Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------AHL20(1)                 --------->AHL20(1)<---------ZAT6           --------->ANAC55(2)   ----------->GT1    <-----------GT1           --------->STY1(2)             <---------------AtSPL8  --------->CCA1(2)           <---------STY1(2)           --------->YAB1 <---------ARR11(3)   <---------AHL20(2)                 <---------YAB1 --------->ARR14(2) --------->AHL20(2)                 --------->YAB1                     <---------GLK1(2) --------->ARR11(3) <---------AHL20(2)      ----------->GT1 <---------------AtSPL3 <---------YAB1   caagatatactatatgtaatatataaatttgtagctagtgaaactgtggaaaaacaaaaattatagtactgaaacattttagtttatgaaacgattcttc  28722900                                                           --------->At5g28300                                                          ----------->GT1    <---------ARR14(2)                                                  <-----------GT1            --------->ARR14(2)  ----                                                <----------DOF2 --------->ANAC46   <---------ARR11(3)                 ------->GAMYB            <---------YAB1--------->SPL7  ----------->RAV1(1)    ------              ----------->RAV1(1)     --------->TOE2(3)--------->MYB52(1)   --------->GLK1(1)--------             --------->MYB46(3)     <---------TOE2(3) <---------SPL7   <----------ID1        --------   agaaaatagatgacaacaacagaagtttttttaaaatcaacgttattgttctttaccatacggtaaacacaatgcgacatatccacatcttcagcaagaa  28723000                                                                                                  <--                                                                                                 <---                                                                                              <------MYB83                                                  --------->HSFB2a(1)                         <------MYB46(1)                                                  <---------HSFC1(2)                         --------                                                  <---------HSFB2a(1)                        --------                <-------MYC2                      <---------MYB46(3)                         --------   ----------->GT1    ------>ZmHOX2a(1)       <---------YAB1                                 -------- ---------->DOF2------->MYC3               ----------->HVH21                                 <------- ----->MYB46(3) <-------MYC3               ----------->TGA1                                  <------- --->ARR14(2)   ------->MYC2  --------->At5g28300 --------->HSFC1(2)                  ---------->DOF2 ->ANAC58      --------->ANAC58     --------->MYB52(1)                  <----------DOF2     <--------P ->ANAC58      --------->ANAC58     ---------->DOF2         <---------YAB1         --------->At4g35610   ccacaaagtaacatggcacgtttcctagtcgctgtgactaaaggcatgacgatggttcccttataatttgtattctttttttctcagataaagagttggt  28723100      <-------TEIL     --------->ANAC58   --------->YAB1      --------->ANAC46  <---------YAB1       <---------ANAC55(2) -----GAMYB<---------MYB46(3)      --------->YAB1 ------MYB46(3)        --------->ANAC55(2)       <---------ARR11(3) ->ALFIN1<---------MYB52(1)      --------->AHL20(1)                         ----------->GT1 ->MYB111(1)           --------->ANAC55(1)       --------->ARR11(3)      ---------->DOF2 ->MYB55(2)<------MYB46(1)       --------->AHL20(2)                 ------>ZmHOX2a(1) ->MYB111(2)          <---------LBD16 <---------ICU4                <---------------AGL15 --AtMYB61<---------TOE2(2)     --------->YAB1  <---------CCA1(2)   --------------->AGL15 --MYB46(3)<------MYB83--------->ANAC58    --------->ZAT6------>ZmHOX2a(1) --------->DAG2          <-   ggttatgatacgttggttttttcatacggaacaaaaataatacttactctatatctctccttcactcttcctctaaaaaggtaactataccatttcattt  28723200                                                         --------->CCA1(2)                                                        <---------AHL20(1)                                                        --------->ARR11(3)  --------->GLK1(2)                                                  --------->ANAC55(2)      <---------GLK1(2)                            <------------CBF      <---------ANAC55(2)      --------->ARR14(2)                          <-------TEIL            ----------->GT1        *TSS         <---------HSFB2a(2)                       <------MYB46(1)         <---------ATHB12   <---------YAB1      --------->HSFB2a(2)                       <------MYB83 <----------DOF2     <---------AHL20(2) <---------ARR14(2) --------GLK1(1)    <---------MYB52(1)   --------->TOE2(3)        <---------TOE2(3)<----------DOF2<--   gatttctccataagttatcgtcgtttggttcattgtttctttatctcaaatcatgtaatatatggattaagtttgcagattctaacttttggaagtagag  28723300                                                                       <---------AHL20(2)    --------    <----------DOF2                                                    --------->AHL20(2)  --------->WRKY18(1) ------->TEIL<---------MYB46(3)                <----------DOF2 --------->At4g35610   <---------REM1(2) -------REM1(1)         <-------TEIL    <---------ANAC46   --------->TOE2(3)       <---------ETT(2)   atgaagcttttggagttgttcatagcttcatcgaaaccagttgtggagactttgttgataacatcagttggattttatttggctctcgacacagtcaatc  28723400              --------->ANAC46              --------->ANAC58               --------->ZAT6          <---------YAB1                   <-----------GT1                     --------->TOE2(3)       <---------YAB1                     <-----------GT1         --------->TOE2(3)       --------->ICU4                <---------MYB52(1)         --------->GLK1(2)                   < ->WOX13(1)   --------->ANAC58    <-------TEIL       <----------DOF2 ---------->DOF2       <---------   ttcttggtcatgatgctcgcaaacatttgaacaacgtccgttttttaactctcttctttaacaaataatctaaaagagttaacttaaatttctcttttgt  28723500                                                            <---------ZAT6                                                            ----------->GT1                                                      ----------->HVH21                                                    <---------At4g35610                                                 <----------DOF2                                                <----------CDC5                                              --------->RAP2.6(2)             <------MYB46(1)                                            <---------At4g35610  <---------ANAC55(2)                                    --------->ATHB12--------->At4g35610       <------MYB83 ---------ANAC46                   <----------DOF2  <---------ZAT2     ---------->DOF2 -DOF2 <---------GLK1(2)      ------>ZmHOX2a(1)--------->At4g35610   <---------YAB1   ttgtgtatagattgtcttctatgtgtttagtccttcgcttattggaagccgcttagctgatagtgttacatatgaaagcttggtcaaaatgtaagtcaat  28723600                                                           <---------MYB52(1)                      <-                                                           <-------PIF5                            <-                                    --------->YAB1         ------->PIF5                            <-                                   <---------YAB1         <---------ZAT2                         <---                                 --------->YAB1           <---------At4g35610      --------->At4g35610                                --------->ICU4          <-----------RAV1(2) <---------TOE1(3)  ------                      <---------ZAT18              <---------AtLEC2         <---------TOE2(3)  <-----                      --------->ZAT18          --------->GLK1(1)        <-------GAMYB         <------                    --------->At4g35610       --------->ARR14(2)       --------->LBD16        -------                    <---------At4g35610    <---------TOE2(3) <---------MYB46(3)    <---------At4g35610               <----------DOF2  <---------YAB1<---------ARR14(2)      <---------ANAC46      ---------             <---------YAB1   --------->YAB1 <------ZmHOX2a(1)       <---------LBD16       <-------TEIL   atcaaattttgcatcatctttaagctcacttgttataatgaaaatgaggatttgcattgcaggtggtttatgccggttaatgttctgctcacattcatga  28723700     <---------MYB52(1)    <-------GAMYB   --------->MYB52(2)   <---------MYB46(3)                                            --------->TOE2(3)  <-------TEIL                                                  <--------HAHB4 --------MYB46(3)                                    <---------ANAC46 -----MYB46(1)                                      <-------TEIL--------->ATHB12 -----MYB83                                       <---------GLK1(2) ------WOX13(1)               --------->ICU4     --------->ZAT2 <---------ICU4                     <- --->ATHB12          <---------YAB1              <---------ZAT2<---------YAB1                      -- ----ICU4   <---------ZAT2  --------->YAB1       --------->At4g35610   <---------MYB46(3)   --------- ---YAB1    --------->At4g35610                  <---------At4g35610--------->MYB52(2)      --------- -->ICU4    --------->ZAT2 <---------YAB1  <-----------HVH21   --------->ICU4     <---------HSFB2a(2) >YAB1      <---------At4g35610            ------>ZmHOX2a(1)   <---------ATHB12   --------->HSFB2a(2)   ttggttcgttactcggctggattgttattgtcataactaagcctccttcacagcttcgtggtctcatcattagttgttgtgcttctggtacaaaccttga  28723800  Previous    Next  AGI:  At1g76530.1    Description:  auxin efflux carrier family protein. similar to auxin efflux carrier family protein [Arabidopsis thaliana] (TAIR:AT1G76520.2); similar to auxin efflux carrier family protein [Arabidopsis thaliana] (TAIR:AT1G76520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68504.1); contains InterPro domain Auxin efflux carrier; (InterPro:IPR004776) Range:  from: 28723273    to: 28725265    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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