Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------MYB52(2)                                               --------->ANAC46                                               --------->ANAC58                                               --------->ANAC58                                              <---------------------WRI1                                     --------->ANAC58                      --------->TOE2(3)     <---------ARR14(2)                 <---------YAB1      --------->ANAC46                                          ------             --------->TOE2(3)       --------->ANAC58    ---------->DOF2                       <-----     --------->At4g35610      <---------ZAT6--------->ARR14(2)                     <---------------AGL15 -TEIL  ---------->DOF2       ----------->GT1--------->CCA1(2)      <----------DOF2==================   tcttctcagataaagccttattattctcaatagtgttatacgacaatatacgaaacaaacaaagaccccgcttgagttgagttttccaaaaattgtggaa  28719600                                          ----------->GT1                            --------->YAB1                                         ----------->GT1                            <---------YAB1           <----------DOF2           <---------AHL20(2)                        <---------ARR11(3)       <----------DOF2            --------------->AGL15                        --------->ARR11(3)     ------>ZmHOX2a(1)      ----------->GT1                             --------->TOE1(2) --->ARR14(2)    <XXXXXXXXXXXXXXXXXXXXMIR778                            --------->TOE2(2)   --------- ----ARR14(2) --------------->AtSPL8 --------->AHL20(2)        <------ZmHOX2a(1)--------->CCA1(2) =================================================MADS_MADS---------->DOF2 --------->ANAC55(2)   ctgtttcctctttctttttgtacataaactaggttacaaaaaattggaaaatatacaaaatcaaaggacataaacttacgagatatatcataactcataa  28719700                                                                --------->ANAC46                                                           <----------DOF2                                                          <---------ANAC58                                                     <-----------RAV1(1)                                             --------->ANAC58   --------->ANAC58                                             ----------->GT1    --------->ANAC55(1)                                             --------->ANAC58   <---------ANAC55(2)                                             <---------ANAC55(2)--------->ANAC55(2)                                ----------------------->TaNAC69(2)                                <---------YAB1--------->TOE2(3)<---------LBD16                         <---------MYB59 --------->YAB1   <---------ANAC46                        <---------At4g35610  --------->ANAC55(2)--------->ANAC58                        --------->At4g35610 <-------TEIL  <---------ANAC58                         --   ---------->DOF2 --------->DAG2       <---------YAB1 ---------->ID1                          ------ >YAB1            ---------->DOF2  ------->TEIL<---------MYB52(1)                      ---------->DOF2   gttgtgaaagttggaattcaaaaaggagctaactatgaatctatgatacgttattttgttgcttatacggaacaaaacaattccaaaaacaaagaagatg  28719800                                                                                                   --                                                                                                   --                     ------>NtERF2                                                              <----                    --------->LBD16                                                         ---------                  <---------LBD16                                                           <--------             <---------ARR14(2)                                                             <--------ATHB1             --------->ARR14(2)                                                             ---------         <---------LBD16                                                                    <--------     ----------->HVH21--------->SPL7                              --------->GLK1(2)      --------->YAB1 -------->DOF2<------ZmHOX2a(2)                    <------ZmHOX2a(1)          <-------MYC3 --------->ICU4 ----->GT1 --------->LBD16    <---------------AtSPL8 ----------->GT1          ------->MYC3 <---------YAB1   taaaagtctgacccggatcatgcggacaccaagttgtacatacaaaatatgtaggatgaaaatatgaaattctcttcccatatgcatagaataataattt  28719900 ------->TOE1(3) ------->TOE2(3)                                   <---------ANAC46 -------GT1                                        <---------ANAC58 >ATHB51                                           <---------ANAC58                  --------->AHL20(2) -AHL20(2)                           ---------->DOF2                    *TSS   --------->ANAC58 >AHL20(2)                          --------->AHL20(2)             <---------ANAC46  <---------AHL20(2) -ICU4                         ----------------->AGL3     ---------->DOF2      --------->ANAC58   accttagttaaaaagattagtttctaagtttgccccaaataaagagattagtttcttgaaaaaagcattttgtggatagacaagaatttaaatagaatga  28720000                                                                                        <------NtERF2                                                                                        --------->ATERF1(1)                                                                                        <---------At4g35610                                                                                       <---------ERF1                                                                                       <---------DEAR3(2)                                                                                       <---------RAP2.3(1)                                                                                       ------>NtERF2                                                                                       <---------ATERF1(1)                                                                                      <---------RAP2.3(2)                                                                                      <---------RAP2.6(2)                                                                                      <---------RAP2.3(3)              --------->ALFIN1                                                      <---------RAP2.3(1)              <-----------RAV1(1)                                                 --------->SPL7        --------->ANAC58                                                      <---------YAB1        --------->ANAC58                              --------->YAB1     --------->HSFC1(2)--------->At4g35610        --------->AtLEC2                           <----------DOF2       <---------HSFB2a(1)   ------>NtERF2                             <----------DOF2             --------->HSFB2a(1)      <--  ----------->HVH21                     --------->ANAC58                 <---------HSFC1(2)<---------At4g35610  --------->DEAR3(1)                    --------->ANAC58               ---------->DOF2<---------DEAR3(1)   agaggcgaccatgcaagtgttgtactaggccaaattttggagacgctctttctctttcatagagagagagtgagaaagttctgatacggcggcttctcac  28720100                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                              <------                                                                                              -------                                                                                             <-------GAMYB                                                                                            <--------                  <---------TOE2(3)                  --------->AHL20(2)                     <--------                ----------->TGA1              ----------->GT1                           <---------DEAR3(1)              xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <---------AHL20(2)      --------------------->WRI1 ---------HVH21 ----------->HVH21     ------>ZmHOX2a(1)  <-------TEIL    <---------WOX13(1)<---------DEAR3(1)   tgtcatctagctgtaccactgacgataaatctctctcttcctctaaatcggttaaaaaattcattcccttcttggattgctctgttttcttcggcggttc  28720200         <---------ATHB12  --------->ZAT2  <---------At4g35610  <---------ZAT2  --------->At4g35610 -----ANAC58 -----ANAC58                      <---------MYB52(1)             ----------->GT1 ----MYB46(3)              --------->At4g35610      --------->GLK1(2) ---ARR14(2)               <---------At4g35610     --------->ARR14(2)                      <---------At4g35610 -->ARR14(2)            <---------At4g35610        <---------GLK1(2)                <----------DOF2 -DEAR3(2)              ------>ZmHOX2a(1) <---------YAB1  <---------ANAC46    <---------REM1(1)  ---- -MYB46(3) <---------GLK1(2)    <---------ZAT6     <---------ARR14(2) ---------->DOF2      --------->At4g35610   ttgcagctccattgattctctgtttcctctgctacagttaacttatacttgcagattctcgcgttgatagtaaaaagatggtgaagcttttggagctgtt  28720300                                                                                                    -                              <-------GAMYB                                                         -                          --------->GLK1(2)        <---------AHL20(2)                     <---------YAB1                         <---------GLK1(2)      --------->ARR14(2)                     --------->ICU4                       ----------->ARR10        <---------ARR14(2)                     <---------YAB1 ----->YAB1       <---------MYB46(3)   --------->TOE2(3)                 --------->WOX13(1)   -------   cataacttcatcaaaaccagtcgttgagattctgttgataacatcagtcggattttatatggctctcgatggagtcaatcttcttggtcatgatgctcgt  28720400                           --------->ANAC55(2)                           <---------ANAC55(2)                      --------->YAB1                  <---------AHL20(2)                <-------GAMYB               --------->MYB52(2)               ----------->GT1            <-----------TGA1            <-----------HVH21                                -------->HAHB4            --------->TOE2(3)                                --------->ATHB12 --------->ARR11(3)   <---------ICU4            --------->YAB1                                     <- <---------ARR11(3)  --------->ICU4          --------->TOE2(3)       <----------DOF2               <- -------->CCA1(1) --------->AHL20(2)         <----------DOF2<---------ATHB12                 -------- -------->RVE1(1)<---------MYB52(1)     <----------DOF2--------->TOE2(3)            <---------MYB52(1) ---->GT1  --------->bZIP60(2)     <-----------GT1 <---------AHL20(2)--------->TOE2(3)      <--------   aaatatctgaacaacgtcagttaattatcacttaattttactcttttctttaataaatctaaatgattcaactttaatatgtctctgttttgttatcatt  28720500  Previous    Next  AGI:  At1g76520.1    Description:  auxin efflux carrier family protein. similar to auxin efflux carrier family protein [Arabidopsis thaliana] (TAIR:AT1G76530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68504.1); contains InterPro domain Auxin efflux carrier; (InterPro:IPR004776) Range:  from: 28719972    to: 28722310    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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