Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <---------                                                   <---------ANAC58                       <---------YAB1                                                   <---------ANAC58                     <---------ICU4                                                  <-------TEIL                         --------->ICU4          ---------->DOF2        <----------DOF2<-------MYC3                     <---------ICU4  <---   ------>MYB46(1)           --------->MYB46(3) <-------MYC2       <---------ANAC46   <---------ANAC55(2)   --------->MYB52(1)      --------->MYB52(1)   ------->MYC2       <---------ANAC58   --------->ANAC55(2)   ------>MYB83            <---------ALFIN1     ------->MYC3       <---------ANAC58 <-----------GT1-- <---------MYB59     <------ZmHOX2a(1)    <-----------GT1         ---------->ID1<---------MYB52(1) --   aaacctaatggaaaaagagaataggagcccaacggctatatttgtaaccatgtgcgtttttcaaatttggcttattttcttcgttattacttattactac  28635700                                                          ------->GAMYB                                                         --------->MYB46(3)                                                        -------->P                                                        ------>MYB46(1)                                                        ------>MYB83                                                       --------->MYB52(1)                                                      --------->AtMYB61                                                      --------->DEAR3(1)                                                      <---------MYB111(1)                                                      <---------MYB111(2)                                                      <---------MYB46(2)                                                      <---------MYB55(2)                                                      --------->MYB46(3)                                                      <---------ALFIN1                                                     --------->MYB46(3)                                                   --------->AtMYB61                                                  <---------MYB55(2)                                                 ------>MYB46(1)                                                 ------>MYB83                                                --------->ORA47(1)               --------->TOE2(3)                                               --------->DEAR4(1)             --------->WOX13(1)                                               <---------MYB55(2)         --------->ANAC58                                               --------->DEAR3(1)    <---------ICU4                                               <---------MYB46(2)    <--------HAHB4     --------->AHL20(2)                         <---------WRKY12      --------->DREB2C(2)   --------->ATHB51   <---------AHL20(2)                         <---------WRKY38(1)   --------->MYB46(3)   <---------YAB1      <---------YAB1                        --------->WRKY18(1)   --------->DEAR3(2)  <---------ICU4 >>>>>>>>>RAP2.2 --GT1     ---------->DOF2      <---------AHL20(2)--------->MYB46(3)--------->ICU4     --------->TOE2(3) ------ALFIN1        <---------ATHB12       <-----------GT1      ------>ZmHOX2a(1)   --------->ICU4 ------->ANAC58 >>>>>>>>>>>>>>>>>LFY      <-----------HVH21     --------->TOE2(3)--------->YAB1 ------->ANAC58 <<<<<<<<<<<<<<<<<LFY <---------AHL20(2)--------->MYB55(1) --------->ANAC58  <--------   cacgctcaagtctcaaaggtccaatggtcaatgttttatttcaatgtcaccgaccaccaaccgcttcctcattattaagccaatctaaatattaatacca  28635800                                                                                 <---------YAB1                                                                 <---------AHL20(2)                                                                <---------AHL20(2)                                              <-----------GT1   --------->AHL20(2)                                         --------->ICU4    --------->AHL20(2) --------->GLK1(2)   ---                                         <---------YAB1    <---------AHL20(2)<---------GLK1(2)    <--                                       <---------ICU4  <---------YAB1        <---------ARR14(2)  ----    ----------->HVH21                 --------->ICU4<---------ARR14(2)       --------->ARR14(2)  ---- ---GT1                               <---------YAB1--------->ARR14(2) <-----------GT1 --------->AHL20(2)   gtcgatttgaccccaaaacaaaaaacaaaacttagaccacattattattaacccaatctgataaattttaattttacccgattctgatttttaatactca  28635900                                                          ---------->ID1                                                      <---------DAG2                         --------->TOE2(3)            <----------DOF2                         --------->TOE1(3)           <---------ANAC58                         --------->TOE1(2)     <----------DOF2            <---------AHL20(2)                 <---------DAG2    <-----------GT1                  <--            --------->AHL20(2)                <---------DAG2   <----------DOF2                 <----- ------>STY1(2)       <-----------GT1         <----------DOF2------>ZmHOX2a(1)                 <----- -------STY1(2)<---------ARR11(3)     <-----------ARR10   <-----------GT1                 <---------MYB52(1) ----->ANAC58  --------->ARR11(3) --------->RAP2.6(3)<---------ANAC58            <---------MYB52(1) ----->ANAC58 <---------CCA1(2)  --------->MYB52(1)<-----------GT1     <----------DOF2<----------DOF2   agctagtagatgatttaaatctttaaaccttagactaacggctcttcgcctttttgctttttcctctttacatctttttctccagtagctttgttagtca  28636000                                                                   --------->ATHB12                                                                  ------>ZmHOX2a(1)                                                              --------->ARR11(3)                                                              --------->ARR14(2)                                                              <---------ARR14(2)                                                         ------------>CBF                                                     --------->ANAC46                              --             ----------->GT1                        --------->RAP2.6(3)                           <--            <---------TOE2(3)                     --------->ARR14(2)                              <--          ---------->DOF2                         <---------ARR14(2)                              ---      ----------------->AG                     ------------>CBF   --------->ICU4        <---------ARR11(3)      ----------------->AGL1                  <-----------------AGL1                    <---------AHL20(1)      ==========================================================MADS_MADS      --------->MYB59  ----- -------ALFIN1                                ----------------->AG<---------YAB1        --------->AHL20(1) ----WRKY38(1)  ----------->GT1               ----------------->AGL1       <---------ZAT6   --------- ----WRKY45 --------->DAG2  ---------->DOF2 <-----------GT1   <---------ARR11(3)   ------------>CBF--   acacattttccaaaaaggttgaaaataagtcaaagtacaaactgaattacccaatacggcccaatatcctgattagagagttaggcccaatatatcatca  28636100                                                                  <----------DOF2                                                                <------ZmHOX2a(2)                                                               <---------ARR11(3)                                                               <---------ARR11(1)                                                               --------->ARR11(3)           --------->ANAC58                                    <---------AGP1           --------->ANAC58                                    --------->ARR14(2)  ------------>CBF                                             <---------ARR14(2) ------->GLK1(1)                                              <---------CCA1(2) -------ARR14(2)                                              <---------ARR14(1) -------GLK1(2)                                 ========================HOX2a_HOX2a ------>ARR14(2)                                ------>ZmHOX2a(1)------>ZmHOX2a(2)           ------->TEIL ------>ARR10    --------------------->WRI1     =======================HOX2a_HOX2a     --------->ICU4 >YAB1 --------->YAB1             <---------TOE1(2)          --------->LBD16      --------->LBD16  -- ------->CCA1(2) <----------DOF2 *TSS   <-----------GT1    <---------LBD16      <---------LBD16    <-   gatttgcaatcgcaagtctctttcaacttctcgtcgaatgttatactctcctcagagtttctccggatctttcaaaaacaattccggtgaagatgaatca  28636200             <----------DOF2                                                          <---------GLK1(2)        <---------ANAC58                                                      <-------TEIL        <---------ANAC58                                                    >>>>>>>>>GATA-1        <---------ANAC55(2)    <---------GLK1(1)      ------>ZmHOX2a(2)     <---------ARR14(2)        --------->ANAC55(2)<---------ATHB12          <------ZmHOX2a(2)      >>>>>>>>>GATA-4 <---------ANAC46   <-----------GT1                 --------->ARR14(2)      >>>>>>>>>GATA-2 ------->ZAT14     <<<<<<<<<MYB98                   <---------ARR14(2)      >>>>>>>>>GATA-3 --------ZAT14  <---------TOE2(3)              <-----------GT1         <---------ANAC46   gttctgtgattcgtgatttatgttactcaatcgatttctcatgttatagtcaccgatctgtatcgaaattttggtgtggattcatcaagcttctcaaatg  28636300                                                               <---------GLK1(1)                                                               --------->GLK1(1)                                                              --------->ARR14(2)                                                      <---------MYB46(3)                                 ---------->DOF2      <------MYB83                   <---------ANAC58                   <------MYB46(1)                   <---------ANAC58                   --------->MYB52(2)                    <--------                   --------->ANAC55(2)               <---------AtMYB61                 <------ZmHOX2a(2)                   <---------ANAC55(1)              <---------MYB52(1)                <---------ARR11(3)                   <---------ANAC46       ------>NtERF2       <---------ARR14(2)      --------->ARR11(3)                   <---------ANAC55(2)   --------->ANAC46  --------->HSFB2a(2) --------->At4g35610                  <-------TEIL<---------HSFB2a(2)  <-------GAMYB            <---------At4g35610   <---------HSFB2a(2)<---------ARR14(2) --------->ANAC58  <---------HSFB2a(2) <---------At4g35610   --------->HSFB2a(2)--------->ARR14(2) --------->ANAC58 <---------LBD16   --------->At4g35610   --- <---------------------WRI1   --------->HSFB2a(2) <---------MYB46(3)     ---------->DOF2    ---------   gagttcgagactcacgaagatgcgtatttgttctacaaagactacgccaagtccgttggtttcggaactgcgaaattaagcagccgaagatcaagagctt  28636400                                         --------->ANAC58                                         --------->ANAC58                                     <---------ANAC55(2)                                     --------->ANAC46                                --------->ANAC46                                                    -                                --------->ANAC58                                                    -                                --------->ANAC58                                           ------>ZmHOX2a(2)                   --------->ARR14(2)--------->ANAC58     ----------->HVH21              <---------ARR14(2)    <---------GLK1(1)     ------>ZmHOX2a(1)       --------->MYB46(3)     <---------STY1(1)<------ZmHOX2a(2)    --------->GLK1(1)   ----------->RAV1(2)  --------->ANAC58--------->ANAC55(2)         --------->ARR14(2) -ARR11(3)         <---------ARR14(2)--------->ANAC58     ----------->TGA1           ------>ZmHOX2a(1) ------->DOF2      <---------GLK1(2)<---------LBD16     --------->At4g35610 <---------ARR11(3)    --- >ARR11(3)    ------>NtERF2    --------->SPL7--------->ANAC58<---------ANAC55(2)     =============HOX2a_HOX2a   caaaggaattcatcgatgccaaattctcctgcatacgctacggaagcaaacaacaatccgatgacgcgataaaccctagagcttctcctaagatcggatg  28636500                                                                             <----------DOF2                                                                            ------>ZmHOX2a(2)    <---                                                                           <------ZmHOX2a(2)     ----            ----------->GT1                 --------->DOF5.7(2)           <---------ARR11(3)    <----           ------->TEIL                  <-------TEIL  <-----------HVH21  --------->ARR11(3)    -----          <---------AtLEC2           <---------------AtSPL8           --------->YAB1       <---------At4g35610 -------->ANAC58                     <---------------AtSPL3        <---------ICU4          <---------ZAT2 -------->ANAC58                     --------------->AtSPL3     --------->YAB1            --------->ANAC58 ------->DOF2             <-----------RAV1(2)         <---------ANAC46<-----------GT1     --------->ANAC58   caaagcaagtatgcatgtaaaacgaagaccagatgggaaatggtacgtttacagtttcgtcaaggagcataatcacgatcttttaccagagcaagctcat  28636600  Previous    Next  AGI:  At1g76320.1    Description:  FRS4 (FAR1-RELATED SEQUENCE 4); zinc ion binding. similar to FAR1 (FAR-RED IMPAIRED RESPONSE 1) [Arabidopsis thaliana] (TAIR:AT4G15090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41786.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74344.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41954.1); contains InterPro domain Zinc finger, PMZ-type; (InterPro:IPR006564); contains InterPro domain Zinc finger, SWIM-type; (InterPro:IPR007527); contains InterPro domain FAR1 (InterPro:IPR004330) Range:  from: 28636133    to: 28639018    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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