Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <---------ZAT2                                ------>ZmHOX2a(2)                               --------->At4g35610                  <---------GLK1(1)      --------->ZAT2                  --------->GLK1(1)      <---------At4g35610                 <---------ARR11(3)      --------->At4g35610                 --------->ARR14(2)    <---------ALFIN1           --------->ANAC58    <---------At4g35610           --------->ANAC46   --------->ARR14(2)         <---------DOF5.7(2)  <---------ARR14(2)                  <---------ATHB12       --------->DOF5.7(2)<------ZmHOX2a(2)              ------>ZmHOX2a(2)     <---------ANAC58    --------->ARR14(2)             <------ZmHOX2a(2)     <---------ANAC46    <---------ARR11(3)            ------->TEIL     <---------ANAC55(2) <---------ARR14(2)            <---------ARR14(2)           --------->DAG2     <---------ANAC58<-----------GT1 ------>NtERF2     --------->ARR14(2)      --------->ETT(1)<----- ---GLK1(1)--------->ANAC58------>ZmHOX2a(2)     <---------MYB52(1)--------->YAB1  ---------->DOF2   cagcatttcgtgaacgccagatatcacgatctgatctgcctccagctctctgttatggatccaactaaatcatcaaataggtcggaaaagtttcaaactt  28621200                                                                                                -----                                                                                   ================HOX2a_HOX2a                         --------->LBD16                                           ===============HOX2a_HOX2a                        --------->ANAC46                                           <------ZmHOX2a(1)                  ------>MYB83                          <---------ICU4        --------->ALFIN1 ------        ----------->GT1<---------LBD16             ------>ZmHOX2a(2)         <-------MYC3      <-----        --------->YAB1--------->MYB52(1)     --------------------->WRI1      ------->MYC3   ------>ZmHOX2a(2)       ----------->GT1-------->P             <----------DOF2                <---------ANAC46=========       <---------YAB1--------->MYB52(1)  <---------CCA1(2)             <---------SPL7      ==========     --------->YAB1<---------MYB52(2)----------->RAV1(2)--------->ATHB12    >>>>>>>>CAMTA3 <------ZmHOX2a(2) -----DOF2        ------>MYB46(1)  <---------GLK1(1)   <---------YAB1 <---------MYB52(2)  <---------ARR14(2)   tagcgaagaatgataaaacccactaaccggaatatggaaacctgtagctttgatcgcatcattggatgagtagcgaacgcgtggaggaaggcgatcggaa  28621300          <------NtERF2        --------->ALFIN1        <---------DEAR3(1)       --------->ATERF1(1)       <------NtERF2     <---------DEAR3(1)     --------->ALFIN1    <------ZmHOX2a(1) <---------LBD16 <-----------RAV1(2) --------->HSFB2a(2)                                                                        <-------GAMYB <---------HSFB2a(2)        --------->DAG2                                       ----------->HVH21 ---->ARR14(2)    ---------->DOF2                                <---------DOF5.7(2)    ------------>AtMYB77 --->ARR14(2)  --------->ANAC58                             <------NtERF2       --------->ATERF1(1) ----GLK1(2)   --------->ANAC58                           <---------DEAR3(1) <------ZmHOX2a(1)<------ ==========HOX2a_HOX2a     ---------->DOF2              --------->CCA1(2)<------ZmHOX2a(1) <---------MYB46(3) ==========HOX2a_HOX2a----------->GT1       <------ZmHOX2a(1)  --------->DOF5.7(2)--------->MYB52(1)   tctccaggaggcggagcaaggaaagagagaaaagcgaagagaatgaggagagatagagagacggcgataacgagaggaaggagacgacggagacggttgt  28621400                                            <---------MYB111(1)                                            <------------MYB.PH3(2)                                            --------->MYB46(3)                                            <---------MYB52(2)                                            <---------MYB46(2)                                       --------->AtLEC2                                     --------->DEAR3(1)                                     <---------ANAC58                                     <---------ANAC58                                     <---------ANAC46                                    <------NtERF2                                   <---------RAP2.6(3)                                   <------NtERF2                                   <---------ATERF1(1)                                   ------>NtERF2                                  <---------DEAR3(1)                                  --------->DEAR3(1)                                  --------->RAP2.6(2)                                  --------->RAP2.3(2)                                 --------->SPL7              --------->DEAR3(1) --------->ERF1             <------NtERF2       --------->ATERF1(1)            <---------ATERF1(1)  --------->RAP2.3(1)            ------>NtERF2       --------->DREB2C(1)            --------->ABI4(1)   ------>NtERF2           --------->RRTF1(3)   --------->At4g35610           --------->ATERF1(2)  <------NtERF2           --------->DEAR3(1)   --------->ATERF1(1)           <---------ATERF1(2)  <---------ATERF1(1)           --------->RAP2.3(2)  <---------At4g35610           --------->RAP2.3(3)  <---------DREB2C(1)           --------->RRTF1(2)  ------>NtERF2<---------MYB111(2)           <---------DEAR3(1)  <---------ATERF1(1)          <------NtERF2        <---------ERF1          --------->ATERF1(1)  <---------SPL7------->GAMYB          --------->RAP2.3(1)  <---------RAP2.3(1)          --------->RRTF1(1)  <---------DREB2C(2)          --------->ERF1      <---------RRTF1(2)          --------->ORA47(2)  <---------ATERF1(2)          --------->RAP2.6(1) <---------DEAR3(1)          --------->DEAR4(2)  --------->ATERF1(2)         <---------ATERF1(1)  <---------RAP2.3(2)         <---------RAP2.3(1)  <---------RRTF1(3)       <---------ABI4(2)      <---------ANAC58       --------->ATERF1(1)    <---------ANAC58-------->P       --------->CCA1(2)      <---------ATERF1(1)     <---------RAP2.3(3)             <---------ARR11(3)     <--------P               <---------RAP2.6(2)     <---------ZAT2     --------->ALFIN1   <-------TEIL--------->ATERF1(1)       --------->ARR11(3) ---MYB46(3)--------->LBD16  --------->RAP2.6(3)      --------->ZAT2                    ---------->DOF2   agtaagggtagcgccgccgatggaaattcatggcggccgccgtgcaactacctcgctgctcggagatatagagagattgagagagagaatgaaagtttgg  