1            <---------AHL20(2) --------->ICU4           <------MYB46(1)<-----       <----------DOF2       <------ZmHOX2a(1)     --------->ARR11(3)     ---------->DOF2 --------->HSFB2a(2)   aacaataagctttgatattacgatgagagtaggagtatataataaaagcataagattatgatgatacaaaggacatcaaagttggtgaacacctagaaca  28732900                       --------->ZAT2             ---------->DOF2                      <---------DAG2         <------MYB46(1)            <---------ANAC58         <------MYB83  --------->At4g35610     ------->GAMYB        --------->MYB59<---------At4g35610    --------->MYB46(3)        <---------AHL20(2)        --------->MYB46(2)        <---------YAB1  --------->TOE2(3)  --------->AHL20(1)        --------->MYB111(1)  <---------AtLEC2 <---------MYB111(2) --------->YAB1       <--------P      <---------ZAT2         <---------MYB46(2)  --------->AHL20(2)                < --------->DOF2      <---------WRKY12 <---------CCA1(2)         --------->AHL20(2)                  - ------>RAV1(1)    <-----------HVH21<---------ANAC58  <---------YAB1 <---------AHL20(1)          <--- -----ID1----------->GT1 <----------DOF2 --------->TOE2(3) ----------->GT1     ---------->DOF2 <-----   acaaaaggagtaggtaaaaggggtcagctttgcattgtgcttatctcaactaccttatgagaagaaaataatatttttttctaaagtcaaatgtttgatg  28733000                                                            <---------WOX13(1)                                                           <------------CBF                                                          --------->ATHB12                                                         <---------YAB1 ---------ZAT14       --------->AHL20(2)                 --------->ICU4           <---------YAB1 -------->ZAT14  ------>NtERF2   ----------->GT1        <---------TOE2(3)       <-----------GT1 ------ANAC46    --------->LBD16 <---------ANAC55(2)<------------CBF           --------->ICU4    ---- ----YAB1       --------->RAP2.6(2)      --------->YAB1--------->YAB1<----------DOF2      --------->ZAT14   agtgtagtttggataatgccgcattaaaaaaaaaaacgtgaaatgacaatcgaacattgatgattggagggcttatttgtaattacgataactatagtca  28733100                                                                                               ------                                                                                              <------                                                                                              -------                                                                                             --------                                                                                             <------NtERF2                                                                                            <--------                                                                                            ------>NtERF2                                                                                           --------->DEAR3(1)                                                                                           <---------DEAR3(1)                                                                                           ----------                       ----------->GT1                                                    <------NtERF2                      --------->DAG2       ---------->DOF2                               <---------ATERF1(1)                    ---------->DOF2      --------->HSFB2a(2)                            <---------DEAR3(1)                   <---------AHL20(2)    <---------HSFB2a(2)                      <---------LBD16             --------->YAB1         --------->HSFB2a(1)            <-------TEIL ------>ZmHOX2a(2)            --------->AHL20(2)      <---------HSFB2a(1)      --------->ANAC58 <---------ARR11(3)    < ----->MYB52(1) --------->YAB1---------->DOF2  *TSS          --------->ANAC58 --------->ARR11(3)<----   aacggcccaaaccattaataataaaaggtgaataaagaattttctgaaagacgaagaagagaaacgaaattcgtagaaatgatctcgggctcggcgacgg  28733200                           ---------->DOF2                      <-----------TGA1                      <-----------HVH21                             <---------ANAC58                      --------->LBD16  <---------DEAR3(2)           <---------ANAC58 >NtERF2             --------->ANAC46  ------>NtERF2                --------->ANAC55(2) ---DEAR3(1)         <---------ANAC58 <---------DEAR3(1)           <---------TOE2(3) -->DEAR3(1)         --------->ANAC55(2)          --------->At4g35610  <-----------HVH21 ->ATERF1(1)         <---------ANAC58 --------->DEAR3(1)          <-----------GT1 -ATERF1(1)      <---------ANAC58    --------->ATERF1(1)      --------->AHL20(1) ->HVH21    <-----------RAV1(1)     <---------ATERF1(1)       --------->AHL20(2) -----------HVH21<---------ANAC58  ----------->HVH21          <---------AHL20(1) --NtERF2   --------->ALFIN1      --------->DEAR3(2)    <------ZmHOX2a(2)   cgagtcatgggagagtgttgcttccgtcacaaagggagcgacggcccgtctcaactggatcaaatattttacgtttcagagaaacagtaccgagacaatt  28733300                                <---------ARR14(2)                                --------->ARR14(2)                         <------NtERF2                        ------>NtERF2                       <---------DEAR3(1)                       --------->ATERF1(2)                      --------->ATERF1(1)                      <------NtERF2                     ------>NtERF2                                     <---------YAB1                     <---------ATERF1(1)                       --------->MYB52(1)  --------->DAG2           ----------->TGA1---------->DOF2                   <---------MYB52(2)   ---------->DOF2     <---------YAB1 <---------DEAR3(1)                 <------ZmHOX2a(1)       <------ZmHOX2a(1)-----     --------->ICU4 ----------->HVH21 <----------ID1  ----------->GT1<---------At4g35610       ------   cagcctgatgatggtgacgaaggcgacggcaaagtatatggggacgaagatgagggaggagaaactatcggagatgatagaggagaaagtgaaggaagcg  28733400                                                                                               <-----                                                                                               ------                                                                                           <------ZmHOX2a(2)                                                                                           ==========                                                                                          --------->ARR11(3)                                                                                         ============                                                                                    =================                                                                                    ------>ZmHOX2a(2)                                                                                   <------ZmHOX2a(2)                                                                                   =============HOX2a_HOX2a                                                                                   --------->CCA1(2)                                                                                  --------->ARR14(2)                                             --------->ALFIN1                     --------->ARR11(3)                                      <---------ZAT6                              <---------ARR11(3)                                  <---------ZAT14                                 <---------ARR14(2)                                  --------->REM1(2)                               --------->AGP1                                  --------->ZAT14                                 <---------AGP1                                 --------->ALFIN1                                 <-----------ARR10                               <---------ANAC46<---------SPL7                    <---------CCA1(2)                           <------NtERF2   <---------ANAC46                     ----------->ARR10        <---------ANAC58 --------->ETT(1)  <---------ANAC55(1)                <---------At4g35610        <---------ANAC58 <---------ANAC46  <---------ANAC58            --------->ANAC58  <------ZmHOX2a(1) ------>RAV1(1)        <-----------HVH21   <---------ANAC58            --------->ANAC58  ============ ----->HVH21   <------NtERF2  <------ZmHOX2a(1)----------->HVH21    --------->WRKY18(1)<---------TOE2(3)   acagaggtttgcgaggcggaagagatgtcggaggagtgtagagttgcgtgggacgaagttgaagaagtgagtcaagccagagcagatctgaggatcaagc  28733500                             --------->GLK1(2)                 ============================HOX2a_HOX2a                 ------>ZmHOX2a(2)                =============================HOX2a_HOX2a                --------->ARR14(1)                <------ZmHOX2a(2)               <---------ARR14(2)                                  --------->TOE1(2)               --------->ARR14(2)                                <---------ARR11(1)           --------->YAB1    <---------ARR14(2)                  <---------ARR14(2)     --------->ANAC55(2)     --------->ARR14(2)        <---------TGA1a   <-----------GT1 --------->At4g35610             --------->DEAR3(2) ----At4g35610 <---------ARR11(3)             --------->LBD16    ------->TEIL --->At4g35610<------ZmHOX2a(1)           --------->GLK1(2)--------->ALFIN1 ====================HOX2a_HOX2a          <---------ARR14(2)     --------->ARR14(2)                 < =======================HOX2a_HOX2a       --------->ARR14(2)    <---------ARR14(1)          <-------- ====================HOX2a_HOX2a      <------ZmHOX2a(1)--------->TGA1a                      <-------- ======================HOX2a_HOX2a <-----------RAV1(2) <---------O2--------->TOE2(2)        <--------   tgaagttactgaatcaggatccgctcgagagtttctgccaggagaatccagagaccgacgagtgtcgaatctacgaagactaaaatttgagttttcgtgt  28733600  Previous    Next  AGI:  At1g76560.1    Description:  CP12-3. similar to CP12-1 (CP12 domain-containing protein 1) [Arabidopsis thaliana] (TAIR:AT2G47400.1); similar to unknown [Picea sitchensis] (GB:ABK26381.1); contains InterPro domain Protein of unknown function CP12 (InterPro:IPR003823) Range:  from: 28733147    to: 28733747    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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