Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <------NtERF2      ------>NtERF2 ----->KAN4(2) ---->HSFB2a(1)            <---------ICU4 -----HSFB2a(1)    ----------->GT1                                             ---------->DOF2 ---->KAN4(1)   <---------ZAT2                                           <---------MYB52(2) -----KAN4(1)   --------->ZAT2--------->ARR14(2)     <----------DOF2--------->ANAC58              --- -----HSFC1(2)  <---------At4g35610            ---------->DOF2      --------->ANAC46              <-- ---->HSFC1(2)  --------->At4g35610  ------>ZmHOX2a(1)              --------->ANAC58   --------->GLK1(2)   attcttggtgccagtgagagctggtttaatcagttcttcctgaatgttttaaagactttgttagtgattcaagaaacaaacaaaagaagaatctatgtaa  28695900                             --------->DAG2                       --------------->AGL15                       <---------------AGL15                         <---------YAB1                       ------>ZmHOX2a(1)                           ------->GAMYB              <------                  --------->GLK1(1)                                --------->YAB1          --------->REM1(1)                  <---------GLK1(1)                               --------->MYB46(3)       --------->YAB1                 --------->ARR14(2)                    --------->ANAC58               --------->ARR11(3)         <-----------HVH21 ---------->DOF2    --------->CCA1(2)  -------->P           <---------ARR11(3) ------>ARR11(3) <---------ARR14(2)  <------ZmHOX2a(1) --------->ANAC58           ---------->DOF2 -------ARR11(3)<------ZmHOX2a(1) <-----------RAV1(2)  --------->ANAC46     <---------ANAC46  -------   gaacttgcctctgtgagaggaactccttcaaaaggcacaggagaagcgatatggaaaacgccagagcaaccatcaatggctgagaaaagaccttcatcat  28696000                                                             --------->KAN4(2)                                                   ------>ZmHOX2a(1)                                                  --------->TOE2(3)                                                  --------------->AGL15                                                  <---------------AGL15                                                 ----------------->AGL3                                                 <-----------------AGL3          <---------ANAC46                       <-----------------AGL1    <---------ARR14(2)                           ----------------->AGL2                           ---    --------->ARR14(2)                           ----------------->AGL1   --------->At4g35610     ---    --------->GLK1(2)    --------->ARR11(3)      ----------------->AG     ----------->RAV1(2)     ---    <-----------ARR10    <---------GLK1(2)       <-----------------AG--------->YAB1       <------ZmHOX2a(2) ---ICU4  <---------ANAC58                       <-----------------AGL2   <---------At4g35610     --- -->YAB1  <---------ANAC58<---------RVE1(1)    --------->ARR14(2)<----------DOF2<<<<<<<<<<<<<<<<<LFY   caaacaaatctgccttgaaaagtttcagattttttgaagcattatccagtttcctcaaatggtcattcttttcatcacctgagaacaatgggatcaatgc  28696100                                                                                                   <-                                                                                                <----                                                                                                -----                                                                                        --------->HSFB2a(2)                                                                                        <---------HSFB2a(2)                             --------->KAN4(1)                                         ------>ZmHOX2a(2)                             <---------KAN4(1)                                        <------ZmHOX2a(2)    <---------DAG2          <---------ARR14(2)                                        --------->GLK1(1)    <----------DOF2         --------->ARR14(2)                                       --------->ARR14(2) ------>ANAC58              <---------KAN4(2)           <---------ARR14(2)           <---------ARR14(2) ------>ANAC58   --------->ANAC58              ---------->DOF2    <---------CCA1(2)  <---------AGP1<- ------>ANAC46   --------->ANAC46       --------->ZAT18 --------->ARR14(2)           <---------ARR11(3) ------>AtLEC2   --------->ANAC58  ---------->DOF2     <------ZmHOX2a(1)             --------->ARR11(3)   atgcaactttttcaaactcaagaaacagagaatattcaaaagttcacaaaaaagagaggatttgttttctatcttatcccttacaaggatctcgaacggt  28696200                --------->ANAC58                --------->O2                <---------TGA1a         <---------ZAT14         --------->REM1(2)                          <-----------GT1                        >>>>>>>>>>         --------->ZAT14                          <---------ATHB12          <---------ARR11(3)        --------->ALFIN1                     --------->ANAC58               --------->ARR11(3)     <- --------->AtLEC2                            --------->ANAC58     --------->ANAC46   <----------DOF2 --------AtLEC2 ======================================bZIP_DOF ----------->RAV1(1)  <---------ANAC58 -----ARR14(2)  <---------O2               ---------->DOF2  ------>ZmHOX2a(1)       <---------ANAC58 ---->ARR14(2)  --------->ANAC58     --------->ANAC58     ----------->RAV1(2)  <----------DOF2     <- --------ANAC46 --------->TGA1a      --------->ANAC58     =================RAV<---------DAG2       <-   tccatggacagtgtagccacgagagagaagaaacttgacgagccatgaagcaataaaccctcctgcaccagtaacacagaccttttgctttacagccatt  28696300                                                                       <---------AHL20(2)                                                               ---------->DOF2                                                          <---------ARR11(3)                                             ---------->DOF2------>ZmHOX2a(2)                                           *TSS           --------->ARR14(2)         <----------DOF2                   --------->ANAC58--------->GLK1(1) <------NtERF2                          --------->ZAT18   <---------AGP1 <---------CCA1(2)                      <---------ZAT14   --------->ARR11(3) >>>>>>>LFY                          <---------ANAC46     <---------ARR14(2)                     ---- --------ANAC58                 <----------DOF2          <---------CCA1(2) --------->ANAC46    <----- --------ANAC46               <---------------AGL15 <---------ZAT14  <-----------TBP  <---------At4g35610 --------ANAC58          <------ZmHOX2a(1) --------->ANAC58<------ZmHOX2a(2)          --------->At4g35610   ggcgtctctctctttagcaacttaataggatgctctttggagtgaacgaaagagaacacagatctcaaagtatttatacacaagtctcatctgattttaa  28696400                    <---------ANAC58                    <---------ANAC46                 --------->ATHB12                    <---------ANAC58                 <---------ICU4             --------->AHL20(2)                     --------->ICU4      --------->TOE2(3)                             <---------YAB1      <----------DOF2     <---------AHL20(2)      ---------->DOF2                --------->AHL20(2) ----->MYB46(3)     ----------->GT1      <---------TOE2(3)             <-----------GT1            --- ------GT1 --------->TOE2(3)             <---------YAB1            <---------GLK1(2)           ------   caactcatctttaacttaaatagcgtataaatttgagggaattaagcttggataaagattgcaagttcagattttacagacattgaaatatttcatgaat  28696500                                                                                       --------->YAB1                                                                                       ------>ZmHOX2a(2)                     ---------->DOF2                                                 <---------ARR11(3)                 <---------TOE2(3)                     --------->ARR11(3)            --------->ARR11(3)               <---------AHL20(2)                --------->YAB1                    ------>ZmHOX2a(1) ------>AHL20(2)---------->DOF2           --------->ANAC58            <------------------------ANAC81 ->TEIL        --------->AHL20(2)         --------->ANAC58      ---------->ID1 <-----------GT1     --   ttttatatcgaaggaaattaaagaaaagaaattcaagttttgttaagcaattcataagatttgtttgtttttttttttttttttcctgatcttaattcat  28696600                                                                                                 ----                                                                                                 <---                                                                                          --------->GLK1(1)                                                                                          <---------GLK1(1)                                                                                        <---------ICU4                                                                 <----------DOF2        --------->YAB1                                                                --------->HSFC1(2)      <--------ATHB1                                                                <---------HSFC1(2)      --------->ATHB12           --------->ANAC58                           <---------MYB59                  --------->ICU4           --------->ANAC58  ------->TEIL     <-----------HVH21 <---------HSFB2a(1)    <---------YAB1      ------->TEIL        --------->AtLEC2 <---------At5g28300  --------->HSFB2a(1)    <---------ATHB12 ------->ARR11(3)      <---------YAB1  --------->ANAC46    --------->YAB1            --------->YAB1   atatcatgtactcaagaaaactcttatcatgcacatagcataagtcactgtcacagcctaattagaactttcttagaaatcgatctacaatgatttccac  28696700                                             --------->ARR11(3)                                             <---------ARR11(3)                                   <-------TEIL                                  --------->CCA1(2)                                 --------->ARR14(2)                     >>>>>>>>>>GT-3b     ---------->DOF2                                 <----------DOF2       <-----------GT1          <------ZmHOX2a(1)            --------->YAB1              <---------DAG2 --->MYC3         ----------->GT1<---------ARR14(2)         <---------YAB1            <---------ALFIN1 ----MYC3--------->ANAC46     <---------TOE2(3) <----------DOF2                   <-----------HVH21<-   atgtgaattttacacaagtgaagaaaaatatgaaggatacagagaaagaactttgaatttttatcatgaacaatagtctaacacagtcacacttttttct  28696800  Previous    Next  AGI:  At1g76470.1    Description:  cinnamoyl-CoA reductase. similar to cinnamoyl-CoA reductase family [Arabidopsis thaliana] (TAIR:AT2G33590.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40693.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 28694664    to: 28696343    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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