28621500                                                                                        <----------DOF2                                                                                  <---------GLK1(2)                                                                                  --------->ARR14(2)                                                                         --------->ANAC58                                              ---------->DOF2            --------->ANAC58         ---------->DOF2   <-----------GT1 --------->YAB1    <------ZmHOX2a(2) --------->YAB1   atttttggaatcaaagcatgttgaaaatgttactgtatttgagaatcacaaagcattgtttcgatcacgagagacaaacaacaatattctcttttcttca  28621600                                                                                                 <---                                                                                                 ----                                                                                                 ----           --------->At4g35610                                                    --------->GLK1(2) -           <---------YAB1                                                      ------------>CBF -----         --------->YAB1                         <---------ZAT18               --------->YAB1 --------       <---------ARR11(3)        *TSS<----------DOF2              --------->GLK1(1)      <---------AHL20(2)   --------->YAB1               <---------GLK1(1)      <---------YAB1         <-----------GT1--------   aacaaacaaaatcatcagagagagagagaaattgagttcctttgtttttgagcacttcttatagagaggtttccatcttattacaatctgtttaataaaa  28621700                                        --------->AHL20(1)                              <--------HAHB4                              <---------ICU4                              --------->ATHB12  <---------MYB52(1)          --------->ATHB51 ------ARR11(3)               --------->AHL20(2)                                                    - ----->GLK1(2)                <---------AHL20(2)                          --------->DAG2         ---- ----->ARR11(3)               -------->ATHB1                             ---------->DOF2         <--- ---------->GT1              <---------ATHB51  <---------ANAC58 <---------TOE1(3)             ------- ---->RVE1(1)                --------->ICU4    <---------ANAC58 <---------TOE2(3)             ------- ->AHL20(2)     <----------DOF2         <---------AHL20(1)<---------------AGL15           --------->YAB1 ->YAB1  <---------YAB1  ------------>CBF     --------->At4g35610----------->GT1--------->ICU4<------   atctgttaattttgatgacttttgactaacaattatttgatatatattagcttacattatacatttagggtaaaataaagcaaagattaatatcaaaatc  28621800          <---------ATERF1(1)       <------NtERF2      ------>NtERF2     --------->bZIP60(1)     <---------RAP2.6(2)     --------->ATERF1(2)     <---------ATERF1(2)     <---------bZIP60(1)    --------->RAP2.6(3)                                               <-------GAMYB   --------->MYB52(1)                                                ----------->GT1  ----------->TGA1                                                  --------->MYB59         <-------- -------->YAB1            <---------AHL20(2)                 --------->ANAC55(1)            --------- ----->TOE2(3)   <------NtERF2                               --------->ANAC58          <---------MYB46(2) -------DOF2    ----------->RAV1(1)                          <---------ANAC55(2)       <---------MYB59 -->ARR11(3)  <------NtERF2    <-----------GT1               --------->ANAC58    --------->ARR14(2) -->GLK1(2)   --------->At4g35610        <---------AHL20(2)  --------->ANAC55(2) <---------ARR14(2) ---ARR11(3)  <---------At4g35610    <---------ZAT6          --------->ANAC46    <---------ICU4------   tttaatgacggcagtcggcagcattgattttttttactagtcttaaattgagtattagcttatacgtaattcggttaaactcatatttgcctaactttag  28621900                                                                              --------->CCA1(2)                                                                             <---------ARR11(3)                          <---------YAB1                                     --------->ARR11(3)<-----                       <---------YAB1                                    ===========================bZIP_DOF                     <---------ICU4                                   --------->ANAC58      ---------                    <---------YAB1                                    --------->ANAC46    =========== --DOF2             --------->ICU4<----------DOF2                     --------->ANAC58    --------->TGA1a >TOE2(3) --------->YAB1--------->YAB1       --------->ATHB12       --------->ZAT6    <-------------- --->MYB52(2)      --------->TOE2(3)       ------->TEIL     <-------TEIL ---------->DOF2  --------->O2   ttgttatcacattgataaaaacattattatcagggcctttatatgaatcaatggaatacacatacatataacactcaaagatatatgtccccaagtcggc  28622000                                                                                                  ---                                                                                                  <--                                                                    <---------YAB1           <-------     <----------ID1                                                <---------ARR11(3)        -------- -NtERF2                                                           --------->ARR11(3)        -------- >RAP2.6(3)                                                <---------ANAC55(2)             --------->AHL20(2) =======================================bZIP_DOF     <---------MYB52(1)                    <---------AHL20(2) ---AGL1                     ---------->DOF2     <------NtERF2 ---------->DOF2       ----------->GT1   caaaaaaaaaacaaatgtccctaatagttgacaaagaagaagagaattggcctcagttattaagtaaaagataatagttagtgagtaatgtaattaagta  28622100  Previous    Next  AGI:  At1g76270.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G20550.1); similar to axi 1 [Nicotiana tabacum] (GB:CAA56570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62021.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47467.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) Range:  from: 28618101    to: 28621633    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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