Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->MYB52(1)                                                  ---------->DOF2                                                 --------->AtMYB61                                                 ------->GAMYB                                                --------->MYB46(3)                                        --------->ANAC58                                            <              --------->ANAC58          --------->ANAC58                                           <-     --------->YAB1         --------->AtLEC2   --------->ANAC58                                    --     --------->TOE2(3)    <---------ANAC58     --------->ANAC58    <---------YAB1                  ==     --------->TOE1(3)    <---------ANAC58   --------->MYB46(3)    --------->ICU4           <--------   -------->P --------->ANAC58        ---------->DOF2   --------->At4g35610                 ========= >GLK1(2) --------->ZAT6  <---------ANAC46 --------->RAP2.6(2)--------->ANAC46      <-------TEIL-----   agactaaccataacacaagaacgtcgagtcgtgcaaacagagaagccacaaccaaaggagctaaacaccatgatcaagagactaagtccatagactttac  28686500                                                  <------NtERF2                                              <---------ATERF1(1)                                             <---------DEAR3(1)                                         ------>MYB46(1)                                         --------->MYB52(1)                                         ---------->DOF2                                        ----------->HVH21                                       <---------MYB46(2)                                       <---------MYB59   ----------->HVH21               --------->WRKY12  --------->SPL7                   ----------->HVH21 ---------SPL7                   <---------At4g35610 --------TGA1a           ---------->DOF2--------->MYB55(1) ------->TGA1a         --------->MYB46(3)------>MYB83             <---------ANAC58 ===================================bZIP_DOF<---------LBD16       <---------ANAC55(2)        <------- --DOF2   <-----------HVH21      --------->ZAT2  ------>NtERF2    <---------ANAC46        --------->ARR14(2) ========bZIP_DOF      XXXXXXXXXXXXXXXXXXXX>MIR169H-N             <---------ANAC58        <---------ARR14(2) ---->ANAC46  <---------ANAC55(2)--------->At4g35610              --------->ANAC55(2)   <---------MYB46(3)   gacgtccgactcggtcacctaagtaaccaaagatgagctgacctaacgcggtgccaagaagagcgattgcgtaagaagttgagagaagagcggttccgat  28686600                                                                     ----------->GT1                                                                     <---------DEAR3(2)                                                                    <---------At1g77200          <---               <---------AHL20(2)                                 <-----------HVH21             -----              --------->AHL20(2)                                 <---------ANAC58              <-----              <---------AHL20(2)                                 <---------ANAC58         ------>NtERF2              <---------ARR11(3)       ------>ZmHOX2a(2)    <---------SPL7---------->DOF2--------->DEAR3(1)              <---------AHL20(1)    --------->ATHB12       ------>ZmHOX2a(2)           --------->LBD16              --------->ARR11(3)   <---------YAB1         <------ZmHOX2a(2)            ------>NtERF2              --------->AHL20(1) --------->YAB1          --------->ARR11(3)          <---------LBD16   <----------DOF2         --------->YAB1                <---------ARR11(3)    <-----------------AGL1 --YAB1 ----------->GT1   <---------YAB1             ---------->DOF2<---------DEAR3(1)<---------LBD16   tgagtctttgtggtaatatatttgacttatcattttcatgatcggagctatacagaaaagatcgtatgcgtcggtgaaaagtcccattccggcgactatt  28686700                               <---------ANAC58                              ------>NtERF2                                                        <-                         ------>ZmHOX2a(1)                            <---------ANAC58             <-                     <---------ARR14(2)                         <------NtERF2                     ---                     --------->ARR14(2)                     ------>NtERF2                         ---                     ------->TEIL                           --------->LBD16                      ----  <----------DOF2   <---------CCA1(2)        --------->YAB1--------->ANAC46                      <--- --------GT1   <---------ALFIN1<---------ANAC46    --------->TOE2(3)  <---------ANAC46           ---- ---->YAB1   >>>>>>>>>>>>>>>>>LFY  ----------->HVH21      <---------LBD16          <---------TOE2(3) ----YAB1<---------------AtSPL3<---------ANAC58    --------->TOE1(3)  <---------ANAC58     <---------   atcgctttgaaatggtaccactgtatcctcgctgcgtctaacgccgataataaacttaactccggcatcgtttcgtcgattttttaagaattttttcaag  28686800 --------->LBD16                                                                                  <-- ------TEIL                                                                                 <-------- --------LBD16                                                         <----------ID1     <----------DOF2 ------>CCA1(2)                                                 <---------YAB1           *TSS <<<<<<< ------>ARR14(1)                                             <-----------GT1         --------->KAN4(1) ----->ARR11(1)                                          <---------CCA1(1)           <---------KAN4(1) ------ARR14(2)                                          <---------RVE1(1)          ---------->TaMYB80 ----->ARR14(2)                                         --------->ARR11(3)          <---------KAN4(2) --GT1  --------->YAB1                                  <---------ARR11(3)   <---------ARR14(2)  ----   atacggagaatgagaacaatagaagtctttgtatttttcatttgaatgtgtttttggagattttttcttattggagacaaatatggaatatgctttggtt  28686900                       <---------TOE1(2)                       --------->LBD16                      <---------LBD16                      --------->LBD16                     ----------->RAV1(2)                    ------>MYB83 <---------ZAT14                                                    <                    ------>MYB46(1)                                                             <----                  --------->AtMYB61        --------->MYB52(2)                                   -----            --------->ANAC46     --------->ZAT18                                               <-----       ============================HOX2a_HOX2a                       <---------AHL20(2)        <-----       <------ZmHOX2a(1)    ------>ZmHOX2a(2)              <---------DAG2                      ------ -------WRKY18(1) --------->DEAR3(1)    <----------DOF2    <----------DOF2                     <----- -AtMYB61 --------->ANAC58<---------ARR14(2)  --------->WRKY12      --------->AHL20(2)        <------ <<<MYB80 --------->ANAC58--------->ARR14(2)<---------At4g35610<-----------TBP           <---------AHL20(2) ------->HVH21 <---------ALFIN1  <---------ZAT18  <----------DOF2--------->YAB1--------->YAB1<-------   tgactgtgaggaacacaacacctccctggatcgagtccacttctttagttgactttgacaactttatttataaaatttggattataagttttaaatttcc  28687000 ----------DOF2                          --------->GLK1(2) -----------AGL15                        <-----------ARR10 ---------->AGL15                        <---------ARR14(3) ------------AG                          --------->ARR14(3) <---------ANAC58 ------------AGL1                        <---------ARR11(3) <---------ANAC46 ----------->AGL1                        --------->ARR11(3) <---------ANAC58  <----------DOF2 ------------AGL2                <---------WOX13(1)      <---------ARR14(2)   <---------DAG2 -----GT1                      --------->ATHB12          --------->ARR14(2) <-------TEIL           -- ----GT1                      <---------YAB1  ----------->GT1  <-----------HVH21                   <-   ctctttggtacaaagagttttagttgtaagatgtgattgccaaaatcttggttaaaacagttccgtttcacatcaaggtgctttttttcagagtctaaga  28687100                --------->ATHB12               <------ZmHOX2a(2)               <---------YAB1             <---------ARR14(1)            --------->LBD16          <---------LBD16                         <---------HSFB2a(1)                               <         --------->MYB52(1)                       <---------KAN4(1)                                 <        <---------ARR14(2)                        --------->HSFC1(2)                               <<        --------->ARR14(2)                        <---------HSFC1(2)                --------->AtMYB61       ===============HOX2a_HOX2a                 --------->KAN4(1)          --------->ARR14(2)    <<       <------ZmHOX2a(1)                        <<<<<<<ZML2                  <---------ARR14(2)    <<     <---------TOE2(3)               ---------->DOF2         <-----------ARR10  <---------ETT(1)   <- ------->ARR11(3)                  --------->ANAC46--------->KAN4(2)    <---------At4g35610       --- --------ARR11(3)                --------->ANAC46 --------->HSFB2a(1)   --------->At4g35610      <---   acatcttaaggaaccggatcattggacatggttctacacaaaagaaactagaacattcttgagtctctaacctctgctaaatccgaccaaagacttacag  28687200                                          <---------MYB46(3)                                       <---------ANAC46    --------->At4g35610                <---------ANAC58   <---------ALFIN1                    <---------ANAC58 <------NtERF2                      <---------GLK1(1)                                      <---------WRKY18(1) ---------DEAR3(2)                  --------->GLK1(1)                                   <---------ANAC58 ---------ATERF1(1)                --------->ARR14(2)                                   <---------ANAC58 <<<<<<<<DREB1C                    --------->ARR11(3)                                  --------->ZAT2 <<<<<<<<DREB1B                    <---------ARR11(3)                                  <---------ZAT2 <<<<<<<<DREB1A                    <---------ARR14(2)  <---------LBD16         <---------ALFIN1 --------DEAR3(1)               <---------ANAC46  --------->YAB1              --------->ZAT14 ------>RAP2.6(3)          <---------AtLEC2<-------GAMYB --------->LBD16      --------->ZAT18       - --------HVH21     <---------YAB1 <------ZmHOX2a(1)   --------->MYB52(1)      <---------ZAT18  <-----   gtcggccactgcaactaaatgctgattaagcatggaggatatcgtggttgaatgaaaaccggaactatgaagttgggatgcgcactccgagcttgactac  28687300                       --------------->AGL15                      =================HOX2a_HOX2a                      ----------------->AGL3                      ------>ZmHOX2a(2)                      ================================HOX2a_HOX2a                     =================================HOX2a_HOX2a                    <---------AGP1                           --------->LBD16                    <---------ARR11(3)                      --------->LBD16                    --------->AGP1                          <---------HSFB2a(2)                    --------->ARR11(3)                      --------->ANAC58                    <---------ARR14(2)          <---------ARR11(3)                    --------->ARR14(2)          <---------ARR14(2)                   <---------CCA1(2)            --------->ARR11(3)            ------>ZmHOX2a(2)                   --------->ARR14(2)            ===========================HOX2a_HOX2a      <-----------HVH21           ============================HOX2a_HOX2a <---------ALFIN1           <------ZmHOX2a(2)                   <------ZmHOX2a(1)          <---------ARR11(3)             --------->ANAC58   --------->ANAC58          --------->ARR11(3)             --------->ANAC58   --------->HSFB2a(2)          ============          --------->ARR14(2)    =========================HOX2a_HOX2a            <---------TOE2(3)          <---------ARR14(2)    ========================HOX2a_HOX2a          <---------WOX13(1)<-----      ---------->DOF2<------ZmHOX2a(2)  --------->TOE1(2)  <---------LBD16 --------->ATHB12    ------ ----->NtERF2  <-----------HVH21<------ZmHOX2a(1)<------ZmHOX2a(2)        <---------YAB1 <-----------RAV1(2) ----------------WRI1==================HOX2a_HOX2a------>ZmHOX2a(2)     --------->ANAC55(2)   -------   gacgacttcaaagatcccatcagatctaaaattaggagaaaacaagcgaggatccacttgtcccggaagattaaacgtgattgagaatggaccaggcgga  28687400  Previous    Next  AGI:  At1g76430.1    Description:  phosphate transporter family protein. Identical to Inorganic phosphate transporter 1-9 (PHT1-9) [Arabidopsis Thaliana] (GB:Q9S735); similar to phosphate transporter family protein [Arabidopsis thaliana] (TAIR:AT1G20860.1); similar to General substrate transporter [Medicago truncatula] (GB:ABN06033.1); contains InterPro domain Major facilitator superfamily MFS-1 (InterPro:IPR011701); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Sugar transporter, conserved site; (InterPro:IPR005829); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 28683829    to: 28686889    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g76440.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G20870.1); similar to small heat shock protein [Nicotiana tabacum] (GB:BAF45120.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20 (InterPro:IPR002068) Range:  from: 28687041    to: 28688644    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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